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Comment:
Comment: cnv_facets: somatic Copy Number Variant calling using the facets package
1 day ago by
dariober
14k
6
votes
2
replies
6.0k
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Tool:
cnv_facets: somatic Copy Number Variant calling using the facets package
CNV
somatic
facets
cancer
1 day ago by
dariober
14k
0
votes
1
reply
1.0k
views
Comment:
Comment: DEseq2 on expected counts
15 days ago by
dariober
14k
1
vote
1
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346
views
Answer:
Answer: Need help with design/workflow please?
17 days ago by
dariober
14k
0
votes
0
replies
904
views
Comment:
Comment: why R scripts are preferred to biopython for RNA-Seq analyses?
23 days ago by
dariober
14k
1
vote
0
replies
904
views
Answer:
Answer: why R scripts are preferred to biopython for RNA-Seq analyses?
23 days ago by
dariober
14k
2
votes
1
reply
456
views
Answer:
Answer: DESeq2 results vs. shrinkage results
5 weeks ago by
dariober
14k
0
votes
1
reply
763
views
Comment:
Comment: NCBI CLI Download all proteins from Taxid
8 weeks ago by
dariober
14k
0
votes
1
reply
763
views
Comment:
Comment: NCBI CLI Download all proteins from Taxid
8 weeks ago by
dariober
14k
1
vote
1
reply
672
views
Comment:
Comment: How to use Anaconda/Miniconda more effectively ?
9 weeks ago by
dariober
14k
1
vote
1
reply
672
views
Answer:
Answer: How to use Anaconda/Miniconda more effectively ?
9 weeks ago by
dariober
14k
0
votes
1
reply
552
views
Comment:
Comment: Adjusting for covariates such as duration of diabetes, age, sex and BMI
9 weeks ago by
dariober
14k
1
vote
1
reply
552
views
Answer:
Answer: Adjusting for covariates such as duration of diabetes, age, sex and BMI
9 weeks ago by
dariober
14k
0
votes
1
reply
281
views
Comment:
Comment: Illumina runfolder structure
10 weeks ago by
dariober
14k
0
votes
0
replies
483
views
Comment:
Comment: how linearize nucleotide lines in axt file
10 weeks ago by
dariober
14k
4
votes
0
replies
435
views
Comment:
Comment: conda-like env for R
12 weeks ago by
dariober
14k
0
votes
1
reply
860
views
Comment:
Comment: How do i calculate the mean of triplicates in a data.frame based on pattern?
3 months ago by
dariober
14k
0
votes
0
replies
716
views
Comment:
Comment: I cannot download VG in any way
3 months ago by
dariober
14k
4
votes
2
replies
860
views
Answer:
Answer: How do i calculate the mean of triplicates in a data.frame based on pattern?
3 months ago by
dariober
14k
1
vote
0
replies
475
views
Answer:
Answer: Differential Expression with limma: Contrast and Design Matrix, combinatorial ap
3 months ago by
dariober
14k
2
votes
0
replies
411
views
Comment:
Comment: removeBatchEffect explained using base R linear models
3 months ago by
dariober
14k
1
vote
1
reply
1.1k
views
Comment:
Comment: BRAKER3 genome annotation
4 months ago by
dariober
14k
2
votes
3
replies
1.1k
views
Answer:
Answer: BRAKER3 genome annotation
4 months ago by
dariober
14k
3
votes
0
replies
1.6k
views
Answer:
Answer: How I know if it is a batch effect or are real differences between my controls a
4 months ago by
dariober
14k
1
vote
1
reply
402
views
Comment:
Comment: permutation test in edgeR
4 months ago by
dariober
14k
2
votes
1
reply
691
views
Answer:
Answer: Error Codes in Snakemake
4 months ago by
dariober
14k
1
vote
0
replies
413
views
Comment:
Comment: CCA with random effects model
5 months ago by
dariober
14k
0
votes
0
replies
506
views
Comment:
Comment: Volcano Plot Output Inquiry: Graphs Facing Down
5 months ago by
dariober
14k
3
votes
0
replies
518
views
Comment:
Comment: Can questions and answers on biostars be asked only in English? Can't I use Russ
5 months ago by
dariober
14k
1
vote
0
replies
1.1k
views
Answer:
Answer: t-test in two groups, multiple rows
5 months ago by
dariober
14k
2
votes
0
replies
730
views
Answer:
Answer: Snakemake's SyntaxError positional argument follows keyword argument
5 months ago by
dariober
14k
1
vote
1
reply
571
views
Answer:
Answer: I do not understand how to get total peaks from MACS2 shown to me. What mistake(
5 months ago by
dariober
14k
0
votes
0
replies
262
views
Comment:
Comment: Testing the effect of the salinity water on abundance estimates
5 months ago by
dariober
14k
2
votes
1
reply
717
views
Answer:
Answer: Snakemake: how to define output from a dictionary according to wildcard
6 months ago by
dariober
14k
0
votes
0
replies
569
views
Comment:
Comment: Why statistic test should I use?
6 months ago by
dariober
14k
3
votes
3
replies
1.5k
views
Comment:
Comment: Shrink logFC values after edgeR
6 months ago by
dariober
14k
0
votes
0
replies
2.8k
views
Comment:
Comment: Determining computer time required
7 months ago by
dariober
14k
0
votes
1
reply
644
views
Answer:
Answer: What featuretype I should select for featureCounts tool.
7 months ago by
dariober
14k
0
votes
2
replies
1.7k
views
Comment:
Comment: Some lines are not well organized in BED file, how to correct them ? Thanks a lo
7 months ago by
dariober
14k
0
votes
0
replies
1.3k
views
Comment:
Comment: Snakemake rule error
8 months ago by
dariober
14k
2
votes
0
replies
1.3k
views
Answer:
Answer: Snakemake rule error
8 months ago by
dariober
14k
0
votes
0
replies
853
views
Comment:
Comment: Is there a good software to generate test genomics data?
9 months ago by
dariober
14k
1
vote
1
reply
787
views
Comment:
Comment: Strand bias in supplementary alignments from Nanopore
9 months ago by
dariober
14k
5
votes
3
replies
787
views
Strand bias in supplementary alignments from Nanopore
minimap2
nanopore
strand
updated 9 months ago by
cmdcolin
★ 3.9k • written 9 months ago by
dariober
14k
2
votes
1
reply
1.0k
views
Answer:
Answer: Snakemake alignment script
11 months ago by
dariober
14k
0
votes
1
reply
2.1k
views
Comment:
Comment: geom_signif() uses t-test to compare between more than 3 groups... Isn't this wr
11 months ago by
dariober
14k
0
votes
0
replies
1.3k
views
Comment:
Comment: Elusive syntax error in Snakefile
11 months ago by
dariober
14k
0
votes
0
replies
2.2k
views
Comment:
Comment: How to limit fasta header to 40 characters?
12 months ago by
dariober
14k
1
vote
1
reply
814
views
Answer:
Answer: Error in snakemake with working shell script
12 months ago by
dariober
14k
0
votes
1
reply
1.7k
views
Answer:
Answer: how to run FacetsSuite wrapper scripts on command line
15 months ago by
dariober
14k
1,118 results • Page
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