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Comment: Comment: VEP allele frequency from gnomAD genomes
3.5 years ago by bjwiley23 ▴ 40
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5.6k
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Comment: Comment: Symbolic alternate allele in the VCF ALT field
3.9 years ago by bjwiley23 ▴ 40
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1
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4.5k
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Comment: Comment: Is there a schema for CWL inputs/job files?
4.0 years ago by bjwiley23 ▴ 40
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10k
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Comment: Comment: fastx toolkit problem: fastq to fasta
4.2 years ago by bjwiley23 ▴ 40
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8.0k
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Comment: C: plink --assoc command gives "NA" for all the analysis (F_A,F_U,A2,CHISQ,P,OR val
4.3 years ago by bjwiley23 ▴ 40
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11k
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Comment: C: GWAS in Plink - phenotype file format
4.3 years ago by bjwiley23 ▴ 40
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5.6k
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Comment: C: PSSM (Position Specific Scoring Matrix) from NCBI convert to matrix format
4.3 years ago by bjwiley23 ▴ 40
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649
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Filter multisample VCF for variants with less than N samples
VCF
4.3 years ago by bjwiley23 ▴ 40
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30k
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Comment: C: What is the right illumina universal adapter sequence for trimming paired-end re
4.4 years ago by bjwiley23 ▴ 40
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16k
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Comment: C: How accurate is the IBD calculation by plink?
4.4 years ago by bjwiley23 ▴ 40
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1
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907
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APT rma-sketch gene has same values as exon - Affymetrix Human Exon 1.0 ST Array
APT exon-array
updated 4.5 years ago by 89k • written 4.5 years ago by ▴ 40
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3.1k
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Comment: C: issue in the vcf format using Mutect2
4.5 years ago by bjwiley23 ▴ 40
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16k
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Comment: C: Adding asterisks to a ggplot2 bar plot to show significance
4.5 years ago by bjwiley23 ▴ 40
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1
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5.2k
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Comment: C: GATK DepthOfCoverage: 'total coverage' and 'mean coverage' meaning
4.5 years ago by bjwiley23 ▴ 40
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4.0k
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Comment: C: Might @PG headers affect downstream analyses, and how can I safely remove them f
4.5 years ago by bjwiley23 ▴ 40
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4.5k
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Comment: C: Difference between exon positions in hg19 and b37?
4.5 years ago by bjwiley23 ▴ 40
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5.5k
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Comment: C: Filtering on the minor allele in VCFtools
4.5 years ago by bjwiley23 ▴ 40
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1
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3.3k
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Comment: C: I got a problem with making normal reference using cnvkit
4.5 years ago by bjwiley23 ▴ 40
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4.3k
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Comment: C: GC model file
4.5 years ago by bjwiley23 ▴ 40
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0
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9.4k
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Comment: C: Genetic Map file format: how to understand the combined_rate column and the gene
4.5 years ago by bjwiley23 ▴ 40
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8.3k
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Comment: C: visualizing the file with BigWig format
4.6 years ago by bjwiley23 ▴ 40
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1
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4.5k
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Comment: C: RPKM and TPM calculation
4.6 years ago by bjwiley23 ▴ 40
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13k
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Comment: Comment: Infer-experiment.py, is strand-specific?
updated 3.3 years ago by 45k • written 4.7 years ago by ▴ 40
1
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27k
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Comment: C: read.table does not read in all rows!
4.7 years ago by bjwiley23 ▴ 40
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18k
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Comment: C: Biopython - calculating query coverage and Identity
4.8 years ago by bjwiley23 ▴ 40
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18k
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Comment: C: Biopython - calculating query coverage and Identity
4.8 years ago by bjwiley23 ▴ 40
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0
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12k
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Comment: C: Partial or complete overlap of two genomic ranges
4.8 years ago by bjwiley23 ▴ 40
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1
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9.7k
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Comment: C: Using The Biomart Perl Api For Simple Queries
4.8 years ago by bjwiley23 ▴ 40
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1
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1.5k
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Comment: C: getGEO not returning correct sample names
4.8 years ago by bjwiley23 ▴ 40
1
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3
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1.5k
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getGEO not returning correct sample names
getGEO R
4.8 years ago by bjwiley23 ▴ 40
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0
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4.6k
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Comment: C: RSEM calculate expression troubleshoot
4.9 years ago by bjwiley23 ▴ 40
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1
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4.6k
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Comment: C: RSEM calculate expression troubleshoot
4.9 years ago by bjwiley23 ▴ 40
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3.6k
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Comment: C: Bioperl Seqio Reset (Next_Seq())
5.0 years ago by bjwiley23 ▴ 40
1
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2
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5.6k
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Answer: A: PSSM (Position Specific Scoring Matrix) from NCBI convert to matrix format
5.1 years ago by bjwiley23 ▴ 40
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6.0k
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Comment: C: parsing BAM index (quick&dirty samtools view X.bam region)
5.3 years ago by bjwiley23 ▴ 40
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1
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5.9k
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Comment: C: What is Left align and parsimonious (VCF normalisation) ?
5.3 years ago by bjwiley23 ▴ 40
0
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1
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5.9k
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Comment: A: What is Left align and parsimonious (VCF normalisation) ?
5.3 years ago by bjwiley23 ▴ 40
37 results • Page 1 of 1
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