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2
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1
reply
13k
views
Answer: Answer: Parabricks : Number of GPUs requested (2) is more than number of GPUs (0) in the
7 weeks ago by DBScan ▴ 530
6
votes
1
reply
943
views
hg38 vs GRCh38 chr prefix
human genome reference
updated 3 months ago by 154k • written 3 months ago by ▴ 530
1
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0
replies
898
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Answer: Answer: Joint Calling for Large Germline WGS Cohort
3 months ago by DBScan ▴ 530
1
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0
replies
642
views
Answer: Answer: Error running pbrun fq2bam: No space left on device
4 months ago by DBScan ▴ 530
0
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0
replies
5.9k
views
Answer: Answer: bcftools query add header
5 months ago by DBScan ▴ 530
0
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1
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1.3k
views
Comment: Comment: DRAGEN FILTER
6 months ago by DBScan ▴ 530
1
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0
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672
views
Comment: Comment: Using Principal Components may muddle the detecting power of a GWAS?
6 months ago by DBScan ▴ 530
0
votes
1
reply
887
views
Comment: Comment: Snakemake Global Environment Container
6 months ago by DBScan ▴ 530
0
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1
reply
887
views
Comment: Comment: Snakemake Global Environment Container
6 months ago by DBScan ▴ 530
0
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1
reply
470
views
Fast querying of variant metrics with database
python database
updated 8 months ago by 166k • written 8 months ago by ▴ 530
2
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0
replies
1.2k
views
Answer: Answer: Snakemake version 8.27.1 on LSF cluster
8 months ago by DBScan ▴ 530
0
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0
replies
1.1k
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Comment: Comment: Giraffe DeepVariant workflow
11 months ago by DBScan ▴ 530
2
votes
2
replies
1.1k
views
Giraffe DeepVariant workflow
deepvariant vg giraffe
updated 11 months ago by 103k • written 11 months ago by ▴ 530
0
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1
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1.1k
views
Comment: Comment: bcftools/vt split multiallelics - split GT along with splitting multi-allelics
13 months ago by DBScan ▴ 530
1
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1
reply
3.9k
views
Answer: Answer: RNA-Seq mutation calling without germline data
13 months ago by DBScan ▴ 530
0
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0
replies
1.1k
views
Answer: Answer: Removing conda environment created in a snakemake workflow
13 months ago by DBScan ▴ 530
2
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0
replies
1.6k
views
Answer: Answer: Ancestry estimation using 1000 genomes as reference
14 months ago by DBScan ▴ 530
3
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0
replies
1.9k
views
Answer: Answer: are illumina fastq files typically split by lane?
14 months ago by DBScan ▴ 530
1
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1
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1.2k
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Comment: Comment: How to fix this error while performing QC in PLINK "Warning: 228 het. haploid g
14 months ago by DBScan ▴ 530
3
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1
reply
1.6k
views
Answer: Answer: Seeking Advice on Multisample Variant Calling Pipeline with BWA-MEME and GATK DR
15 months ago by DBScan ▴ 530
1
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0
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939
views
Answer: Answer: batchtools_slurm job setting with seurat
15 months ago by DBScan ▴ 530
0
votes
0
replies
2.9k
views
Answer: Answer: looking for 1000g hg38 reference data to anchor with my genomic data to plot th
15 months ago by DBScan ▴ 530
2
votes
3
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1000
views
Snakemake rule to copy files
snakemake
updated 15 months ago by ▴ 540 • written 15 months ago by ▴ 530
2
votes
0
replies
1000
views
Answer: Answer: Snakemake rule to copy files
15 months ago by DBScan ▴ 530
0
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1
reply
815
views
Answer: Answer: Add tags/ header lines to a vcf file
17 months ago by DBScan ▴ 530
0
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1
reply
1.9k
views
Comment: Comment: Asking for parallel jobs setting on HPC when analyzing sequencing data
17 months ago by DBScan ▴ 530
2
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1
reply
1.9k
views
Comment: Comment: Asking for parallel jobs setting on HPC when analyzing sequencing data
17 months ago by DBScan ▴ 530
1
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1
reply
1.7k
views
Comment: Comment: How to get the ratio of allele counts from GATK derived VCF file?
17 months ago by DBScan ▴ 530
0
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0
replies
795
views
Comment: Comment: DRAGEN gVCF files and joint calling GATK-GenomicsDB
17 months ago by DBScan ▴ 530
0
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0
replies
2.7k
views
Comment: Comment: Why are the basics so complicated? Basic coverage filtering for VCF files
19 months ago by DBScan ▴ 530
0
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0
replies
2.3k
views
Comment: Comment: t-test in two groups, multiple rows
19 months ago by DBScan ▴ 530
0
votes
0
replies
2.5k
views
Answer: Answer: gnomAD4.0 Hail Table Downloading
19 months ago by DBScan ▴ 530
1
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0
replies
1.5k
views
Comment: Comment: HLA genotyping of whole genome sequencing data
20 months ago by DBScan ▴ 530
3
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1
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5.2k
views
Answer: Answer: Nextflow and self-made pipelines opinion
20 months ago by DBScan ▴ 530
1
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0
replies
1.4k
views
Comment: Comment: CNV benchmarking: Truvari & HG002 SVs v0.6 (GIAB)
20 months ago by DBScan ▴ 530
0
votes
1
reply
1.4k
views
Comment: Comment: CNV benchmarking: Truvari & HG002 SVs v0.6 (GIAB)
20 months ago by DBScan ▴ 530
0
votes
1
reply
3.8k
views
Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
20 months ago by DBScan ▴ 530
0
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1
reply
3.8k
views
Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
20 months ago by DBScan ▴ 530
0
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1
reply
1.5k
views
Answer: Answer: how to extract variants from the vcf.gz files linked below?
20 months ago by DBScan ▴ 530
0
votes
1
reply
751
views
Comment: Comment: Snakemake Wildcard Issue: Trouble Passing Config Field to Rule Input
20 months ago by DBScan ▴ 530
0
votes
0
replies
1.6k
views
Comment: Comment: PCA from plink2 for SGDP using a pangenome and DeepVariant
20 months ago by DBScan ▴ 530
0
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1
reply
1.6k
views
Comment: Comment: PCA from plink2 for SGDP using a pangenome and DeepVariant
21 months ago by DBScan ▴ 530
0
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1
reply
1.6k
views
Comment: Comment: PCA from plink2 for SGDP using a pangenome and DeepVariant
21 months ago by DBScan ▴ 530
0
votes
0
replies
2.6k
views
Comment: Comment: difference betwween hail and plink
21 months ago by DBScan ▴ 530
1
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1
reply
1.3k
views
Answer: Answer: What is the best GWAS tool to use for a very large cohort data (UK Biobank data)
21 months ago by DBScan ▴ 530
0
votes
1
reply
2.1k
views
Comment: Comment: PCA plot interpretation (single population)
21 months ago by DBScan ▴ 530
0
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1
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1.9k
views
Answer: Answer: fill-from-fasta doesnt fill missing values in REF
21 months ago by DBScan ▴ 530
0
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0
replies
1.7k
views
Comment: Comment: Normal number of variants to lose during liftover: GRCh38 to hg19
21 months ago by DBScan ▴ 530
1
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1
reply
1.3k
views
Answer: Answer: Suggestions for a simpler solution for collecting snakemake rule output in a tex
21 months ago by DBScan ▴ 530
0
votes
0
replies
2.4k
views
Comment: Comment: Problem with DRAGEN RNAseq hashtable directory
21 months ago by DBScan ▴ 530
100 results • Page 1 of 2
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