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Answer: Answer: Tollaly confused about finding variants allel frequencies.
updated 19 months ago by 43k • written 8.7 years ago by 6.1k
2
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0
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2.0k
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Answer: Answer: Using Music When Silent Mutation Is Excluded In Data
updated 3.1 years ago by 43k • written 9.8 years ago by 6.1k
2
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0
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2.5k
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Answer: Answer: genome music bmr calc-covg-helper
updated 17 months ago by 43k • written 8.9 years ago by 6.1k
3
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1
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4.0k
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Answer: Answer: Protein database for TCGA MAF files
updated 17 months ago by 43k • written 8.9 years ago by 6.1k
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1
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3.1k
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Answer: Answer: TCGA database call SNP
updated 16 months ago by 43k • written 8.9 years ago by 6.1k
2
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1
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2.9k
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Answer: Answer: TCGA Wiggle files for MuSiC
updated 22 months ago by 43k • written 9.1 years ago by 6.1k
1
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1
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3.0k
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Answer: Answer: calcroicovg problem genome
updated 22 months ago by 43k • written 9.1 years ago by 6.1k
3
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2
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2.6k
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Answer: Answer: MuSiC installation on Mac, Module Genome error
updated 22 months ago by 43k • written 9.1 years ago by 6.1k
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0
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2.2k
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Answer: A: Genome MuSiC calcRoiCovg crashing
9.2 years ago by Cyriac Kandoth 6.1k
1
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1
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9.3k
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Answer: A: Obtain MAF from VCF
9.2 years ago by Cyriac Kandoth 6.1k
2
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1
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8.6k
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Answer: A: Variant Filtration And Surprising Results
9.2 years ago by Cyriac Kandoth 6.1k
2
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1
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3.2k
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Answer: Answer: How can I look at nonsense mutations in a particular gene in TCGA data?
updated 2.1 years ago by 43k • written 9.3 years ago by 6.1k
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0
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3.1k
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Answer: Answer: Is there any database that can link the germline/somatic variant to cancer targe
updated 2.1 years ago by 43k • written 9.3 years ago by 6.1k
1
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1
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3.1k
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Answer: Answer: is needed info (BAM and MAF) files for normal tissues in MUSIC?
updated 2.1 years ago by 43k • written 9.3 years ago by 6.1k
4
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1
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4.0k
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Answer: Answer: how can I get MAF stratified by subpopulation for ASW, or CEU and YRI
updated 2.1 years ago by 43k • written 9.3 years ago by 6.1k
2
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0
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6.1k
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Answer: Answer: TCGA data gene expression
updated 2.2 years ago by 43k • written 9.4 years ago by 6.1k
2
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1
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4.5k
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Answer: Answer: The variance gene for normal people as the control set compared with TCGA gene m
updated 2.5 years ago by 43k • written 9.5 years ago by 6.1k
0
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0
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2.8k
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Answer: A: Problem in music bmr coverage
9.5 years ago by Cyriac Kandoth 6.1k
2
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0
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2.3k
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Answer: Answer: Somatic Sniper install
updated 2.2 years ago by 43k • written 9.5 years ago by 6.1k
1
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3
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4.4k
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Answer: Answer: How to determine whether a gene is present or absent?
updated 2.2 years ago by 43k • written 9.5 years ago by 6.1k
2
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2
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13k
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Answer: Answer: Help understanding the non-coding exons in a gene.
updated 2.2 years ago by 43k • written 9.5 years ago by 6.1k
1
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0
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2.0k
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Answer: A: ROI file for MuSic
9.5 years ago by Cyriac Kandoth 6.1k
2
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0
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2.9k
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Answer: A: Slow Download From TCGA
9.5 years ago by Cyriac Kandoth 6.1k
4
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1
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5.5k
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Answer: A: Tool or Script to convert MAF file to VCF ?
9.5 years ago by Cyriac Kandoth 6.1k
1
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1
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3.0k
views
Answer: Answer: Error while running vcf2maf utility
updated 2.3 years ago by 43k • written 9.5 years ago by 6.1k
2
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1
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3.2k
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Answer: Answer: Program to prioritize silent SNVs?
updated 2.3 years ago by 43k • written 9.6 years ago by 6.1k
3
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1
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26k
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Answer: A: The New Grch38 Human Genome Browser Has Arrived!
