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Comment: Comment: Why are the basics so complicated? Basic coverage filtering for VCF files
5 weeks ago by DBScan ▴ 300
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837
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Comment: Comment: t-test in two groups, multiple rows
8 weeks ago by DBScan ▴ 300
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433
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Comment: Comment: HLA genotyping of whole genome sequencing data
11 weeks ago by DBScan ▴ 300
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377
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Comment: Comment: CNV benchmarking: Truvari & HG002 SVs v0.6 (GIAB)
11 weeks ago by DBScan ▴ 300
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377
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Comment: Comment: CNV benchmarking: Truvari & HG002 SVs v0.6 (GIAB)
11 weeks ago by DBScan ▴ 300
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910
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Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
12 weeks ago by DBScan ▴ 300
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910
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Comment: Comment: jellyfish installed in conda, but 'command not found' when I try to run it
12 weeks ago by DBScan ▴ 300
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267
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Comment: Comment: Snakemake Wildcard Issue: Trouble Passing Config Field to Rule Input
3 months ago by DBScan ▴ 300
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500
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Comment: Comment: PCA from plink2 for SGDP using a pangenome and DeepVariant
3 months ago by DBScan ▴ 300
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500
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Comment: Comment: PCA from plink2 for SGDP using a pangenome and DeepVariant
3 months ago by DBScan ▴ 300
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500
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Comment: Comment: PCA from plink2 for SGDP using a pangenome and DeepVariant
3 months ago by DBScan ▴ 300
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715
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Comment: Comment: difference betwween hail and plink
3 months ago by DBScan ▴ 300
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618
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Comment: Comment: PCA plot interpretation (single population)
3 months ago by DBScan ▴ 300
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521
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Comment: Comment: Normal number of variants to lose during liftover: GRCh38 to hg19
3 months ago by DBScan ▴ 300
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733
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Comment: Comment: Problem with DRAGEN RNAseq hashtable directory
3 months ago by DBScan ▴ 300
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745
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Comment: Comment: GIAB Benchmarking
4 months ago by DBScan ▴ 300
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660
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Comment: Comment: Calculating number of SNPs in linkage disequilibrium at different thresholds fro
4 months ago by DBScan ▴ 300
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459
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Comment: Comment: GATK version check failed
4 months ago by DBScan ▴ 300
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964
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Comment: Comment: Problem in installing 'magick' R package
5 months ago by DBScan ▴ 300
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627
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Comment: Comment: Saving the output of LD pruning from SNPRelate package as a new GDS file
7 months ago by DBScan ▴ 300
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2
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1.2k
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Comment: Comment: T2T fixed GRCg38 gaps and issues, gaps genomic coordinates.
8 months ago by DBScan ▴ 300
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1.2k
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Comment: Comment: T2T fixed GRCg38 gaps and issues, gaps genomic coordinates.
8 months ago by DBScan ▴ 300
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772
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Comment: Comment: bcftools view to failed reader data
9 months ago by DBScan ▴ 300
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3.2k
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Comment: Comment: Conda/Mamba environment activation error
9 months ago by DBScan ▴ 300
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1.1k
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Comment: Comment: Qualimap multi-bamqc input file
10 months ago by DBScan ▴ 300
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1.1k
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Comment: Comment: Qualimap multi-bamqc input file
10 months ago by DBScan ▴ 300
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709
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Comment: Comment: whole genome sequencing and assembly
10 months ago by DBScan ▴ 300
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709
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Comment: Comment: whole genome sequencing and assembly
10 months ago by DBScan ▴ 300
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733
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Comment: Comment: Deepvariant and input CRAM files
10 months ago by DBScan ▴ 300
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1
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789
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Comment: Comment: Launched: Genozip 15 with co-compression of BAM and FASTQ
10 months ago by DBScan ▴ 300
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831
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Comment: Comment: Snakemake cyclic dependency for gather operations
2.3 years ago by DBScan ▴ 300
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2.6k
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Comment: Comment: vcf file summary
2.8 years ago by DBScan ▴ 300
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1.3k
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Comment: C: ChIPQC error when running example from documentation
3.6 years ago by DBScan ▴ 300
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1.0k
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Comment: C: Calculating pathway activity from TCGA RPPA data
3.8 years ago by DBScan ▴ 300
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2.5k
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Comment: C: awk column number is a variable
updated 3.8 years ago by 161k • written 3.8 years ago by ▴ 300
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