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Answer: Answer: synteny viewer
1 hour ago by cmdcolin ★ 3.0k
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363
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Answer: Answer: How to Split 3000 WGS CRAM files into 1Mbp length chunks
13 days ago by cmdcolin ★ 3.0k
2
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1
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254
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Answer: Answer: interpreting inversions on IGV
16 days ago by cmdcolin ★ 3.0k
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442
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Answer: Answer: Fast BAM header editing
20 days ago by cmdcolin ★ 3.0k
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2
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330
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Answer: Answer: Haplotype specific alleles
24 days ago by cmdcolin ★ 3.0k
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1
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464
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Answer: Answer: Detecting heterozygous deletions in NGS sequence data
8 weeks ago by cmdcolin ★ 3.0k
2
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1
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901
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Answer: Answer: How to perform synteny alignments and plots only with a gene?
11 weeks ago by cmdcolin ★ 3.0k
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1
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508
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Answer: Answer: How to remove homozygous reference genotypes from multi-sample vcf file based on
12 weeks ago by cmdcolin ★ 3.0k
2
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408
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Answer: Answer: How to create a graph that shows pairwise Fst values at single SNP loci across t
12 weeks ago by cmdcolin ★ 3.0k
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1
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660
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Answer: Answer: Realigning BAM files to new reference
12 weeks ago by cmdcolin ★ 3.0k
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1.1k
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Answer: Answer: Rust bioinformatics projects ideas
3 months ago by cmdcolin ★ 3.0k
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422
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Answer: Answer: Alternatives to Lollipop for virus variant data
3 months ago by cmdcolin ★ 3.0k
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509
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Answer: Answer: Gviz python alternative
4 months ago by cmdcolin ★ 3.0k
3
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921
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Answer: Answer: Mapping a small number of contigs to a reference subsequence
4 months ago by cmdcolin ★ 3.0k
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1
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414
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Answer: Answer: Program to View Average Coverage with Variance of BAM/Bigwig Files?
4 months ago by cmdcolin ★ 3.0k
2
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1
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489
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Answer: Answer: JBrowse on GitHub (A question about file size)
4 months ago by cmdcolin ★ 3.0k
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1.4k
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Answer: Answer: How to create a dotplot like this for GSEA analysis from DNA methylation data (C
4 months ago by cmdcolin ★ 3.0k
3
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638
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Answer: Answer: How to calculate coverage of Nanopore long read data?
5 months ago by cmdcolin ★ 3.0k
3
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1
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624
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Answer: Answer: remove CIGAR strings starting with insertion
5 months ago by cmdcolin ★ 3.0k
3
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1
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512
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Answer: Answer: Gene location of both inherited gene
5 months ago by cmdcolin ★ 3.0k
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1
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632
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Answer: Answer: How is p-value calculated in MACS2
5 months ago by cmdcolin ★ 3.0k
2
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1
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13k
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Answer: Answer: What's Supplementary Reads?
6 months ago by cmdcolin ★ 3.0k
1
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1
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75k
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Answer: Answer: How to Install SamTools, HTSLib, and BCFTools on Ubuntu 18.04
6 months ago by cmdcolin ★ 3.0k
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0
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279
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Answer: Answer: CNV evaluate confidence
6 months ago by cmdcolin ★ 3.0k
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1
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618
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Answer: Answer: Databases with Genes <-> Diseases relations
8 months ago by cmdcolin ★ 3.0k
1
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0
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875
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Answer: Answer: Tools to plot gene arrow diagram
8 months ago by cmdcolin ★ 3.0k
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1
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346
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Answer: Answer: Tool to detect small inversion in plastome
8 months ago by cmdcolin ★ 3.0k
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0
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761
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Answer: Answer: Tool for extracting part of aligned sequence by CIGAR string
8 months ago by cmdcolin ★ 3.0k
1
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2
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670
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Answer: Answer: Which VCF file to select for generating Multiple sequence alignment of a gene?
9 months ago by cmdcolin ★ 3.0k
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1
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1.3k
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Answer: Answer: Tools to obtain sequence from bam file
9 months ago by cmdcolin ★ 3.0k
4
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1
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524
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Answer: Answer: Chromosome pair numbers in variant annotation.
9 months ago by cmdcolin ★ 3.0k
1
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0
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702
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Answer: Answer: Copy Number Variation (CNV) visualizer
9 months ago by cmdcolin ★ 3.0k
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1
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1.0k
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Answer: Answer: converting bedgraph to bigwig by not using ucsc tools
9 months ago by cmdcolin ★ 3.0k
2
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2
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2.0k
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Answer: Answer: How to determine assembly of a VCF?
9 months ago by cmdcolin ★ 3.0k
1
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0
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381
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Answer: Answer: Upload database of a tool
10 months ago by cmdcolin ★ 3.0k
0
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0
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386
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Answer: Answer: Add species name to a multiple alignment format (MAF) file
10 months ago by cmdcolin ★ 3.0k
0
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1
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1.8k
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Answer: Answer: BCFtools consensus
10 months ago by cmdcolin ★ 3.0k
2
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1
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1.6k
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Answer: Answer: Best resource for getting a person with a Math/Comp Sci background the right amo
10 months ago by cmdcolin ★ 3.0k
1
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0
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407
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Answer: Answer: Graphing gene fusions
10 months ago by cmdcolin ★ 3.0k
0
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0
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564
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Answer: Answer: The nightmare of coordinate systems
11 months ago by cmdcolin ★ 3.0k
2
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0
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289
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Answer: Answer: Duplicate chromosome location columns in a bed file makes problem in importing t
11 months ago by cmdcolin ★ 3.0k
0
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1
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9.9k
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Answer: Answer: Tabix With Gff3
11 months ago by cmdcolin ★ 3.0k
0
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1
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880
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Answer: Answer: How can I find a DNA sequence that codes for a protein from a large FASTQ file?
12 months ago by cmdcolin ★ 3.0k
1
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0
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1.3k
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Answer: Answer: Software to draw protein domains of proteins
12 months ago by cmdcolin ★ 3.0k
0
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1
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967
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Answer: Answer: sliding windows over genome
12 months ago by cmdcolin ★ 3.0k
3
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1
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518
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Answer: Answer: How can i insert a "remove duplicates" command in a samtools script?
13 months ago by cmdcolin ★ 3.0k
2
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0
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664
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Answer: Answer: Using Tabix to download region of interest from eQTL catalogue
14 months ago by cmdcolin ★ 3.0k
1
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0
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1.0k
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Answer: Answer: Change chromosome notation in bam file
15 months ago by cmdcolin ★ 3.0k
3
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1
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2.6k
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Answer: Answer: Structural Variants (SV) Manta output interpretation: MantaBND and translocation
15 months ago by cmdcolin ★ 3.0k
0
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0
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475
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Answer: Answer: Reads mapping
15 months ago by cmdcolin ★ 3.0k
124 results • Page 1 of 3
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