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Comment: Comment: RSEM implementation
2.4 years ago by rpolicastro 13k
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Answer: Answer: What is the best integration package for large single cell RNA sequencing datase
2.4 years ago by rpolicastro 13k
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Answer: Answer: Rename GFF3 File
2.4 years ago by rpolicastro 13k
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Comment: Comment: How to get information about promoter from bulk-RNAseq?
2.4 years ago by rpolicastro 13k
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Answer: Answer: Is RNA-Seq well suited for studying pseudogenes and lncRNA?
2.4 years ago by rpolicastro 13k
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4.4k
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Comment: Comment: How to calculate TPM from featureCounts output
2.4 years ago by rpolicastro 13k
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4.4k
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Answer: Answer: How to calculate TPM from featureCounts output
2.4 years ago by rpolicastro 13k
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3.0k
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Answer: Answer: what is the difference between FindVariableFeatures and FindAllMarkers?
2.4 years ago by rpolicastro 13k
6
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3.2k
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Answer: Answer: how to sort a fasta file
2.4 years ago by rpolicastro 13k
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1.6k
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Comment: Comment: Ambient RNA expression correction
2.4 years ago by rpolicastro 13k
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1.3k
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Answer: Answer: sctransform on scRNA seq
2.4 years ago by rpolicastro 13k
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3.2k
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Answer: Answer: Dot Plot using KEGG
2.4 years ago by rpolicastro 13k
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1.4k
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Answer: Answer: Concatenating text files based on common indices
2.4 years ago by rpolicastro 13k
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1.2k
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Comment: Comment: About inconsistent cell counts per samples obtained in small nuclear RNAseq data
2.4 years ago by rpolicastro 13k
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5.9k
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Answer: Answer: INSTALLING DEseq2 via conda
2.4 years ago by rpolicastro 13k
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1.6k
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Answer: Answer: Removing four columns with the same name and position from 38 data.frames in R
2.4 years ago by rpolicastro 13k
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2.2k
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Comment: Comment: Subset FASTA file using partial matching of headers with list of taxon names
2.4 years ago by rpolicastro 13k
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715
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Answer: Answer: emptyDrops generates different results
2.5 years ago by rpolicastro 13k
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1.2k
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Answer: Answer: What is the best aligner for stranded RNASeq
2.5 years ago by rpolicastro 13k
3
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1
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1.6k
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Answer: Answer: Problematic experimental design RNA-Seq
2.5 years ago by rpolicastro 13k
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5.0k
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Comment: Comment: Gene read count-level batch correction in scRNA-seq?
2.5 years ago by rpolicastro 13k
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3.7k
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Comment: Comment: Transformation of Log2FC to average logFC
2.5 years ago by rpolicastro 13k
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5.0k
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Comment: Comment: Gene read count-level batch correction in scRNA-seq?
2.5 years ago by rpolicastro 13k
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1.4k
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Comment: Comment: SCT transform
2.5 years ago by rpolicastro 13k
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1
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6.2k
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Answer: Answer: Error in `dplyr::mutate()`
2.5 years ago by rpolicastro 13k
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1
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1.4k
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Comment: Comment: SVA will just determine the batch covariates that [may] exist in your data, pl.
2.5 years ago by rpolicastro 13k
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2.0k
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Comment: Comment: Combining data from single- and paired-end sequencing done on same samples
2.5 years ago by rpolicastro 13k
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1
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1.4k
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Comment: Comment: p-fold plot
2.5 years ago by rpolicastro 13k
3
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1.4k
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Answer: Answer: p-fold plot
2.5 years ago by rpolicastro 13k
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1
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1.4k
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Answer: Answer: scRNA seq integration
2.5 years ago by rpolicastro 13k
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1
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1.2k
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Answer: Answer: scRNA-seq cell type mapping neuron VS glia proportion
2.5 years ago by rpolicastro 13k
2
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1.2k
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Answer: Answer: Changing a fasta header
2.5 years ago by rpolicastro 13k
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1
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1.0k
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Comment: Comment: what is the reason of fastqc software different in QC% in fastq1 fastq2
2.5 years ago by rpolicastro 13k
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0
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1.1k
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Answer: Answer: Count Matrix normalisation for downstream analysis and for creating heatmap of t
2.5 years ago by rpolicastro 13k
1
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1
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1.8k
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Comment: Comment: Help with samtools
2.5 years ago by rpolicastro 13k
0
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1
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953
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Comment: Comment: Basic BED file not compatible with CNVkit batch
2.5 years ago by rpolicastro 13k
0
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1
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3.8k
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Comment: Comment: Sorting (big) FASTQ file
2.5 years ago by rpolicastro 13k
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0
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1.3k
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Answer: Answer: Cigar String really high N
2.5 years ago by rpolicastro 13k
3
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1
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2.0k
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Answer: Answer: Combining data from single- and paired-end sequencing done on same samples
2.5 years ago by rpolicastro 13k
3
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2
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2.1k
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Comment: Comment: Biological replicates
2.5 years ago by rpolicastro 13k
0
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1
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1.4k
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Comment: Comment: Query in indexing human genome
2.5 years ago by rpolicastro 13k
0
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1
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933
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Comment: Comment: single cell RNA analysis
2.5 years ago by rpolicastro 13k
0
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0
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1.6k
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Comment: Comment: Modify fasta file header
2.5 years ago by rpolicastro 13k
0
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1
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3.7k
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Comment: Comment: kallisto bootstrap / condo installation problem
2.5 years ago by rpolicastro 13k
0
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1
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3.7k
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Comment: Comment: kallisto bootstrap / condo installation problem
2.5 years ago by rpolicastro 13k
1
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0
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1.6k
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Answer: Answer: Modify fasta file header
2.5 years ago by rpolicastro 13k
0
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1
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3.7k
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Comment: Comment: kallisto bootstrap / condo installation problem
2.5 years ago by rpolicastro 13k
2
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0
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3.0k
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Answer: Answer: How to install VEP plugins in conda environment
2.5 years ago by rpolicastro 13k
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1
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1.1k
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Comment: Comment: How combine geom-point with geom-line?
2.5 years ago by rpolicastro 13k
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0
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4.0k
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Answer: Answer: A large portion of gene ID cannot be mapped when running the "bitr" command of t
2.5 years ago by rpolicastro 13k
1,382 results • Page 3 of 28
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