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Comment: Comment: How to perform synteny alignments and plots only with a gene?
1 day ago by cmdcolin ★ 2.9k
2
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1
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603
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Answer: Answer: How to perform synteny alignments and plots only with a gene?
3 days ago by cmdcolin ★ 2.9k
0
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0
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344
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Comment: Comment: How to remove homozygous reference genotypes from multi-sample vcf file based on
5 days ago by cmdcolin ★ 2.9k
0
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1
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344
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Comment: Comment: How to remove homozygous reference genotypes from multi-sample vcf file based on
6 days ago by cmdcolin ★ 2.9k
0
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1
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344
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Answer: Answer: How to remove homozygous reference genotypes from multi-sample vcf file based on
6 days ago by cmdcolin ★ 2.9k
2
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0
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225
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Answer: Answer: How to create a graph that shows pairwise Fst values at single SNP loci across t
7 days ago by cmdcolin ★ 2.9k
4
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1
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498
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Answer: Answer: Realigning BAM files to new reference
10 days ago by cmdcolin ★ 2.9k
0
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1
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294
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Comment: Comment: what does total count mean at a location in IGV
13 days ago by cmdcolin ★ 2.9k
2
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1
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724
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Answer: Answer: Rust bioinformatics projects ideas
15 days ago by cmdcolin ★ 2.9k
0
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1
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302
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Answer: Answer: Alternatives to Lollipop for virus variant data
4 weeks ago by cmdcolin ★ 2.9k
0
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0
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70k
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Comment: Comment: How to Install SamTools, HTSLib, and BCFTools on Ubuntu 18.04
4 weeks ago by cmdcolin ★ 2.9k
0
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0
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236
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Comment: Comment: Visualize variants and percentage of variants from one sample of Amplicon Seq da
6 weeks ago by cmdcolin ★ 2.9k
5
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0
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238
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Tool: BAM index visualizer - a tool for helping to understand the BAI file format
bam
7 weeks ago by cmdcolin ★ 2.9k
4
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1
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371
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Answer: Answer: Gviz python alternative
7 weeks ago by cmdcolin ★ 2.9k
1
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0
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601
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Comment: Comment: Mapping a small number of contigs to a reference subsequence
7 weeks ago by cmdcolin ★ 2.9k
0
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2
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816
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Comment: Comment: bedGraph to bigwig
7 weeks ago by cmdcolin ★ 2.9k
3
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1
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601
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Answer: Answer: Mapping a small number of contigs to a reference subsequence
7 weeks ago by cmdcolin ★ 2.9k
0
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1
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334
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Answer: Answer: Program to View Average Coverage with Variance of BAM/Bigwig Files?
9 weeks ago by cmdcolin ★ 2.9k
0
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0
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431
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Comment: Comment: JBrowse on GitHub (A question about file size)
9 weeks ago by cmdcolin ★ 2.9k
2
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1
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431
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Answer: Answer: JBrowse on GitHub (A question about file size)
9 weeks ago by cmdcolin ★ 2.9k
0
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0
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829
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Answer: Answer: How to create a dotplot like this for GSEA analysis from DNA methylation data (C
9 weeks ago by cmdcolin ★ 2.9k
0
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0
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493
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Comment: Comment: Extract alignment in fasta format from BAM/SAM file
10 weeks ago by cmdcolin ★ 2.9k
0
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0
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616
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Comment: Comment: Get length of the alignment from bam file with shell
10 weeks ago by cmdcolin ★ 2.9k
3
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1
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441
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Answer: Answer: How to calculate coverage of Nanopore long read data?
11 weeks ago by cmdcolin ★ 2.9k
0
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0
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720
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Comment: Comment: batch sequence retrieval using exon coordinates
11 weeks ago by cmdcolin ★ 2.9k
0
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0
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500
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Comment: Comment: remove CIGAR strings starting with insertion
updated 11 weeks ago by 38k • written 11 weeks ago by ★ 2.9k
3
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1
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500
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Answer: Answer: remove CIGAR strings starting with insertion
11 weeks ago by cmdcolin ★ 2.9k
0
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1
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451
views
Comment: Comment: Gene location of both inherited gene
12 weeks ago by cmdcolin ★ 2.9k
3
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1
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451
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Answer: Answer: Gene location of both inherited gene
12 weeks ago by cmdcolin ★ 2.9k
0
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0
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600
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Comment: Comment: find the mate of a read using pysam
3 months ago by cmdcolin ★ 2.9k
0
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1
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600
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Comment: Comment: find the mate of a read using pysam
3 months ago by cmdcolin ★ 2.9k
1
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1
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1.1k
views
Comment: Comment: pyCirclize - Circular visualization in Python
3 months ago by cmdcolin ★ 2.9k
0
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0
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38k
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Comment: Comment: Difference Between "Mate Pair" And "Pair-End"
3 months ago by cmdcolin ★ 2.9k
0
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1
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456
views
Comment: Comment: How is p-value calculated in MACS2
3 months ago by cmdcolin ★ 2.9k
1
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1
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456
views
Answer: Answer: How is p-value calculated in MACS2
3 months ago by cmdcolin ★ 2.9k
1
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1
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12k
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Comment: Comment: What are Supplementary Reads?
3 months ago by cmdcolin ★ 2.9k
2
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1
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12k
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Answer: Answer: What's Supplementary Reads?
3 months ago by cmdcolin ★ 2.9k
1
vote
1
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70k
views
Answer: Answer: How to Install SamTools, HTSLib, and BCFTools on Ubuntu 18.04
3 months ago by cmdcolin ★ 2.9k
1
vote
0
replies
500
views
Comment: Comment: Visualization tools for phased haplotypes
3 months ago by cmdcolin ★ 2.9k
0
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1
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500
views
Comment: Comment: Visualization tools for phased haplotypes
3 months ago by cmdcolin ★ 2.9k
0
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0
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228
views
Answer: Answer: CNV evaluate confidence
4 months ago by cmdcolin ★ 2.9k
3
votes
0
replies
322
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Comment: Comment: The Biostar Herald for Monday, November 14, 2022
4 months ago by cmdcolin ★ 2.9k
0
votes
0
replies
482
views
Comment: Comment: How to open/work with wig or tdf files
4 months ago by cmdcolin ★ 2.9k
1
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0
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562
views
Comment: Comment: Databases with Genes <-> Diseases relations
5 months ago by cmdcolin ★ 2.9k
1
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1
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562
views
Answer: Answer: Databases with Genes <-> Diseases relations
5 months ago by cmdcolin ★ 2.9k
1
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0
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607
views
Answer: Answer: Tools to plot gene arrow diagram
5 months ago by cmdcolin ★ 2.9k
0
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1
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302
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Answer: Answer: Tool to detect small inversion in plastome
5 months ago by cmdcolin ★ 2.9k
0
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0
replies
474
views
Answer: Answer: Tool for extracting part of aligned sequence by CIGAR string
5 months ago by cmdcolin ★ 2.9k
0
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1
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647
views
Comment: Comment: proper way to alter bgzf-compressed fastq files using htslib, multithreaded
5 months ago by cmdcolin ★ 2.9k
0
votes
1
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647
views
Comment: Comment: proper way to alter bgzf-compressed fastq files using htslib, multithreaded
6 months ago by cmdcolin ★ 2.9k
407 results • Page 1 of 9
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