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Comment: Comment: Why are the basics so complicated? Basic coverage filtering for VCF files
19 days ago by DBScan ▴ 300
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802
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Comment: Comment: t-test in two groups, multiple rows
6 weeks ago by DBScan ▴ 300
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395
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Comment: Comment: HLA genotyping of whole genome sequencing data
8 weeks ago by DBScan ▴ 300
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348
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Comment: Comment: CNV benchmarking: Truvari & HG002 SVs v0.6 (GIAB)
8 weeks ago by DBScan ▴ 300
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348
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Comment: Comment: CNV benchmarking: Truvari & HG002 SVs v0.6 (GIAB)
8 weeks ago by DBScan ▴ 300
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820
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Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
9 weeks ago by DBScan ▴ 300
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820
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Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
9 weeks ago by DBScan ▴ 300
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260
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Comment: Comment: Snakemake Wildcard Issue: Trouble Passing Config Field to Rule Input
10 weeks ago by DBScan ▴ 300
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471
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Comment: Comment: PCA from plink2 for SGDP using a pangenome and DeepVariant
10 weeks ago by DBScan ▴ 300
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471
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Comment: Comment: PCA from plink2 for SGDP using a pangenome and DeepVariant
11 weeks ago by DBScan ▴ 300
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471
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Comment: Comment: PCA from plink2 for SGDP using a pangenome and DeepVariant
11 weeks ago by DBScan ▴ 300
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655
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Comment: Comment: difference betwween hail and plink
11 weeks ago by DBScan ▴ 300
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594
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Comment: Comment: PCA plot interpretation (single population)
12 weeks ago by DBScan ▴ 300
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499
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Comment: Comment: Normal number of variants to lose during liftover: GRCh38 to hg19
3 months ago by DBScan ▴ 300
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705
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Comment: Comment: Problem with DRAGEN RNAseq hashtable directory
3 months ago by DBScan ▴ 300
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704
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Comment: Comment: GIAB Benchmarking
3 months ago by DBScan ▴ 300
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629
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Comment: Comment: Calculating number of SNPs in linkage disequilibrium at different thresholds fro
3 months ago by DBScan ▴ 300
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417
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Comment: Comment: GATK version check failed
3 months ago by DBScan ▴ 300
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894
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Comment: Comment: Problem in installing 'magick' R package
5 months ago by DBScan ▴ 300
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595
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Comment: Comment: Saving the output of LD pruning from SNPRelate package as a new GDS file
7 months ago by DBScan ▴ 300
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1.2k
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Comment: Comment: T2T fixed GRCg38 gaps and issues, gaps genomic coordinates.
8 months ago by DBScan ▴ 300
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1.2k
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Comment: Comment: T2T fixed GRCg38 gaps and issues, gaps genomic coordinates.
8 months ago by DBScan ▴ 300
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1
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750
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Comment: Comment: bcftools view to failed reader data
9 months ago by DBScan ▴ 300
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3.0k
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Comment: Comment: Conda/Mamba environment activation error
9 months ago by DBScan ▴ 300
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1.1k
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Comment: Comment: Qualimap multi-bamqc input file
9 months ago by DBScan ▴ 300
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1.1k
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Comment: Comment: Qualimap multi-bamqc input file
9 months ago by DBScan ▴ 300
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1
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696
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Comment: Comment: whole genome sequencing and assembly
9 months ago by DBScan ▴ 300
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696
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Comment: Comment: whole genome sequencing and assembly
9 months ago by DBScan ▴ 300
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1
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711
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Comment: Comment: Deepvariant and input CRAM files
9 months ago by DBScan ▴ 300
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775
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Comment: Comment: Launched: Genozip 15 with co-compression of BAM and FASTQ
10 months ago by DBScan ▴ 300
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1
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821
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Comment: Comment: Snakemake cyclic dependency for gather operations
2.2 years ago by DBScan ▴ 300
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2.6k
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Comment: Comment: vcf file summary
2.7 years ago by DBScan ▴ 300
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1.3k
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Comment: C: ChIPQC error when running example from documentation
3.6 years ago by DBScan ▴ 300
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1
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993
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Comment: C: Calculating pathway activity from TCGA RPPA data
3.7 years ago by DBScan ▴ 300
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2.5k
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Comment: C: awk column number is a variable
updated 3.8 years ago by 161k • written 3.8 years ago by ▴ 300
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