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Comment: Comment: Using SSL (Secure Sockets Layer) for PHG
16 months ago by lcj34 ▴ 420
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938
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Comment: Comment: How to get reference lines haplotype path from PHG
16 months ago by lcj34 ▴ 420
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1
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938
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Comment: Comment: How to get reference lines haplotype path from PHG
17 months ago by lcj34 ▴ 420
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1.7k
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Comment: Comment: How to look up gene names using SNP locations on Practical Haplotype Graph
17 months ago by lcj34 ▴ 420
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1
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1.7k
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Comment: Comment: How to look up gene names using SNP locations on Practical Haplotype Graph
17 months ago by lcj34 ▴ 420
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1
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3.7k
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Comment: Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
19 months ago by lcj34 ▴ 420
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1
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3.7k
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Comment: Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
19 months ago by lcj34 ▴ 420
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3.7k
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Comment: Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
19 months ago by lcj34 ▴ 420
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1
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3.7k
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Comment: Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
19 months ago by lcj34 ▴ 420
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1
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3.7k
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Comment: Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
20 months ago by lcj34 ▴ 420
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1
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3.7k
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Comment: Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
20 months ago by lcj34 ▴ 420
1
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1
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3.7k
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Comment: Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
20 months ago by lcj34 ▴ 420
0
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1
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3.7k
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Comment: Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
20 months ago by lcj34 ▴ 420
0
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1
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3.7k
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Comment: Comment: error when running phg create-maf-vcf to build a built practical haplotype graph
20 months ago by lcj34 ▴ 420
1
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0
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737
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Answer: Answer: adding new assemblies to previously built practical haplotype graph (v2)
20 months ago by lcj34 ▴ 420
1
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0
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1.9k
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Comment: Comment: Errors running PHG MakeInitialPHGDBPipelinePlugin (**UNASSIGNED**)
20 months ago by lcj34 ▴ 420
1
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1
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1.9k
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Comment: Comment: Errors running PHG MakeInitialPHGDBPipelinePlugin (**UNASSIGNED**)
20 months ago by lcj34 ▴ 420
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2
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1.9k
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Comment: Comment: Errors running PHG MakeInitialPHGDBPipelinePlugin (**UNASSIGNED**)
20 months ago by lcj34 ▴ 420
0
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1
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1.9k
views
Comment: Comment: Errors running PHG MakeInitialPHGDBPipelinePlugin (**UNASSIGNED**)
20 months ago by lcj34 ▴ 420
1
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1
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1.9k
views
Answer: Answer: Errors running PHG MakeInitialPHGDBPipelinePlugin (**UNASSIGNED**)
20 months ago by lcj34 ▴ 420
2
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0
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843
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Answer: Answer: how to add non-reference genes to BED file of intervals for PHG
20 months ago by lcj34 ▴ 420
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0
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1.3k
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Comment: Comment: Practical Haplotype Graph
20 months ago by lcj34 ▴ 420
1
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1
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1.3k
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Answer: Answer: Practical Haplotype Graph
20 months ago by lcj34 ▴ 420
1
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1
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3.9k
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Comment: Comment: Practical Haplotype Graph Paths
21 months ago by lcj34 ▴ 420
1
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1
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3.9k
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Comment: Comment: Practical Haplotype Graph Paths
22 months ago by lcj34 ▴ 420
1
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1
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3.9k
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Comment: Comment: Practical Haplotype Graph Paths
22 months ago by lcj34 ▴ 420
1
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1
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3.9k
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Comment: Comment: Practical Haplotype Graph Paths
22 months ago by lcj34 ▴ 420
2
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0
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741
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Answer: Answer: AssemblyMAFFromAnchorWavePlugin IndexOutOfBoundsException
23 months ago by lcj34 ▴ 420
2
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1
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996
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Answer: Answer: PopulatePHGDBPipelinePlugin fails on example database
24 months ago by lcj34 ▴ 420
2
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1
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3.9k
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Answer: Answer: Practical Haplotype Graph Paths
24 months ago by lcj34 ▴ 420
0
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0
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827
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Answer: Answer: Unknown error using MAFToGVCF Plugin from practical haplotype graph (phg) and ta
2.1 years ago by lcj34 ▴ 420
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1
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1.1k
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Answer: Answer: VCF file from PHG for loading into BreedBase
2.3 years ago by lcj34 ▴ 420
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0
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942
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Comment: Comment: Error occured at the PHG imputation step: allele in genotype not in the variant
2.4 years ago by lcj34 ▴ 420
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1
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1.7k
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Comment: Comment: Impute haplotypes (ImputePipelinePlugin) execution error - PHG
2.5 years ago by lcj34 ▴ 420
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1
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1.7k
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Comment: Comment: Impute haplotypes (ImputePipelinePlugin) execution error - PHG
2.5 years ago by lcj34 ▴ 420
0
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1
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1.7k
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Answer: Answer: Impute haplotypes (ImputePipelinePlugin) execution error - PHG
2.5 years ago by lcj34 ▴ 420
1
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0
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1.7k
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Answer: Answer: Expected number of haplotype IDs per path in PHG
2.5 years ago by lcj34 ▴ 420
0
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0
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763
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Comment: Comment: PHG - Error in encodePathArrayFromSet()
2.5 years ago by lcj34 ▴ 420
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0
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1.7k
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Comment: Comment: Expected number of haplotype IDs per path in PHG
2.6 years ago by lcj34 ▴ 420
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1
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1.7k
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Comment: Comment: Expected number of haplotype IDs per path in PHG
2.6 years ago by lcj34 ▴ 420
0
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1
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2.3k
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Comment: Comment: Java -xmx option does not limit memory usage in the ImputePipelinePlugin?
2.6 years ago by lcj34 ▴ 420
0
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0
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1.5k
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Answer: Answer: Practical Haplotype Graph -- Pathing Error
2.7 years ago by lcj34 ▴ 420
0
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1
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2.0k
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Answer: Answer: PHG -imputeTarget pathToVCF plugin not writing expected output files?
2.7 years ago by lcj34 ▴ 420
0
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0
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1.5k
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Comment: Comment: Practical Haplotype Graph -- Pathing Error
2.7 years ago by lcj34 ▴ 420
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0
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1.7k
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Answer: Answer: PHG Load haplotype and create consensus
2.7 years ago by lcj34 ▴ 420
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1
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2.6k
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Comment: Comment: Can PHG handle spanning deletions in GVCF genotypes?
2.7 years ago by lcj34 ▴ 420
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1
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1.5k
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Comment: Comment: Practical Haplotype Graph -- Pathing Error
2.7 years ago by lcj34 ▴ 420
1
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0
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4.0k
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Comment: Comment: Practical Haplotype Graph Consensus and Imputation Specifications
2.7 years ago by lcj34 ▴ 420
1
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1
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1.1k
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Answer: Answer: Incorrect gvcfServerPath for reference genome
updated 2.7 years ago by 154k • written 2.7 years ago by ▴ 420
1
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1
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3.4k
views
Comment: Comment: imputing haplotypes from variants in a VCF file - vcfIndexFile
2.7 years ago by lcj34 ▴ 420
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