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2
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1
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12k
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Answer: Answer: Parabricks : Number of GPUs requested (2) is more than number of GPUs (0) in the
9 days ago by DBScan ▴ 530
6
votes
1
reply
814
views
hg38 vs GRCh38 chr prefix
human genome reference
updated 8 weeks ago by 153k • written 8 weeks ago by ▴ 530
1
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0
replies
687
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Answer: Answer: Joint Calling for Large Germline WGS Cohort
10 weeks ago by DBScan ▴ 530
1
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0
replies
567
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Answer: Answer: Error running pbrun fq2bam: No space left on device
11 weeks ago by DBScan ▴ 530
0
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0
replies
5.6k
views
Answer: Answer: bcftools query add header
4 months ago by DBScan ▴ 530
0
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1
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1.1k
views
Comment: Comment: DRAGEN FILTER
4 months ago by DBScan ▴ 530
1
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0
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588
views
Comment: Comment: Using Principal Components may muddle the detecting power of a GWAS?
5 months ago by DBScan ▴ 530
0
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1
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764
views
Comment: Comment: Snakemake Global Environment Container
5 months ago by DBScan ▴ 530
0
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1
reply
764
views
Comment: Comment: Snakemake Global Environment Container
5 months ago by DBScan ▴ 530
0
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1
reply
391
views
Fast querying of variant metrics with database
python database
updated 6 months ago by 166k • written 6 months ago by ▴ 530
2
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0
replies
905
views
Answer: Answer: Snakemake version 8.27.1 on LSF cluster
7 months ago by DBScan ▴ 530
0
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0
replies
940
views
Comment: Comment: Giraffe DeepVariant workflow
9 months ago by DBScan ▴ 530
2
votes
2
replies
940
views
Giraffe DeepVariant workflow
deepvariant vg giraffe
updated 10 months ago by 103k • written 10 months ago by ▴ 530
0
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1
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947
views
Comment: Comment: bcftools/vt split multiallelics - split GT along with splitting multi-allelics
11 months ago by DBScan ▴ 530
1
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1
reply
3.4k
views
Answer: Answer: RNA-Seq mutation calling without germline data
11 months ago by DBScan ▴ 530
0
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0
replies
961
views
Answer: Answer: Removing conda environment created in a snakemake workflow
11 months ago by DBScan ▴ 530
2
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0
replies
1.4k
views
Answer: Answer: Ancestry estimation using 1000 genomes as reference
12 months ago by DBScan ▴ 530
3
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0
replies
1.7k
views
Answer: Answer: are illumina fastq files typically split by lane?
13 months ago by DBScan ▴ 530
1
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1
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1.0k
views
Comment: Comment: How to fix this error while performing QC in PLINK "Warning: 228 het. haploid g
13 months ago by DBScan ▴ 530
3
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1
reply
1.4k
views
Answer: Answer: Seeking Advice on Multisample Variant Calling Pipeline with BWA-MEME and GATK DR
14 months ago by DBScan ▴ 530
1
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0
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837
views
Answer: Answer: batchtools_slurm job setting with seurat
14 months ago by DBScan ▴ 530
0
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0
replies
2.5k
views
Answer: Answer: looking for 1000g hg38 reference data to anchor with my genomic data to plot th
14 months ago by DBScan ▴ 530
2
votes
3
replies
906
views
Snakemake rule to copy files
snakemake
updated 14 months ago by ▴ 540 • written 14 months ago by ▴ 530
2
votes
0
replies
906
views
Answer: Answer: Snakemake rule to copy files
14 months ago by DBScan ▴ 530
0
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1
reply
754
views
Answer: Answer: Add tags/ header lines to a vcf file
15 months ago by DBScan ▴ 530
0
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1
reply
1.7k
views
Comment: Comment: Asking for parallel jobs setting on HPC when analyzing sequencing data
15 months ago by DBScan ▴ 530
2
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1
reply
1.7k
views
Comment: Comment: Asking for parallel jobs setting on HPC when analyzing sequencing data
15 months ago by DBScan ▴ 530
1
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1
reply
1.6k
views
Comment: Comment: How to get the ratio of allele counts from GATK derived VCF file?
16 months ago by DBScan ▴ 530
0
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0
replies
718
views
Comment: Comment: DRAGEN gVCF files and joint calling GATK-GenomicsDB
16 months ago by DBScan ▴ 530
0
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0
replies
2.4k
views
Comment: Comment: Why are the basics so complicated? Basic coverage filtering for VCF files
17 months ago by DBScan ▴ 530
0
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0
replies
2.2k
views
Comment: Comment: t-test in two groups, multiple rows
18 months ago by DBScan ▴ 530
0
votes
0
replies
2.2k
views
Answer: Answer: gnomAD4.0 Hail Table Downloading
18 months ago by DBScan ▴ 530
1
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0
replies
1.3k
views
Comment: Comment: HLA genotyping of whole genome sequencing data
18 months ago by DBScan ▴ 530
3
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1
reply
4.8k
views
Answer: Answer: Nextflow and self-made pipelines opinion
18 months ago by DBScan ▴ 530
1
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0
replies
1.2k
views
Comment: Comment: CNV benchmarking: Truvari & HG002 SVs v0.6 (GIAB)
18 months ago by DBScan ▴ 530
0
votes
1
reply
1.2k
views
Comment: Comment: CNV benchmarking: Truvari & HG002 SVs v0.6 (GIAB)
18 months ago by DBScan ▴ 530
0
votes
1
reply
3.5k
views
Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
19 months ago by DBScan ▴ 530
0
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1
reply
3.5k
views
Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
19 months ago by DBScan ▴ 530
0
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1
reply
1.4k
views
Answer: Answer: how to extract variants from the vcf.gz files linked below?
19 months ago by DBScan ▴ 530
0
votes
1
reply
666
views
Comment: Comment: Snakemake Wildcard Issue: Trouble Passing Config Field to Rule Input
19 months ago by DBScan ▴ 530
0
votes
0
replies
1.5k
views
Comment: Comment: PCA from plink2 for SGDP using a pangenome and DeepVariant
19 months ago by DBScan ▴ 530
0
votes
1
reply
1.5k
views
Comment: Comment: PCA from plink2 for SGDP using a pangenome and DeepVariant
19 months ago by DBScan ▴ 530
0
votes
1
reply
1.5k
views
Comment: Comment: PCA from plink2 for SGDP using a pangenome and DeepVariant
19 months ago by DBScan ▴ 530
0
votes
0
replies
2.4k
views
Comment: Comment: difference betwween hail and plink
19 months ago by DBScan ▴ 530
1
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1
reply
1.2k
views
Answer: Answer: What is the best GWAS tool to use for a very large cohort data (UK Biobank data)
19 months ago by DBScan ▴ 530
0
votes
1
reply
2.0k
views
Comment: Comment: PCA plot interpretation (single population)
19 months ago by DBScan ▴ 530
0
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1
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1.8k
views
Answer: Answer: fill-from-fasta doesnt fill missing values in REF
20 months ago by DBScan ▴ 530
0
votes
0
replies
1.5k
views
Comment: Comment: Normal number of variants to lose during liftover: GRCh38 to hg19
20 months ago by DBScan ▴ 530
1
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1
reply
1.3k
views
Answer: Answer: Suggestions for a simpler solution for collecting snakemake rule output in a tex
20 months ago by DBScan ▴ 530
0
votes
0
replies
2.2k
views
Comment: Comment: Problem with DRAGEN RNAseq hashtable directory
20 months ago by DBScan ▴ 530
100 results • Page 1 of 2
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