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Comment: C: exact command for read normalization using trinity software
updated 4.5 years ago by 43k • written 9.4 years ago by ★ 2.2k
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Comment: C: how to set CPU with butterfly dependency RAM (bflyHeapSpaceMax) in trinity assem
updated 4.5 years ago by 43k • written 9.4 years ago by ★ 2.2k
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Comment: A: samtools/bcftools/htslib 1.0 released
updated 4.5 years ago by 43k • written 9.7 years ago by ★ 2.2k
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1
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9.7k
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Comment: Comment: Install HGAP for de novo PacBio Assembly
updated 19 months ago by 43k • written 8.6 years ago by ★ 2.2k
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3.3k
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Comment: C: Error with SRA downloaded reads and SPAdes 3.1.0
8.6 years ago by rtliu ★ 2.2k
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Comment: Comment: Error during Trinity running with the recent version?
updated 2.1 years ago by 43k • written 9.0 years ago by ★ 2.2k
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13k
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Comment: Comment: Pacbio: extract fastq from h5 file based on quality filtering
updated 2.0 years ago by 43k • written 9.0 years ago by ★ 2.2k
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1
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7.0k
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Comment: C: Trimmomatic not able to remove low sequence bases
9.1 years ago by rtliu ★ 2.2k
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3.4k
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Comment: Comment: Different results with BLAST depending on if subject is formatted database or FA
updated 22 months ago by 43k • written 9.1 years ago by ★ 2.2k
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Comment: C: What should be the minimum 454 read (single-end) length for de novo assembly run
9.4 years ago by rtliu ★ 2.2k
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1
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3.8k
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Comment: Comment: FASTQC can't detect short overrepresented sequences (e.g., less than 25 bp)?
updated 2.2 years ago by 43k • written 9.5 years ago by ★ 2.2k
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2.0k
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Comment: Comment: in-house blast DB creation
updated 2.4 years ago by 43k • written 9.5 years ago by ★ 2.2k
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1
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5.6k
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Comment: Comment: MetaVelvet gets stuck at "Starting pebble resolution..." step (individually and
updated 2.2 years ago by 43k • written 9.5 years ago by ★ 2.2k
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5.6k
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Comment: Comment: MetaVelvet gets stuck at "Starting pebble resolution..." step (individually and
updated 2.2 years ago by 43k • written 9.5 years ago by ★ 2.2k
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6.3k
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Comment: Comment: How come that the Trinity assembler seems to work on a computer with low memory
updated 2.3 years ago by 43k • written 9.6 years ago by ★ 2.2k
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Comment: C: Process 50k+ sequences with Blastx for Blast2Go
9.8 years ago by rtliu ★ 2.2k
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0
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4.7k
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Comment: C: Questions about MaSuRCA assembly program
9.8 years ago by rtliu ★ 2.2k
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4.4k
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Comment: C: Paired-End Overlapping With Error Correction - Which Is Better?
10.6 years ago by rtliu ★ 2.2k
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4.8k
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Comment: C: Hybrid Assembly +Gapcloser With 454 And Illumina Data
10.6 years ago by rtliu ★ 2.2k
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1
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4.8k
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Comment: C: Hybrid Assembly +Gapcloser With 454 And Illumina Data
10.6 years ago by rtliu ★ 2.2k
0
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1
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4.8k
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Comment: C: Hybrid Assembly +Gapcloser With 454 And Illumina Data
10.7 years ago by rtliu ★ 2.2k
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