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Comment: Comment: RSEM implementation
11 months ago by rpolicastro 13k
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643
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Answer: Answer: What is the best integration package for large single cell RNA sequencing datase
11 months ago by rpolicastro 13k
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887
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Answer: Answer: Rename GFF3 File
11 months ago by rpolicastro 13k
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1.1k
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Comment: Comment: How to get information about promoter from bulk-RNAseq?
11 months ago by rpolicastro 13k
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494
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Answer: Answer: Is RNA-Seq well suited for studying pseudogenes and lncRNA?
11 months ago by rpolicastro 13k
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2.6k
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Comment: Comment: How to calculate TPM from featureCounts output
11 months ago by rpolicastro 13k
2
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1
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2.6k
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Answer: Answer: How to calculate TPM from featureCounts output
11 months ago by rpolicastro 13k
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0
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1.3k
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Answer: Answer: what is the difference between FindVariableFeatures and FindAllMarkers?
12 months ago by rpolicastro 13k
6
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1.2k
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Answer: Answer: how to sort a fasta file
12 months ago by rpolicastro 13k
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0
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798
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Comment: Comment: Ambient RNA expression correction
12 months ago by rpolicastro 13k
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0
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713
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Answer: Answer: sctransform on scRNA seq
12 months ago by rpolicastro 13k
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1
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1.4k
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Answer: Answer: Dot Plot using KEGG
12 months ago by rpolicastro 13k
1
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1
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686
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Answer: Answer: Concatenating text files based on common indices
12 months ago by rpolicastro 13k
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1
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710
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Comment: Comment: About inconsistent cell counts per samples obtained in small nuclear RNAseq data
12 months ago by rpolicastro 13k
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2
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2.8k
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Answer: Answer: INSTALLING DEseq2 via conda
12 months ago by rpolicastro 13k
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1
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751
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Answer: Answer: Removing four columns with the same name and position from 38 data.frames in R
12 months ago by rpolicastro 13k
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1.1k
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Comment: Comment: Subset FASTA file using partial matching of headers with list of taxon names
12 months ago by rpolicastro 13k
2
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0
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437
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Answer: Answer: emptyDrops generates different results
12 months ago by rpolicastro 13k
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0
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605
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Answer: Answer: What is the best aligner for stranded RNASeq
12 months ago by rpolicastro 13k
3
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1
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868
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Answer: Answer: Problematic experimental design RNA-Seq
12 months ago by rpolicastro 13k
1
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0
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3.1k
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Comment: Comment: Gene read count-level batch correction in scRNA-seq?
13 months ago by rpolicastro 13k
0
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1
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1.6k
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Comment: Comment: Transformation of Log2FC to average logFC
13 months ago by rpolicastro 13k
0
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1
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3.1k
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Comment: Comment: Gene read count-level batch correction in scRNA-seq?
13 months ago by rpolicastro 13k
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0
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824
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Comment: Comment: SCT transform
13 months ago by rpolicastro 13k
1
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1
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2.5k
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Answer: Answer: Error in `dplyr::mutate()`
13 months ago by rpolicastro 13k
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1
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913
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Comment: Comment: SVA will just determine the batch covariates that [may] exist in your data, pl.
13 months ago by rpolicastro 13k
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1
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1.1k
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Comment: Comment: Combining data from single- and paired-end sequencing done on same samples
13 months ago by rpolicastro 13k
0
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1
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774
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Comment: Comment: p-fold plot
13 months ago by rpolicastro 13k
3
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1
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774
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Answer: Answer: p-fold plot
13 months ago by rpolicastro 13k
0
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1
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755
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Answer: Answer: scRNA seq integration
13 months ago by rpolicastro 13k
0
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1
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639
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Answer: Answer: scRNA-seq cell type mapping neuron VS glia proportion
13 months ago by rpolicastro 13k
2
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0
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656
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Answer: Answer: Changing a fasta header
13 months ago by rpolicastro 13k
0
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1
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669
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Comment: Comment: what is the reason of fastqc software different in QC% in fastq1 fastq2
13 months ago by rpolicastro 13k
0
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0
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602
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Answer: Answer: Count Matrix normalisation for downstream analysis and for creating heatmap of t
13 months ago by rpolicastro 13k
1
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1
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1.0k
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Comment: Comment: Help with samtools
13 months ago by rpolicastro 13k
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1
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551
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Comment: Comment: Basic BED file not compatible with CNVkit batch
13 months ago by rpolicastro 13k
0
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1
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1.9k
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Comment: Comment: Sorting (big) FASTQ file
13 months ago by rpolicastro 13k
0
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0
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718
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Answer: Answer: Cigar String really high N
13 months ago by rpolicastro 13k
3
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1
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1.1k
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Answer: Answer: Combining data from single- and paired-end sequencing done on same samples
13 months ago by rpolicastro 13k
3
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2
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1.0k
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Comment: Comment: Biological replicates
13 months ago by rpolicastro 13k
0
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1
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898
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Comment: Comment: Query in indexing human genome
13 months ago by rpolicastro 13k
0
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1
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545
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Comment: Comment: single cell RNA analysis
13 months ago by rpolicastro 13k
0
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0
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856
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Comment: Comment: Modify fasta file header
13 months ago by rpolicastro 13k
0
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1
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2.3k
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Comment: Comment: kallisto bootstrap / condo installation problem
13 months ago by rpolicastro 13k
0
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1
reply
2.3k
views
Comment: Comment: kallisto bootstrap / condo installation problem
13 months ago by rpolicastro 13k
1
vote
0
replies
856
views
Answer: Answer: Modify fasta file header
13 months ago by rpolicastro 13k
0
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1
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2.3k
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Comment: Comment: kallisto bootstrap / condo installation problem
13 months ago by rpolicastro 13k
2
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0
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1.7k
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Answer: Answer: How to install VEP plugins in conda environment
13 months ago by rpolicastro 13k
0
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1
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592
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Comment: Comment: How combine geom-point with geom-line?
13 months ago by rpolicastro 13k
1
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0
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1.7k
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Answer: Answer: A large portion of gene ID cannot be mapped when running the "bitr" command of t
13 months ago by rpolicastro 13k
1,383 results • Page 3 of 28
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