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Comment: C: Mutations Not Recognized in MuSiC
8.7 years ago by Cyriac Kandoth 6.1k
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4.9k
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Comment: Comment: How to get SNP genotypes in somatic mutation files with MAF(Mutation Annotation
updated 17 months ago by 43k • written 8.9 years ago by 6.1k
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Comment: C: Why the AT_covd CG_covg CpG_covd is zero???what happened with them?
8.9 years ago by Cyriac Kandoth 6.1k
2
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55k
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Comment: C: Working with MAF files (Mutation Annotation Format) from the TCGA (The Cancer Ge
8.9 years ago by Cyriac Kandoth 6.1k
0
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0
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55k
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Comment: C: Working with MAF files (Mutation Annotation Format) from the TCGA (The Cancer Ge
8.9 years ago by Cyriac Kandoth 6.1k
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1
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4.0k
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Comment: C: Protein database for TCGA MAF files
8.9 years ago by Cyriac Kandoth 6.1k
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3.1k
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Comment: Comment: TCGA database call SNP
updated 16 months ago by 43k • written 8.9 years ago by 6.1k
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3.0k
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Comment: Comment: who can give me the data of genome music bmr calc-covg
updated 16 months ago by 43k • written 8.9 years ago by 6.1k
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1
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14k
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Comment: C: calculate z-score from rpkm values.
9.0 years ago by Cyriac Kandoth 6.1k
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3.0k
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Comment: Comment: calcroicovg problem genome
updated 16 months ago by 43k • written 9.0 years ago by 6.1k
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1
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3.0k
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Comment: C: calcroicovg problem genome
9.0 years ago by Cyriac Kandoth 6.1k
1
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1
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3.0k
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Comment: C: who can give me the data of genome music bmr calc-covg
9.0 years ago by Cyriac Kandoth 6.1k
0
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1
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2.2k
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Comment: Comment: Individual Vertical Analysis from TCGA Data
updated 15 months ago by 43k • written 9.0 years ago by 6.1k
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11k
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Comment: C: problems with MAF for MutSigCV (vcf2maf)
9.1 years ago by Cyriac Kandoth 6.1k
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0
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2.6k
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Comment: C: MuSiC installation on Mac, Module Genome error
9.1 years ago by Cyriac Kandoth 6.1k
1
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1
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55k
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Comment: Comment: Working with MAF files (Mutation Annotation Format) from the TCGA (The Cancer Ge
updated 2.6 years ago by 43k • written 10.0 years ago by 6.1k
1
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0
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55k
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Comment: Comment: Working with MAF files (Mutation Annotation Format) from the TCGA (The Cancer Ge
updated 2.0 years ago by 43k • written 9.2 years ago by 6.1k
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0
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9.3k
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Comment: C: Obtain MAF from VCF
9.2 years ago by Cyriac Kandoth 6.1k
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2.8k
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Comment: Comment: Annotating a VCF [FORMAT not INFO field]
updated 2.2 years ago by 43k • written 9.3 years ago by 6.1k
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3.1k
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Comment: Comment: Is there any database that can link the germline/somatic variant to cancer targe
updated 2.1 years ago by 43k • written 9.3 years ago by 6.1k
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19k
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Comment: C: Vcf To Maf (Mutation Annotation Format) Conversion ?
9.3 years ago by Cyriac Kandoth 6.1k
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1
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4.3k
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Comment: Comment: Consistency of clinical data from TCGA (melanoma)
updated 2.2 years ago by 43k • written 9.4 years ago by 6.1k
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0
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15k
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Comment: Comment: Retreiving Data From Tcga Database
updated 2.2 years ago by 43k • written 9.4 years ago by 6.1k
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1
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15k
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Comment: Comment: Retreiving Data From Tcga Database
updated 2.2 years ago by 43k • written 9.4 years ago by 6.1k
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4.4k
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Comment: C: How to determine whether a gene is present or absent?
9.5 years ago by Cyriac Kandoth 6.1k
1
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0
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4.4k
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Comment: C: How to determine whether a gene is present or absent?
