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2
votes
2
replies
6.6k
views
Answer: A: Convert GVF to VCF
8.9 years ago by Ying W ★ 4.2k
0
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0
replies
2.8k
views
Answer: A: representation of chipseq and RNA-seq data
9.0 years ago by Ying W ★ 4.2k
10
votes
2
replies
9.7k
views
Answer: Answer: What statistical test does DESeq use?
updated 21 months ago by 41k • written 9.0 years ago by ★ 4.2k
5
votes
1
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8.6k
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Answer: A: Difference between various GRCH 37 releases?
9.0 years ago by Ying W ★ 4.2k
1
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1
reply
4.3k
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Answer: Answer: tag density v.s. binding affinity v.s. signal value
updated 21 months ago by 41k • written 9.0 years ago by ★ 4.2k
0
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0
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3.4k
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Answer: A: TCGA data looks different on ICGC
9.0 years ago by Ying W ★ 4.2k
5
votes
0
replies
10k
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Answer: Answer: Comparing two ChIP-seq libraries
updated 21 months ago by 41k • written 9.0 years ago by ★ 4.2k
0
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0
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2.2k
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Answer: A: calling 1000G SNPs/indels from ngs data (chipseq or other source)
9.0 years ago by Ying W ★ 4.2k
1
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0
replies
2.8k
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Answer: A: Which journal do you frequently read/recommend for reviews/updates in computatio
9.0 years ago by Ying W ★ 4.2k
0
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1
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7.4k
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Answer: A: What is trace in R's heatmap.2 function?
9.0 years ago by Ying W ★ 4.2k
1
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0
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2.6k
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Answer: A: Chip-seq common control for two treatments
9.0 years ago by Ying W ★ 4.2k
4
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1
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8.9k
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Answer: A: Seqlogo and Homer
9.2 years ago by Ying W ★ 4.2k
3
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0
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5.7k
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Answer: A: How can I programmatically download the GEO DataSets of a given accession?
9.2 years ago by Ying W ★ 4.2k
2
votes
0
replies
4.5k
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Answer: A: chipseq data normalization
9.5 years ago by Ying W ★ 4.2k
1
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1
reply
5.0k
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Answer: A: Which kind of microRNAs expression are measured in TCGA?
9.6 years ago by Ying W ★ 4.2k
1
vote
1
reply
3.4k
views
Answer: A: Illumina Microarray Annotation
9.6 years ago by Ying W ★ 4.2k
2
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2
replies
7.6k
views
Answer: A: WGCNA with time series data
9.6 years ago by Ying W ★ 4.2k
1
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1
reply
3.7k
views
Answer: A: Constructing Compute Resources In Support Of Ngs In A Hospital Setting
9.8 years ago by Ying W ★ 4.2k
0
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0
replies
2.5k
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Answer: A: Mat Algorithm Score For Chip Chip Data
9.8 years ago by Ying W ★ 4.2k
1
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0
replies
4.2k
views
Answer: A: Meaning Of Negative Values In Wig File?
9.8 years ago by Ying W ★ 4.2k
1
vote
1
reply
3.5k
views
Answer: A: Which Is An Acceptable Pipeline From Sequencing To Deep Annotation?
