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Comment: Which language use as a beginner in Bioinformatics and Computational genomics
23 months ago by
rpolicastro
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1.1k
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Comment:
Comment: sequencing data from different samples in the Integrative Genome Viewer (IGV)
23 months ago by
rpolicastro
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1.9k
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Comment:
Comment: scRNA-seq: Consistent low number of cells and low fraction reads across the samp
23 months ago by
rpolicastro
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2.2k
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Comment: Tools or R / Python packages to perfom ML models
23 months ago by
rpolicastro
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2
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1.9k
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Comment:
Comment: scRNA-seq: Consistent low number of cells and low fraction reads across the samp
23 months ago by
rpolicastro
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Comment: Making multiple box plots with relative abundance in R
23 months ago by
rpolicastro
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1.4k
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Answer:
Answer: Making multiple box plots with relative abundance in R
23 months ago by
rpolicastro
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2
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1.2k
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Answer:
Answer: How to create a mutation frequency comparison plot?
23 months ago by
rpolicastro
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2
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1.4k
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Answer:
Answer: How to get unaligned reads and aligned reads into separate files from SAM/BAM?
23 months ago by
rpolicastro
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1.7k
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Comment:
Comment: Using ggplot2 to make barplots of RNASeq data - maintaining sample metadata when
23 months ago by
rpolicastro
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1.2k
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Comment: Extracting list of identical items from several excel files
23 months ago by
rpolicastro
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4.1k
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Comment:
Comment: WGCNA Analysis - blockwiseModules data processing
23 months ago by
rpolicastro
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1.8k
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Answer:
Answer: featureCount Error "No paired-end reads were detected in paired-end read library
23 months ago by
rpolicastro
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1.3k
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Comment:
Comment: How to change "CompressedGRangesList" to "GRangesList"
23 months ago by
rpolicastro
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1.2k
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Comment: ComBat-seq problem
23 months ago by
rpolicastro
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1.2k
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Comment:
Comment: STAR GeneCounts for most genes are 0
23 months ago by
rpolicastro
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1.1k
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Comment:
Comment: featureCounts error???
23 months ago by
rpolicastro
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2
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1.5k
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Answer:
Answer: Samtools index not working in Snakemake
23 months ago by
rpolicastro
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1.9k
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Comment:
Comment: duplicates issues when trying to convert long to wide in R
24 months ago by
rpolicastro
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1.9k
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Comment:
Comment: duplicates issues when trying to convert long to wide in R
24 months ago by
rpolicastro
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865
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Comment:
Comment: How to make an amino acid sequence using `AAString ()`?
24 months ago by
rpolicastro
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1.2k
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Comment:
Comment: RNA-Seq data analysis - question
24 months ago by
rpolicastro
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3
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2.6k
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Answer:
Answer: running for loop for resolution of seurat got error: Error: Not an S4 object.
24 months ago by
rpolicastro
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1.1k
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Comment:
Comment: Differential Gene Expression between patients and not groups
24 months ago by
rpolicastro
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1.4k
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Comment: R package version
24 months ago by
rpolicastro
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1.1k
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Comment: Differential Gene Expression between patients and not groups
24 months ago by
rpolicastro
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1.5k
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Comment:
Comment: Bulk RNAseq Salmon index building which transcriptome to use
24 months ago by
rpolicastro
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1.4k
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Comment:
Comment: all(rownames(cts) %in% txdf$TXNAME) is FALSE in DTU Analysis in R
24 months ago by
rpolicastro
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1
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0
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2.1k
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Comment:
Comment: question regarding the labeling of points on graphs generated by ggplot in R
24 months ago by
rpolicastro
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1
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0
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3.8k
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Answer:
Answer: Create Seurat Object from matrix and two text files
24 months ago by
rpolicastro
13k
1
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2
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2.1k
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Comment:
Comment: question regarding the labeling of points on graphs generated by ggplot in R
24 months ago by
rpolicastro
13k
1
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1
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2.1k
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Comment:
Comment: question regarding the labeling of points on graphs generated by ggplot in R
24 months ago by
rpolicastro
13k
0
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1
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3.8k
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Comment:
Comment: Create Seurat Object from matrix and two text files
24 months ago by
rpolicastro
13k
2
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1.4k
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Answer:
Answer: all(rownames(cts) %in% txdf$TXNAME) is FALSE in DTU Analysis in R
24 months ago by
rpolicastro
13k
1
vote
3
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2.1k
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Comment:
Comment: question regarding the labeling of points on graphs generated by ggplot in R
24 months ago by
rpolicastro
13k
1
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0
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1.3k
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Comment:
Comment: HT-Seq and count matrix
24 months ago by
rpolicastro
13k
2
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1
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1.3k
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Answer:
Answer: HT-Seq and count matrix
24 months ago by
rpolicastro
13k
0
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1
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4.1k
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Comment:
Comment: Get errors in loading packages/ calling functions in sc-seq data analysis
24 months ago by
rpolicastro
13k
0
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1
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883
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Comment:
Comment: How to find transcription factor in my gene set
24 months ago by
rpolicastro
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1
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1.5k
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Comment:
Comment: Need help ASAP
24 months ago by
rpolicastro
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0
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1
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2.1k
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Comment:
Comment: Samtools filtering based on PNEXT
24 months ago by
rpolicastro
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0
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1.5k
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Comment:
Comment: Need help ASAP
24 months ago by
rpolicastro
13k
2
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1.3k
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Answer:
Answer: Printing quality scores from fastq file
24 months ago by
rpolicastro
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0
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0
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2.5k
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Comment:
Comment: GSVA Analysis
24 months ago by
rpolicastro
13k
1
vote
1
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1.6k
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Comment:
Comment: FASTA File Concatenation
2.0 years ago by
rpolicastro
13k
3
votes
2
replies
2.5k
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Answer:
Answer: GSVA Analysis
2.0 years ago by
rpolicastro
13k
0
votes
1
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1.9k
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Comment:
Comment: Use mutate inside for loop and write the results
2.0 years ago by
rpolicastro
13k
0
votes
0
replies
1.7k
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Answer:
Answer: QC cut off for snRNAseq data
2.0 years ago by
rpolicastro
13k
4
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1
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1.7k
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Answer:
Answer: Unable to install Kmergenie
2.0 years ago by
rpolicastro
13k
1
vote
1
reply
1.7k
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Comment:
Comment: Unable to install Kmergenie
2.0 years ago by
rpolicastro
13k
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