Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : all
0
votes
0
replies
2.6k
views
Comment: Comment: When to use .vcf or .gvcf files from GATK HaplotypeCaller?
2 days ago by Medhat 9.7k
0
votes
0
replies
983
views
Comment: Comment: guppy basecaller giving error while basecalling
10 months ago by Medhat 9.7k
0
votes
0
replies
627
views
Comment: Comment: More Efficient: Whole Genome VCF splitting with and without tbi file
10 months ago by Medhat 9.7k
3
votes
1
reply
701
views
Answer: Answer: Need help editing text in the shell
10 months ago by Medhat 9.7k
1
vote
0
replies
1.2k
views
Comment: Comment: What are your preferred programs for processing DNA long reads? (de novo assembl
10 months ago by Medhat 9.7k
0
votes
1
reply
1.2k
views
Comment: Comment: Why some insertions are symbolic in ALT column?
10 months ago by Medhat 9.7k
0
votes
1
reply
1.5k
views
Comment: Comment: Problem with GPU guppy_basecaller and SLURM
11 months ago by Medhat 9.7k
0
votes
1
reply
1.5k
views
Comment: Comment: Problem with GPU guppy_basecaller and SLURM
11 months ago by Medhat 9.7k
0
votes
0
replies
697
views
Comment: Comment: Variant calling analysis
11 months ago by Medhat 9.7k
1
vote
1
reply
697
views
Comment: Comment: Variant calling analysis
11 months ago by Medhat 9.7k
0
votes
0
replies
537
views
Comment: Comment: Do we have any disease specific SNVs database?
14 months ago by Medhat 9.7k
0
votes
0
replies
5.0k
views
Comment: Comment: conda create env using .yml file leads to dependency conflicts
14 months ago by Medhat 9.7k
0
votes
1
reply
1.6k
views
Comment: Comment: GATK showing error of reference file index
14 months ago by Medhat 9.7k
0
votes
0
replies
523
views
Comment: Comment: Methods for downsampling coverage in a VCF
14 months ago by Medhat 9.7k
0
votes
1
reply
914
views
Comment: Comment: I have a reference genome explained by accession number instead of chromosome nu
15 months ago by Medhat 9.7k
1
vote
2
replies
2.4k
views
Comment: Comment: SV calling using giraffe/vg
15 months ago by Medhat 9.7k
4
votes
0
replies
748
views
Comment: Comment: BIOINFORMATICS
15 months ago by Medhat 9.7k
2
votes
0
replies
871
views
Comment: Comment: Looking for tools to individuate gene-gene correlations from a few candidates
16 months ago by Medhat 9.7k
0
votes
0
replies
974
views
Comment: Comment: No CR tag in the sam file mapped by STARsolo (10x v3.1 data)
16 months ago by Medhat 9.7k
0
votes
0
replies
1.7k
views
Comment: Comment: Different results in finding human sequences from metagenomes (bowtie2 and Krake
17 months ago by Medhat 9.7k
0
votes
0
replies
1.1k
views
Comment: Comment: bedtools intersect multiple files using for loop
17 months ago by Medhat 9.7k
1
vote
1
reply
1.1k
views
Comment: Comment: bedtools intersect multiple files using for loop
17 months ago by Medhat 9.7k
0
votes
0
replies
901
views
Comment: Comment: Postdoctoral Associate , Baylor College of Medicine, Human Genome Sequencing Cen
17 months ago by Medhat 9.7k
0
votes
1
reply
901
views
Job: Postdoctoral Associate , Baylor College of Medicine, Human Genome Sequencing Center, Houston, United States
NGS TGS
updated 10 months ago by 43k • written 22 months ago by 9.7k
0
votes
1
reply
1.2k
views
Comment: Comment: Introducing Cramino: a *fast* QC tool for long reads
18 months ago by Medhat 9.7k
0
votes
1
reply
942
views
Comment: Comment: For loop RNA Sequencing alignment
18 months ago by Medhat 9.7k
2
votes
0
replies
1.2k
views
Comment: Comment: sorting multiple .bam files in linux cluster
20 months ago by Medhat 9.7k
0
votes
0
replies
1.0k
views
Comment: Comment: gosling.js and React 1.7+
20 months ago by Medhat 9.7k
0
votes
1
reply
1.0k
views
Comment: Comment: gosling.js and React 1.7+
20 months ago by Medhat 9.7k
1
vote
1
reply
1.1k
views
Comment: Comment: Leaky RNA
20 months ago by Medhat 9.7k
0
votes
0
replies
917
views
Comment: Comment: Staff Scientist - Bioinformatician, Baylor College of Medicine, Human Genome Seq
21 months ago by Medhat 9.7k
0
votes
1
reply
1.3k
views
Comment: Comment: Biopython Code to Convert DNA FASTA file to Protein FASTA file
21 months ago by Medhat 9.7k
0
votes
0
replies
830
views
Comment: Comment: getting the coordinates of mapped regions from a bam file
22 months ago by Medhat 9.7k
1
vote
0
replies
1.3k
views
Comment: Comment: Programming languages in industry
22 months ago by Medhat 9.7k
0
votes
0
replies
1.3k
views
Comment: Comment: Programming languages in industry
22 months ago by Medhat 9.7k
2
votes
1
reply
1.3k
views
Answer: Answer: Programming languages in industry
22 months ago by Medhat 9.7k
0
votes
1
reply
917
views
Job: Staff Scientist - Bioinformatician, Baylor College of Medicine, Human Genome Sequencing Center, Houston, United States
NGS TGS
updated 10 months ago by 43k • written 22 months ago by 9.7k
4
votes
3
replies
2.9k
views
Split VCF file
vcf sequencing
written 7.3 years ago by 9.7k
0
votes
0
replies
941
views
Comment: Comment: Source of soft clipped reads from target sequencing
23 months ago by Medhat 9.7k
1
vote
0
replies
1.6k
views
Answer: Answer: VCF Statistics
23 months ago by Medhat 9.7k
0
votes
1
reply
583
views
Comment: Comment: Align chimpanzee genome
24 months ago by Medhat 9.7k
2
votes
2
replies
2.6k
views
Answer: Answer: When to use .vcf or .gvcf files from GATK HaplotypeCaller?
24 months ago by Medhat 9.7k
0
votes
0
replies
1000
views
Job: Postdoctoral Fellow Pacific Northwest Research Institute (PNRI) in Seattle
variants NGS
updated 22 months ago by 43k • written 24 months ago by 9.7k
1
vote
0
replies
764
views
Comment: Comment: How to generate a bam file with reads of only a certain length?
2.0 years ago by Medhat 9.7k
1
vote
1
reply
764
views
Comment: Comment: How to generate a bam file with reads of only a certain length?
2.0 years ago by Medhat 9.7k
0
votes
0
replies
715
views
Comment: Comment: how to visulize structure variants
2.0 years ago by Medhat 9.7k
2
votes
1
reply
715
views
Answer: Answer: how to visulize structure variants
2.0 years ago by Medhat 9.7k
1
vote
2
replies
4.7k
views
Using PRINSEQ lite with zipped paired-end illumina reads
prinseq next-gen-sequencing quality-reads Illumina
updated 2.0 years ago by • 0 • written 9.6 years ago by 9.7k
0
votes
0
replies
960
views
Comment: Comment: liftOver input file
2.2 years ago by Medhat 9.7k
0
votes
0
replies
1.7k
views
Comment: Comment: How to extract reads that support the structural variants using the vcf file and
2.2 years ago by Medhat 9.7k
1,008 results • Page 1 of 21
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6