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2
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2
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18k
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Answer: Answer: Issues installing bcl2fastq?
9 months ago by predeus ★ 2.1k
1
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0
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918
views
Answer: Answer: API way to find "Original submitter" files in SRA?
9 months ago by predeus ★ 2.1k
0
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0
replies
2.0k
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Answer: Answer: Get original format information from SRA metadata
10 months ago by predeus ★ 2.1k
0
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0
replies
1.2k
views
Answer: Answer: SRA obtained metagenomic reads appears to corrupt - cannot work on SingleM
16 months ago by predeus ★ 2.1k
2
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0
replies
879
views
Answer: Answer: How can I figure out where a mouse (C57BL/6J) genome is heterozygous?
16 months ago by predeus ★ 2.1k
0
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1
reply
947
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Answer: Answer: snRNA seq analysis - huge computational demand due to large number of entries
16 months ago by predeus ★ 2.1k
0
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0
replies
3.8k
views
Answer: Answer: HISAT2 relaxing parameters?
19 months ago by predeus ★ 2.1k
2
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0
replies
1.8k
views
Answer: Answer: Read counting in RSEM and Salmon (alignment mode)
19 months ago by predeus ★ 2.1k
0
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1
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4.0k
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Answer: Answer: SCTransform and differential gene expression
2.3 years ago by predeus ★ 2.1k
0
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0
replies
2.2k
views
Answer: Answer: Issues with Quantification with STARsolo
2.8 years ago by predeus ★ 2.1k
3
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1
reply
3.2k
views
Answer: Answer: RNA velocity for smart-seq2 dataset
3.0 years ago by predeus ★ 2.1k
1
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1
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1.7k
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Answer: Answer: sugestion nanopore assembly and illumina reads
3.4 years ago by predeus ★ 2.1k
1
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0
replies
2.4k
views
Answer: Answer: single cell sequencing data doublets removal tools selection
3.7 years ago by predeus ★ 2.1k
3
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1
reply
1.2k
views
Answer: A: TSS predator input files
3.7 years ago by predeus ★ 2.1k
1
vote
1
reply
974
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Answer: A: Telomere sequence in ncbi human genome assembly?
3.8 years ago by predeus ★ 2.1k
0
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1
reply
3.6k
views
Answer: A: Want to reverse the fasta sequence
3.8 years ago by predeus ★ 2.1k
0
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1
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3.2k
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Answer: A: GEOquery loading error.
3.8 years ago by predeus ★ 2.1k
0
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1
reply
7.5k
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Answer: A: GEO datasets-Single cell RNAseq analysis using seurat
3.8 years ago by predeus ★ 2.1k
2
votes
1
reply
5.2k
views
Answer: A: RNA-seq ribosomal genes vs proteins
3.8 years ago by predeus ★ 2.1k
3
votes
1
reply
2.0k
views
Answer: A: Suggest common programming tasks for biologists who are novice programmers
3.8 years ago by predeus ★ 2.1k
0
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1
reply
855
views
Answer: A: Searching for human genotyping data thats not public
3.8 years ago by predeus ★ 2.1k
1
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1
reply
1.1k
views
Answer: A: Best Practices for chi-seq analysis
3.8 years ago by predeus ★ 2.1k
0
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0
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4.1k
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Answer: A: Algorithm to remove batch effects
3.8 years ago by predeus ★ 2.1k
0
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1
reply
2.0k
views
Answer: A: Which aligner for human WGS
3.8 years ago by predeus ★ 2.1k
3
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0
replies
1.2k
views
Answer: A: interprating PCA plot
3.8 years ago by predeus ★ 2.1k
1
vote
0
replies
611
views
Answer: A: RNA Seq: Outlier gene counts
3.8 years ago by predeus ★ 2.1k
0
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0
replies
2.6k
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Answer: A: Tools for scRNAseq
3.9 years ago by predeus ★ 2.1k
1
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0
replies
4.4k
views
Answer: A: How to get input for provean from vcf files annotated by snpeff?
4.1 years ago by predeus ★ 2.1k
1
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1
reply
4.7k
views
Answer: A: Heatmap from the RNAseq raw count data
4.5 years ago by predeus ★ 2.1k
0
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1
reply
1.4k
views
Answer: A: How can I fix frameshift errors in assembled genome?
4.7 years ago by predeus ★ 2.1k
4
votes
2
replies
9.7k
views
Answer: A: Too late to switch to Bioinformatics?
updated 4.9 years ago by 44k • written 10.5 years ago by ★ 2.1k
1
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1
reply
4.8k
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Answer: A: Use esearch/efetch to output relationship table of GSM to SRR (bascially SRA fil
updated 4.9 years ago by 44k • written 10.5 years ago by ★ 2.1k
0
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1
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4.1k
views
Answer: A: Tools for metagenomics classification using long reads
4.9 years ago by predeus ★ 2.1k
0
votes
0
replies
1.8k
views
Answer: A: Trinity RSEM Bowtie2 align_and_estimate_abundance script error
5.2 years ago by predeus ★ 2.1k
2
votes
1
reply
3.2k
views
Answer: A: Sequence duplication levels in de-novo assemblies
5.2 years ago by predeus ★ 2.1k
0
votes
2
replies
1.9k
views
Answer: A: Principal Component Analysis PCA
5.2 years ago by predeus ★ 2.1k
1
vote
0
replies
3.2k
views
Answer: A: Best strategy to get GO terms for a proteome?
5.2 years ago by predeus ★ 2.1k
0
votes
0
replies
3.9k
views
Answer: A: RepeatMasker on new species
5.4 years ago by predeus ★ 2.1k
4
votes
2
replies
9.3k
views
Answer: A: samtools markdup vs PICARD's MarkDuplicates when removing duplicated reads
5.4 years ago by predeus ★ 2.1k
1
vote
0
replies
1.4k
views
Answer: A: Is there some good software to align/compare fasta sequences in my PC
5.4 years ago by predeus ★ 2.1k
0
votes
0
replies
931
views
Answer: A: Looking for the best plot for overlapping features
5.4 years ago by predeus ★ 2.1k
4
votes
0
replies
7.1k
views
Answer: A: How to circularize genome assemblies
5.5 years ago by predeus ★ 2.1k
1
vote
0
replies
1.9k
views
Answer: A: When will the HG 19/ GRC37 finally become obsolete
5.5 years ago by predeus ★ 2.1k
1
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0
replies
6.3k
views
Answer: A: which matrix should be used to draw heatmap in RNAseq?
5.5 years ago by predeus ★ 2.1k
0
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0
replies
1.2k
views
Answer: A: Number of genes in a kegg pathway
5.5 years ago by predeus ★ 2.1k
2
votes
0
replies
3.5k
views
Answer: A: Is computing TPM from read count from DEseq2 count matrix necessary?
5.5 years ago by predeus ★ 2.1k
1
vote
0
replies
4.0k
views
Answer: A: Hybrid assembly using MinION data + correction with Illumina. Which strategy to
5.5 years ago by predeus ★ 2.1k
0
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1
reply
1.4k
views
Answer: A: Interpretation of several pairwise overlaps
5.5 years ago by predeus ★ 2.1k
5
votes
1
reply
8.0k
views
Answer: A: Batch effect correction
5.5 years ago by predeus ★ 2.1k
2
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0
replies
2.4k
views
Answer: A: plasmid recovery from hybrid assembly
5.5 years ago by predeus ★ 2.1k
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