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Comment: C: exact command for read normalization using trinity software
updated 5.0 years ago by 44k • written 9.9 years ago by ★ 2.2k
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3.6k
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Comment: C: how to set CPU with butterfly dependency RAM (bflyHeapSpaceMax) in trinity assem
updated 5.0 years ago by 44k • written 9.9 years ago by ★ 2.2k
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5.7k
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Comment: A: samtools/bcftools/htslib 1.0 released
updated 5.0 years ago by 44k • written 10.2 years ago by ★ 2.2k
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1
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10k
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Comment: Comment: Install HGAP for de novo PacBio Assembly
updated 2.1 years ago by 44k • written 9.1 years ago by ★ 2.2k
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1
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3.5k
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Comment: C: Error with SRA downloaded reads and SPAdes 3.1.0
9.1 years ago by rtliu ★ 2.2k
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Comment: Comment: Error during Trinity running with the recent version?
updated 2.5 years ago by 44k • written 9.4 years ago by ★ 2.2k
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1
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14k
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Comment: Comment: Pacbio: extract fastq from h5 file based on quality filtering
updated 2.5 years ago by 44k • written 9.5 years ago by ★ 2.2k
1
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1
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7.2k
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Comment: C: Trimmomatic not able to remove low sequence bases
9.5 years ago by rtliu ★ 2.2k
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1
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3.6k
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Comment: Comment: Different results with BLAST depending on if subject is formatted database or FA
updated 2.3 years ago by 44k • written 9.5 years ago by ★ 2.2k
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Comment: C: What should be the minimum 454 read (single-end) length for de novo assembly run
9.9 years ago by rtliu ★ 2.2k
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1
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4.0k
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Comment: Comment: FASTQC can't detect short overrepresented sequences (e.g., less than 25 bp)?
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
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1
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2.1k
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Comment: Comment: in-house blast DB creation
updated 2.9 years ago by 44k • written 9.9 years ago by ★ 2.2k
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1
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5.8k
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Comment: Comment: MetaVelvet gets stuck at "Starting pebble resolution..." step (individually and
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
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1
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5.8k
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Comment: Comment: MetaVelvet gets stuck at "Starting pebble resolution..." step (individually and
updated 2.7 years ago by 44k • written 9.9 years ago by ★ 2.2k
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0
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6.7k
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Comment: Comment: How come that the Trinity assembler seems to work on a computer with low memory
updated 2.7 years ago by 44k • written 10.0 years ago by ★ 2.2k
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4.0k
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Comment: C: Process 50k+ sequences with Blastx for Blast2Go
10.2 years ago by rtliu ★ 2.2k
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0
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4.8k
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Comment: C: Questions about MaSuRCA assembly program
10.2 years ago by rtliu ★ 2.2k
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0
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4.5k
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Comment: C: Paired-End Overlapping With Error Correction - Which Is Better?
11.0 years ago by rtliu ★ 2.2k
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5.0k
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Comment: C: Hybrid Assembly +Gapcloser With 454 And Illumina Data
11.1 years ago by rtliu ★ 2.2k
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1
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5.0k
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Comment: C: Hybrid Assembly +Gapcloser With 454 And Illumina Data
11.1 years ago by rtliu ★ 2.2k
0
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1
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5.0k
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Comment: C: Hybrid Assembly +Gapcloser With 454 And Illumina Data
11.1 years ago by rtliu ★ 2.2k
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