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3.1k
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Comment:
C: How do Read Alignment tools detect PCR duplicates?
5.2 years ago by
dariober
14k
0
votes
0
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3.0k
views
Comment:
C: How do BWA and Bowtie2 decide where to place paired reads and what flags affect
5.2 years ago by
dariober
14k
0
votes
1
reply
7.1k
views
Comment:
C: MACS2 option for ATAC seq?
5.2 years ago by
dariober
14k
2
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0
replies
1.6k
views
Comment:
C: How to generate a short sequence that does not align to the RefSeq?
5.3 years ago by
dariober
14k
0
votes
0
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1.3k
views
Comment:
C: Changing file name with sed command
5.3 years ago by
dariober
14k
1
vote
1
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2.5k
views
Comment:
C: How does bcftools isec do the intersection?
5.3 years ago by
dariober
14k
3
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0
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43k
views
Comment:
C: How can I convert -log10 (p-value) to p-value?
5.3 years ago by
dariober
14k
0
votes
0
replies
2.2k
views
Comment:
C: Convert indel list with [-/A] notation to VCF with adjacent base
5.4 years ago by
dariober
14k
0
votes
0
replies
3.8k
views
Comment:
C: How to get a matrix gene weights in NMF
5.4 years ago by
dariober
14k
0
votes
1
reply
4.7k
views
Comment:
C: Filter VCF with bash commands
5.5 years ago by
dariober
14k
0
votes
1
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4.7k
views
Comment:
C: Filter VCF with bash commands
5.5 years ago by
dariober
14k
1
vote
1
reply
12k
views
Comment:
C: workflow management system : WDL, CWL, Ruffus, SnakeMake, etc
5.6 years ago by
dariober
14k
0
votes
1
reply
1.3k
views
Comment:
C: How can i increase variants accuracy?
5.6 years ago by
dariober
14k
1
vote
1
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2.9k
views
Comment:
C: So frustrated compiling necessary packages in a linux system
5.6 years ago by
dariober
14k
0
votes
0
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6.1k
views
Comment:
C: How to write the output in snakefile (snakemake) for bowtie2-build
5.6 years ago by
dariober
14k
0
votes
0
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1.5k
views
Comment:
C: Is BED file generated by bametobed sorted ?
5.6 years ago by
dariober
14k
0
votes
1
reply
3.3k
views
Comment:
C: Alternative to VEP.
5.6 years ago by
dariober
14k
0
votes
1
reply
1.5k
views
Comment:
C: Organizing tools/ software
5.7 years ago by
dariober
14k
0
votes
1
reply
7.5k
views
Comment:
C: i cant sort bed file. Error in bedtools merge.
updated 5.7 years ago by
Ram
43k • written 8.2 years ago by
dariober
14k
0
votes
1
reply
2.6k
views
Comment:
C: Notable open source bioinformatics projects written in Java?
updated 5.7 years ago by
Ram
43k • written 8.2 years ago by
dariober
14k
0
votes
0
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1.7k
views
Comment:
C: Library Htsjdk to query a vcf file
updated 5.7 years ago by
Ram
43k • written 8.2 years ago by
dariober
14k
0
votes
0
replies
6.5k
views
Comment:
C: Why do R1 and R2 compressed files have different size
5.7 years ago by
dariober
14k
0
votes
0
replies
3.0k
views
Comment:
C: Bioinformatics developer / Software engineer
5.7 years ago by
dariober
14k
1
vote
1
reply
1.7k
views
Comment:
C: SortSam is failing due to Error Parsing SAM file: ("Tag of type i should have si
5.7 years ago by
dariober
14k
1
vote
1
reply
3.6k
views
Comment:
C: Why my pvalue histogram doesn't have uniform distribution
5.8 years ago by
dariober
14k
0
votes
0
replies
20k
views
Comment:
C: Download of dbSNP VCF file
5.8 years ago by
dariober
14k
0
votes
0
replies
4.5k
views
Comment:
C: Assigning subject to query based on coverage from blast output file
5.9 years ago by
dariober
14k
0
votes
0
replies
4.9k
views
Comment:
C: Extract PE Reads (with their mates) supporting variants in vcf file
5.9 years ago by
dariober
14k
1
vote
1
reply
4.4k
views
Comment:
C: Estimating cross contamination in a set of BAMS
5.9 years ago by
dariober
14k
1
vote
1
reply
3.0k
views
Comment:
C: Does BWA mem ever edit data
5.9 years ago by
dariober
14k
0
votes
0
replies
2.8k
views
Comment:
C: Installing IGV on Bio-linux 8 - Installing All Dependancies At Once
6.0 years ago by
dariober
14k
0
votes
1
reply
1.4k
views
Comment:
C: statistics data, observed vs expected values
6.0 years ago by
dariober
14k
0
votes
2
replies
2.2k
views
Comment:
C: Where can I download homo sapiens gene locations file including ensembl gene id,
6.1 years ago by
dariober
14k
0
votes
0
replies
2.2k
views
Comment:
C: Where can I download homo sapiens gene locations file including ensembl gene id,
6.1 years ago by
dariober
14k
1
vote
2
replies
1.7k
views
Comment:
C: Variant with AD 14,3 is heterozygote?
6.1 years ago by
dariober
14k
0
votes
1
reply
1.9k
views
Comment:
C: What are the methods to downsample the Depth of coverage (ex: 50X -> 25X)?
6.1 years ago by
dariober
14k
0
votes
2
replies
3.8k
views
Comment:
C: How to get a matrix gene weights in NMF
6.2 years ago by
dariober
14k
3
votes
0
replies
1.7k
views
Comment:
C: How to check if a read in a SAM file contains substitutions
6.2 years ago by
dariober
14k
0
votes
1
reply
4.4k
views
Comment:
C: SAM MD tag for consecutive insertions/deletions
6.2 years ago by
dariober
14k
0
votes
1
reply
5.4k
views
Comment:
C: intersection, Bed file and VCF.
6.2 years ago by
dariober
14k
3
votes
1
reply
12k
views
Comment:
C: TMB Tumor Mutation Burden
6.2 years ago by
dariober
14k
1
vote
0
replies
1.6k
views
Comment:
C: Sorting file by column, with missing values
6.3 years ago by
dariober
14k
0
votes
1
reply
3.0k
views
Comment:
C: WGS data for pipeline development
6.3 years ago by
dariober
14k
1
vote
1
reply
2.6k
views
Comment:
C: Importing Uniprot into BioSQL using BioPython takes years (nearly literally!)
6.3 years ago by
dariober
14k
2
votes
0
replies
2.6k
views
Comment:
C: Importing Uniprot into BioSQL using BioPython takes years (nearly literally!)
6.3 years ago by
dariober
14k
0
votes
0
replies
1.4k
views
Comment:
C: Packages/modules for CNV, Indels, SNPs analysis
6.3 years ago by
dariober
14k
1
vote
1
reply
1.3k
views
Comment:
C: Algorithms to know when starting out analyzing transcriptome data
6.3 years ago by
dariober
14k
1
vote
1
reply
24k
views
Comment:
C: Difference between tSNE and PCA analysis
6.3 years ago by
dariober
14k
0
votes
0
replies
5.3k
views
Comment:
C: visualize CNV data based on WGS
6.3 years ago by
dariober
14k
0
votes
1
reply
5.3k
views
Comment:
C: visualize CNV data based on WGS
6.3 years ago by
dariober
14k
525 results • Page
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