9.6 years ago by Cyriac Kandoth 6.1k
1
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0
replies
2.0k
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Answer: Answer: On what strand are the mutations shown in MAF files
updated 2.3 years ago by 43k • written 9.6 years ago by 6.1k
0
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1
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3.2k
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Answer: Answer: Problems running Genome MuSiC Play
updated 2.3 years ago by 43k • written 9.6 years ago by 6.1k
4
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1
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5.1k
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Answer: Answer: How to download a specific sample from TCGA ?
updated 3.1 years ago by 43k • written 9.6 years ago by 6.1k
1
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0
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4.1k
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Answer: Answer: VariantRecalibrator Error message
updated 2.4 years ago by 43k • written 9.6 years ago by 6.1k
3
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1
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14k
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Answer: A: Do I need to normalize level 3 TCGA data?
9.7 years ago by Cyriac Kandoth 6.1k
4
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1
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19k
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Answer: A: Vcf To Maf (Mutation Annotation Format) Conversion ?
9.7 years ago by Cyriac Kandoth 6.1k
3
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0
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2.5k
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Answer: Answer: Which result of p_value test should be chosen in Music
updated 2.4 years ago by 43k • written 9.8 years ago by 6.1k
1
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2
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2.4k
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Answer: Answer: Is Music suitable for cancers with few somatic mutations
updated 2.4 years ago by 43k • written 9.8 years ago by 6.1k
3
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1
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6.5k
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Answer: Answer: Low transition/transversion ratio: alignment or caller problem?
updated 2.6 years ago by 43k • written 9.9 years ago by 6.1k
1
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1
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3.0k
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Answer: A: How To Interpret The Output Generated By The Calc-Bmr Music By Washu
10.0 years ago by Cyriac Kandoth 6.1k
0
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1
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2.4k
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Answer: A: Error In Genome Music Path-Scan
10.2 years ago by Cyriac Kandoth 6.1k
5
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2
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4.8k
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Answer: A: Music Analysis Workflow
10.2 years ago by Cyriac Kandoth 6.1k
1
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0
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8.2k
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Answer: A: From Hg18 To Grch38
10.2 years ago by Cyriac Kandoth 6.1k
5
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1
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15k
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Answer: A: Anyone Has A Working Example On How To Run Broad'S Absolute On Exome Sequencing
10.2 years ago by Cyriac Kandoth 6.1k
1
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0
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6.6k
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Answer: A: Are There Any Tools To Convert Gatk Vcf Format To A Maf File ?
10.5 years ago by Cyriac Kandoth 6.1k
5
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1
reply
12k
views
Answer: A: Karyotypically Ordered Hg19
10.6 years ago by Cyriac Kandoth 6.1k
0
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0
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3.2k
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Answer: A: Music Path-Scan Problem
10.6 years ago by Cyriac Kandoth 6.1k
2
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2
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3.9k
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Answer: A: Genome Music
10.6 years ago by Cyriac Kandoth 6.1k
1
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0
replies
3.1k
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Answer: A: Creating A Roi File For The 1000 Genomes Project Reference Version37
10.7 years ago by Cyriac Kandoth 6.1k
1
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0
replies
2.9k
views
Answer: A: Determining The Source Of An Error In Calcbmr
10.7 years ago by Cyriac Kandoth 6.1k
3
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1
reply
3.7k
views
Answer: A: Pathway File Generation For Path-Scan Under Genome Music Using Keggrest Under R
10.7 years ago by Cyriac Kandoth 6.1k
1
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0
replies
2.2k
views
Answer: A: Mrt Analysis For Selected Genes
10.7 years ago by Cyriac Kandoth 6.1k
0
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0
replies
2.6k
views
Answer: A: Correct Reference Genome For Cosmic
10.7 years ago by Cyriac Kandoth 6.1k
124 results • Page 2 of 3
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