9.5 years ago by Cyriac Kandoth 6.1k
1
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0
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13k
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Comment: Comment: Help understanding the non-coding exons in a gene.
updated 2.2 years ago by 43k • written 9.5 years ago by 6.1k
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0
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2.9k
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Comment: C: Slow Download From TCGA
9.5 years ago by Cyriac Kandoth 6.1k
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2
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55k
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Comment: C: Working With Maf Files (Mutation Annotation Format) From The Tcga (The Cancer Ge
9.5 years ago by Cyriac Kandoth 6.1k
1
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1
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6.3k
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Comment: C: Finding significant overlap of mutations in a specific cancer tumors and its rep
9.5 years ago by Cyriac Kandoth 6.1k
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0
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2.5k
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Comment: C: Can we do unsupervised clustering of Varscan output based on variant frequencies
9.5 years ago by Cyriac Kandoth 6.1k
0
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0
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3.0k
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Comment: Comment: Error while running vcf2maf utility
updated 2.3 years ago by 43k • written 9.5 years ago by 6.1k
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0
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55k
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Comment: Comment: Working with MAF files (Mutation Annotation Format) from the TCGA (The Cancer Ge
updated 2.3 years ago by 43k • written 9.5 years ago by 6.1k
0
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0
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4.5k
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Comment: Comment: The variance gene for normal people as the control set compared with TCGA gene m
updated 2.5 years ago by 43k • written 9.5 years ago by 6.1k
0
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1
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55k
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Comment: Comment: Working with MAF files (Mutation Annotation Format) from the TCGA (The Cancer Ge
updated 2.3 years ago by 43k • written 9.5 years ago by 6.1k
0
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1
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15k
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Comment: C: Anyone Has A Working Example On How To Run Broad'S Absolute On Exome Sequencing
9.5 years ago by Cyriac Kandoth 6.1k
1
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0
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3.2k
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Comment: Comment: Problems running Genome MuSiC Play
updated 2.3 years ago by 43k • written 9.6 years ago by 6.1k
0
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0
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14k
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Comment: C: Do I need to normalize level 3 TCGA data?
9.6 years ago by Cyriac Kandoth 6.1k
2
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0
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26k
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Comment: C: The New Grch38 Human Genome Browser Has Arrived!
9.6 years ago by Cyriac Kandoth 6.1k
1
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0
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8.7k
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Comment: Comment: MAF (minor allele frequency) calculation for finding rare variants from TCGA
updated 2.3 years ago by 43k • written 9.6 years ago by 6.1k
0
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0
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55k
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Comment: C: Working with MAF files (Mutation Annotation Format) from the TCGA (The Cancer Ge
9.6 years ago by Cyriac Kandoth 6.1k
1
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2
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55k
views
Comment: Comment: Working with MAF files (Mutation Annotation Format) from the TCGA (The Cancer Ge
updated 2.3 years ago by 43k • written 9.6 years ago by 6.1k
0
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0
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38k
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Comment: C: Best Software For Detection Of Somatic Mutations From Matched Tumor:Normal Ngs D
9.6 years ago by Cyriac Kandoth 6.1k
0
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0
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2.9k
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Comment: C: liftover a fasta file
9.6 years ago by Cyriac Kandoth 6.1k
0
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0
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1.9k
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Comment: Comment: Is there an information source that lists the differences between clonal and par
updated 2.4 years ago by 43k • written 9.7 years ago by 6.1k
0
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1
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6.9k
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Comment: C: Doesn't Base Quality Score Recalibration degrade sensitivity in heavily mutated
9.7 years ago by Cyriac Kandoth 6.1k
1
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0
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3.9k
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Comment: C: TCGA Clinical Data "Inconsistency"?
9.7 years ago by Cyriac Kandoth 6.1k
0
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1
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11k
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Comment: C: TCGA CNV Files
9.7 years ago by Cyriac Kandoth 6.1k
1
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0
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6.9k
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Comment: Comment: Doesn't Base Quality Score Recalibration degrade sensitivity in heavily mutated
updated 2.4 years ago by 43k • written 9.7 years ago by 6.1k
0
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1
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14k
views
Comment: C: Do I need to normalize level 3 TCGA data?
9.7 years ago by Cyriac Kandoth 6.1k
147 results • Page 2 of 3
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