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Comment: Comment: SNP annotation tool options (alternatives to ANNOVAR)
2 hours ago by Jeremy Leipzig 23k
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209
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Comment: Comment: SNP annotation tool options (alternatives to ANNOVAR)
23 hours ago by Jeremy Leipzig 23k
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36k
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Comment: Comment: List of cloud genomics companies
1 day ago by Jeremy Leipzig 23k
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267
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Answer: Answer: Idea: Cloud-based genome annotation & visualization tool — looking for feedback
1 day ago by Jeremy Leipzig 23k
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209
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Answer: Answer: SNP annotation tool options (alternatives to ANNOVAR)
1 day ago by Jeremy Leipzig 23k
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382
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Answer: Answer: Strugling on the 3'rule of HGVS
14 days ago by Jeremy Leipzig 23k
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5.9k
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Comment: Comment: What happened to biomart.org
4 weeks ago by Jeremy Leipzig 23k
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1
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2.9k
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Comment: Comment: RTG (Real Time Genomics) docker image - Problem dealing with different VCFs
8 weeks ago by Jeremy Leipzig 23k
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1
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2.9k
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Comment: Comment: RTG (Real Time Genomics) docker image - Problem dealing with different VCFs
8 weeks ago by Jeremy Leipzig 23k
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9.3k
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Comment: Comment: Resource: A searchable library of 100,000+ scientific figures for visualization
9 weeks ago by Jeremy Leipzig 23k
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584
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Comment: Comment: VCF Header malformation
3 months ago by Jeremy Leipzig 23k
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613
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Comment: Comment: lifting over mitochondrial SNPs between reference genomes
3 months ago by Jeremy Leipzig 23k
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889
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Answer: Answer: Joint Calling for Large Germline WGS Cohort
3 months ago by Jeremy Leipzig 23k
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761
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Answer: Answer: Example of ClinVar pathogenic variant where the reference allele is pathogenic?
4 months ago by Jeremy Leipzig 23k
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554
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Comment: Comment: how to use filter_vep to filter vcf file
4 months ago by Jeremy Leipzig 23k
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635
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Comment: Comment: How important are allele fractions when calling variants?
5 months ago by Jeremy Leipzig 23k
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1
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2.7k
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Comment: Comment: Bioinformatics Docker Images Project (https://pegi3s.github.io/dockerfiles/)
6 months ago by Jeremy Leipzig 23k
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1.1k
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Comment: Comment: Depth in Cram file does not match depth in VCF file
7 months ago by Jeremy Leipzig 23k
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1
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768
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Comment: Comment: Inconsistency between VCF and HGVS
7 months ago by Jeremy Leipzig 23k
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2.4k
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Comment: Comment: Reproducibility Crisis
7 months ago by Jeremy Leipzig 23k
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918
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Answer: Answer: VEP won't show symbols for all variants; SnpEff will, but won't for others
7 months ago by Jeremy Leipzig 23k
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890
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Comment: Comment: Seeking Help for Reanalysis of Raw WES Data
7 months ago by Jeremy Leipzig 23k
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694
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Comment: Comment: How to compute DS (diploid dosage) from HDS (haploid dosage) in VCF?
7 months ago by Jeremy Leipzig 23k
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3.3k
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Comment: Comment: How are probabilities of insertions and deletions encoded in FASTQ?
8 months ago by Jeremy Leipzig 23k
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3.8k
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Comment: Comment: How to display a VCF/BCF file or stream as a paginated table in a python web fra
8 months ago by Jeremy Leipzig 23k
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654
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Comment: Comment: Short Survey on Genomic Data Management & Analysis Workflows
8 months ago by Jeremy Leipzig 23k
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0
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571
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Comment: Comment: Seafood Genomics course - Online, February 25-28
8 months ago by Jeremy Leipzig 23k
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2
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909
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Answer: Answer: Split genotypes in VCF file
8 months ago by Jeremy Leipzig 23k
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0
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986
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Comment: Comment: Vcf Filtering
9 months ago by Jeremy Leipzig 23k
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1
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1.4k
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Answer: Answer: Extracting Variant Sequences from 1000 Genomes VCF File and Mapping to Canonical
9 months ago by Jeremy Leipzig 23k
4
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1
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944
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Answer: Answer: How to Resolve Reference Mismatch While Extracting Gene Variants from 1000 Genom
9 months ago by Jeremy Leipzig 23k
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0
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1.4k
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Comment: Comment: Extracting Variant Sequences from 1000 Genomes VCF File and Mapping to Canonical
9 months ago by Jeremy Leipzig 23k
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0
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1.9k
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Comment: Comment: Non Variant Sites in GVCF File
10 months ago by Jeremy Leipzig 23k
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1
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1.9k
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Answer: Answer: Non Variant Sites in GVCF File
10 months ago by Jeremy Leipzig 23k
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0
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902
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Answer: Answer: Does TCGA data only use host reads to make pre-processed data (CNV, Mutations st
10 months ago by Jeremy Leipzig 23k
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0
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1.9k
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Comment: Comment: Blast with variable number of Ns
10 months ago by Jeremy Leipzig 23k
1
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0
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740
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Comment: Comment: Regarding ClinVar's VCF file
10 months ago by Jeremy Leipzig 23k
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0
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1.3k
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Comment: Comment: English terms distinguishing genotype allelic nucleotides (T/C) from VCF encoded
10 months ago by Jeremy Leipzig 23k
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0
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1.3k
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Comment: Comment: English terms distinguishing genotype allelic nucleotides (T/C) from VCF encoded
10 months ago by Jeremy Leipzig 23k
0
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1
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1.3k
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Comment: Comment: English terms distinguishing genotype allelic nucleotides (T/C) from VCF encoded
10 months ago by Jeremy Leipzig 23k
1
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6
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1.3k
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English terms distinguishing genotype allelic nucleotides (T/C) from VCF encoded genotype (0/1)
genotypes vcf
10 months ago by Jeremy Leipzig 23k
0
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1
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2.3k
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Answer: Answer: Ensembl vep GRCh38 cache version
10 months ago by Jeremy Leipzig 23k
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0
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1.2k
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Comment: Comment: Can I combine variants called using T2T-CHM13 with GRCh38?
11 months ago by Jeremy Leipzig 23k
2
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0
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1.2k
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Answer: Answer: Getting gnomAD allele frequencies for checking against populations
11 months ago by Jeremy Leipzig 23k
1
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1
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1.3k
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Comment: Comment: Experienced Bioinformatician Seeking Opportunities in NGS Data Analysis and Pipe
11 months ago by Jeremy Leipzig 23k
1
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1
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950
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Comment: Comment: A notebook for checking relatedness and X heterozygosity from sequencing data
11 months ago by Jeremy Leipzig 23k
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1
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1.5k
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Comment: Comment: Any Paper: Ultra-fast QA and literature search based on Pubmed papers.
11 months ago by Jeremy Leipzig 23k
1
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6
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1.8k
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What is a genomic range that would almost always get decent WGS coverage but is never covered by WES?
wes wgs
updated 12 months ago by 22k • written 12 months ago by 23k
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1.8k
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Comment: Comment: What is a genomic range that would almost always get decent WGS coverage but is
12 months ago by Jeremy Leipzig 23k
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0
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1.8k
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Comment: Comment: What is a genomic range that would almost always get decent WGS coverage but is
12 months ago by Jeremy Leipzig 23k
1,416 results • Page 1 of 29
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