updated 9.9 years ago by 3.5k • written 9.9 years ago by ★ 4.2k
1
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0
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4.9k
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Answer: A: What Next After Snp Identification
9.9 years ago by Ying W ★ 4.2k
2
votes
2
replies
4.4k
views
Answer: A: 1000G Query / Using Tabix With A Proxy
10.0 years ago by Ying W ★ 4.2k
2
votes
1
reply
8.8k
views
Answer: A: Illumina-Fastq To Sanger-Fastq Conversion
10.0 years ago by Ying W ★ 4.2k
2
votes
1
reply
6.0k
views
Answer: A: Per Sample Mpileup Output From Merged Bam File
10.0 years ago by Ying W ★ 4.2k
1
vote
0
replies
4.1k
views
Answer: A: Where Can I Find An Explanation For The Adm-2 Algorithm Used By Agilent For Arra
10.0 years ago by Ying W ★ 4.2k
3
votes
1
reply
7.2k
views
Answer: A: Best Practices For Using Fimo For Motif Scanning
10.0 years ago by Ying W ★ 4.2k
1
vote
1
reply
2.8k
views
Answer: A: Assemble Reads According To Blast Result
10.1 years ago by Ying W ★ 4.2k
0
votes
1
reply
4.3k
views
Answer: A: Using Genomicranges
10.1 years ago by Ying W ★ 4.2k
1
vote
0
replies
7.7k
views
Answer: A: What Are The Best Normalization Methods For Ngs Data
10.1 years ago by Ying W ★ 4.2k
0
votes
1
reply
3.8k
views
Answer: A: When Normalizing Chip-Seq Replicates, Is It Better To Normalize All Reads, Or On
10.1 years ago by Ying W ★ 4.2k
2
votes
0
replies
4.6k
views
Answer: A: Differential Regions In Histone Modification
10.1 years ago by Ying W ★ 4.2k
2
votes
0
replies
5.9k
views
Answer: A: Tool Or Technique To Find Co-Occuring Motifs Within Genomic Intervals That Corr
10.2 years ago by Ying W ★ 4.2k
3
votes
1
reply
21k
views
Answer: A: Create Heat Map Using Edger Output Data
10.2 years ago by Ying W ★ 4.2k
1
vote
0
replies
13k
views
Answer: A: Heatmap Of Read Coverage Around Tsss
10.2 years ago by Ying W ★ 4.2k
1
vote
0
replies
1.8k
views
Answer: A: Multiple Files For Reading,Heatmap And Saving
10.4 years ago by Ying W ★ 4.2k
1
vote
2
replies
7.2k
views
Answer: A: Which Pipeline To Analyze Dnase-Seq For Significant Regulatory-Region Finding?
10.6 years ago by Ying W ★ 4.2k
1
vote
1
reply
4.0k
views
Answer: A: Extracting Sequences After "Motif" & Between Motifs In Multifasta File
10.7 years ago by Ying W ★ 4.2k
0
votes
0
replies
2.3k
views
Answer: A: Apply Idr On List Of Read Counts
10.7 years ago by Ying W ★ 4.2k
0
votes
0
replies
5.3k
views
Answer: A: Visualizing Up/Down Regulation Of Genes Based On Fold Change
10.7 years ago by Ying W ★ 4.2k
1
vote
1
reply
3.6k
views
Answer: A: Problems Filtering Probes From Series Matrix File With Bioconductor
updated 10.8 years ago by 99k • written 10.8 years ago by ★ 4.2k
3
votes
0
replies
9.6k
views
Answer: A: Difference Between Picards Mergebamalignment And Mergesamfiles
10.9 years ago by Ying W ★ 4.2k
2
votes
0
replies
22k
views
Answer: A: Sam File Format - Lesser Known Tips And Tricks
10.9 years ago by Ying W ★ 4.2k
0
votes
0
replies
3.0k
views
Answer: A: Gmap Output Statistics
10.9 years ago by Ying W ★ 4.2k
4
votes
0
replies
11k
views
Answer: A: Best Practice Approach In R To Processing Illumina Microarrays For Rna Profilin
10.9 years ago by Ying W ★ 4.2k
0
votes
0
replies
4.7k
views
Answer: A: Differential Open Chromatin Locations From Dnase-Seq Data
11.1 years ago by Ying W ★ 4.2k
0
votes
1
reply
6.3k
views
Answer: A: Cap3 Assembly
11.1 years ago by Ying W ★ 4.2k
2
votes
3
replies
6.2k
views
Answer: A: Why Does Chip-Seq Data Have Lots Of Reverse-Complement Pairs Of Reads?
updated 11.2 years ago by 99k • written 11.7 years ago by ★ 4.2k
1
vote
0
replies
11k
views
Answer: A: Correlation Coefficient Between Chip-Seq Replicates
11.4 years ago by Ying W ★ 4.2k
1
vote
0
replies
2.3k
views
Answer: A: Tfbs Predictions For The Yeast And Pombe Genomes
11.5 years ago by Ying W ★ 4.2k
126 results • Page 2 of 3
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