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Comment: Comment: Which language use as a beginner in Bioinformatics and Computational genomics
5 months ago by rpolicastro 13k
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407
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Comment: Comment: sequencing data from different samples in the Integrative Genome Viewer (IGV)
5 months ago by rpolicastro 13k
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857
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Comment: Comment: scRNA-seq: Consistent low number of cells and low fraction reads across the samp
5 months ago by rpolicastro 13k
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950
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Comment: Comment: Tools or R / Python packages to perfom ML models
5 months ago by rpolicastro 13k
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857
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Comment: Comment: scRNA-seq: Consistent low number of cells and low fraction reads across the samp
5 months ago by rpolicastro 13k
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541
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Comment: Comment: Making multiple box plots with relative abundance in R
5 months ago by rpolicastro 13k
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541
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Answer: Answer: Making multiple box plots with relative abundance in R
5 months ago by rpolicastro 13k
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519
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Answer: Answer: How to create a mutation frequency comparison plot?
5 months ago by rpolicastro 13k
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484
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Answer: Answer: How to get unaligned reads and aligned reads into separate files from SAM/BAM?
5 months ago by rpolicastro 13k
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1.1k
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Comment: Comment: Using ggplot2 to make barplots of RNASeq data - maintaining sample metadata when
5 months ago by rpolicastro 13k
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582
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Comment: Comment: Extracting list of identical items from several excel files
5 months ago by rpolicastro 13k
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1.3k
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Comment: Comment: WGCNA Analysis - blockwiseModules data processing
5 months ago by rpolicastro 13k
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607
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Answer: Answer: featureCount Error "No paired-end reads were detected in paired-end read library
5 months ago by rpolicastro 13k
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496
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Comment: Comment: How to change "CompressedGRangesList" to "GRangesList"
5 months ago by rpolicastro 13k
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480
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Comment: Comment: ComBat-seq problem
5 months ago by rpolicastro 13k
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498
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Comment: Comment: STAR GeneCounts for most genes are 0
5 months ago by rpolicastro 13k
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529
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Comment: Comment: featureCounts error???
5 months ago by rpolicastro 13k
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1
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801
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Answer: Answer: Samtools index not working in Snakemake
6 months ago by rpolicastro 13k
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896
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Comment: Comment: duplicates issues when trying to convert long to wide in R
6 months ago by rpolicastro 13k
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896
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Comment: Comment: duplicates issues when trying to convert long to wide in R
6 months ago by rpolicastro 13k
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404
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Comment: Comment: How to make an amino acid sequence using `AAString ()`?
6 months ago by rpolicastro 13k
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635
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Comment: Comment: RNA-Seq data analysis - question
6 months ago by rpolicastro 13k
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779
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Answer: Answer: running for loop for resolution of seurat got error: Error: Not an S4 object.
6 months ago by rpolicastro 13k
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551
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Comment: Comment: Differential Gene Expression between patients and not groups
6 months ago by rpolicastro 13k
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1
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627
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Comment: Comment: R package version
6 months ago by rpolicastro 13k
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551
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Comment: Comment: Differential Gene Expression between patients and not groups
6 months ago by rpolicastro 13k
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1
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689
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Comment: Comment: Bulk RNAseq Salmon index building which transcriptome to use
6 months ago by rpolicastro 13k
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652
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Comment: Comment: all(rownames(cts) %in% txdf$TXNAME) is FALSE in DTU Analysis in R
6 months ago by rpolicastro 13k
1
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0
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951
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Comment: Comment: question regarding the labeling of points on graphs generated by ggplot in R
6 months ago by rpolicastro 13k
1
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0
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845
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Answer: Answer: Create Seurat Object from matrix and two text files
6 months ago by rpolicastro 13k
1
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2
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951
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Comment: Comment: question regarding the labeling of points on graphs generated by ggplot in R
6 months ago by rpolicastro 13k
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1
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951
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Comment: Comment: question regarding the labeling of points on graphs generated by ggplot in R
6 months ago by rpolicastro 13k
0
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1
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845
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Comment: Comment: Create Seurat Object from matrix and two text files
6 months ago by rpolicastro 13k
2
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1
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652
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Answer: Answer: all(rownames(cts) %in% txdf$TXNAME) is FALSE in DTU Analysis in R
6 months ago by rpolicastro 13k
1
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3
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951
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Comment: Comment: question regarding the labeling of points on graphs generated by ggplot in R
6 months ago by rpolicastro 13k
1
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0
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592
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Comment: Comment: HT-Seq and count matrix
6 months ago by rpolicastro 13k
2
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1
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592
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Answer: Answer: HT-Seq and count matrix
6 months ago by rpolicastro 13k
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1.2k
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Comment: Comment: Get errors in loading packages/ calling functions in sc-seq data analysis
6 months ago by rpolicastro 13k
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1
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446
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Comment: Comment: How to find transcription factor in my gene set
6 months ago by rpolicastro 13k
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1
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833
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Comment: Comment: Need help ASAP
6 months ago by rpolicastro 13k
0
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1
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913
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Comment: Comment: Samtools filtering based on PNEXT
6 months ago by rpolicastro 13k
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0
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833
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Comment: Comment: Need help ASAP
6 months ago by rpolicastro 13k
2
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0
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579
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Answer: Answer: Printing quality scores from fastq file
6 months ago by rpolicastro 13k
0
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0
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796
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Comment: Comment: GSVA Analysis
6 months ago by rpolicastro 13k
1
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1
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760
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Comment: Comment: FASTA File Concatenation
6 months ago by rpolicastro 13k
3
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2
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796
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Answer: Answer: GSVA Analysis
6 months ago by rpolicastro 13k
0
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1
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787
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Comment: Comment: Use mutate inside for loop and write the results
6 months ago by rpolicastro 13k
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0
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406
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Answer: Answer: QC cut off for snRNAseq data
6 months ago by rpolicastro 13k
4
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1
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817
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Answer: Answer: Unable to install Kmergenie
6 months ago by rpolicastro 13k
1
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1
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817
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Comment: Comment: Unable to install Kmergenie
6 months ago by rpolicastro 13k
1,383 results • Page 2 of 28
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