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Comment: Comment: Error when trying to make MetaXcan run through Snakemake
3.4 years ago by Jeremy Leipzig 23k
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1.4k
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Answer: Answer: Error when trying to make MetaXcan run through Snakemake
3.4 years ago by Jeremy Leipzig 23k
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3.3k
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Comment: Comment: fastp snakemake
3.5 years ago by Jeremy Leipzig 23k
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1.8k
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Comment: Comment: How to estimate race/ethnicity from VCF?
3.5 years ago by Jeremy Leipzig 23k
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1.5k
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Answer: Answer: huge difference when comparing 2 vcf files from the same sample
3.5 years ago by Jeremy Leipzig 23k
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2.0k
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Comment: Comment: slurm configuration for cromwell server
3.5 years ago by Jeremy Leipzig 23k
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887
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Answer: Answer: How to download NGS-based raw data from GTEx database
3.6 years ago by Jeremy Leipzig 23k
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1.9k
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Comment: Comment: How to test for gender bias in RNA seq experiment ?
3.6 years ago by Jeremy Leipzig 23k
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2.7k
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Comment: Comment: bioinformatics pipelines on GCP or AWS
3.6 years ago by Jeremy Leipzig 23k
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6.2k
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Comment: Comment: Secrets to finding metadata on SRA data?
3.7 years ago by Jeremy Leipzig 23k
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6.2k
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Comment: Comment: Secrets to finding metadata on SRA data?
3.7 years ago by Jeremy Leipzig 23k
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1.6k
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Comment: Comment: Why don't we align to pre-RNA for typical single-cell RNA-seq data? (CellRanger
3.7 years ago by Jeremy Leipzig 23k
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2.6k
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Comment: Comment: Error in executing STAR Aligner
3.7 years ago by Jeremy Leipzig 23k
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2.6k
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Comment: Comment: Error in executing STAR Aligner
3.7 years ago by Jeremy Leipzig 23k
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1
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2.6k
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Answer: Answer: Error in executing STAR Aligner
3.7 years ago by Jeremy Leipzig 23k
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2.3k
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Answer: Answer: Trimmomatic seems not working
3.7 years ago by Jeremy Leipzig 23k
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1
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956
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Comment: Comment: does bioconductor/bioconductor_docker:RELEASE_X_Y install CRAN packages from a f
3.7 years ago by Jeremy Leipzig 23k
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Comment: Comment: How Much Does It Cost To Align A Flowcell In The Cloud?
3.7 years ago by Jeremy Leipzig 23k
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939
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Answer: Answer: Variant calling
3.8 years ago by Jeremy Leipzig 23k
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1
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1.7k
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Comment: Comment: mirBase data to write a script to understand which is the dominant arm of a mirn
3.8 years ago by Jeremy Leipzig 23k
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2.5k
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Comment: Comment: What are the pain points of using Genomics on the cloud today?
3.8 years ago by Jeremy Leipzig 23k
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1
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1.7k
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Comment: Comment: mirBase data to write a script to understand which is the dominant arm of a mirn
3.8 years ago by Jeremy Leipzig 23k
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1
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1.4k
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Answer: Answer: The Biostar Herald for Monday, January 24, 2022
3.8 years ago by Jeremy Leipzig 23k
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1
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2.5k
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Comment: Comment: Why there are symmetric splice junctions on IGV?
3.8 years ago by Jeremy Leipzig 23k
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2.5k
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Comment: Comment: Why there are symmetric splice junctions on IGV?
3.8 years ago by Jeremy Leipzig 23k
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896
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Answer: Answer: Does software significantly impact fold change values?
3.8 years ago by Jeremy Leipzig 23k
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6.4k
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Comment: Comment: Is it possible to pass command line arguments to python script in snakemake?
3.8 years ago by Jeremy Leipzig 23k
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6.4k
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Comment: Comment: Is it possible to pass command line arguments to python script in snakemake?
3.8 years ago by Jeremy Leipzig 23k
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1
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6.4k
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Comment: Comment: Is it possible to pass command line arguments to python script in snakemake?
3.8 years ago by Jeremy Leipzig 23k
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1
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2.1k
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Comment: Comment: Snakemake issue
3.8 years ago by Jeremy Leipzig 23k
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0
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1.1k
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Answer: Answer: The Biostar Herald for Monday, January 03, 2022
3.8 years ago by Jeremy Leipzig 23k
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1
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3.2k
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Comment: Comment: Combining GTEx and TCGA data
3.9 years ago by Jeremy Leipzig 23k
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4.3k
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Comment: Comment: Percent identity in Blast
3.9 years ago by Jeremy Leipzig 23k
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3.2k
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Comment: Comment: How can NIH SRA data be more useful?
3.9 years ago by Jeremy Leipzig 23k
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3.2k
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Answer: Answer: How can NIH SRA data be more useful?
3.9 years ago by Jeremy Leipzig 23k
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2.7k
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Comment: Comment: Why isn't it a common practice to call variant for every position in human genom
3.9 years ago by Jeremy Leipzig 23k
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2.0k
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Answer: Answer: QC with RNA-SeQC output weird
3.9 years ago by Jeremy Leipzig 23k
3
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0
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2.7k
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Answer: Answer: Why isn't it a common practice to call variant for every position in human genom
3.9 years ago by Jeremy Leipzig 23k
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1
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3.1k
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Comment: Comment: Dragen-gatk for trio
3.9 years ago by Jeremy Leipzig 23k
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3.4k
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Comment: Comment: Why all those reads in bam files were unmapped?
3.9 years ago by Jeremy Leipzig 23k
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0
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1.2k
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Answer: Answer: Merging genotyping array VCFs and then running kinship analysis
3.9 years ago by Jeremy Leipzig 23k
1
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0
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6.1k
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Comment: Comment: multiqc could not generate results
3.9 years ago by Jeremy Leipzig 23k
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1.3k
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Answer: Answer: Snakemake restricted wildcard combinations
3.9 years ago by Jeremy Leipzig 23k
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3.0k
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Comment: Comment: How to bechmark a human dataset ? (is it needed)
3.9 years ago by Jeremy Leipzig 23k
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0
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927
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Comment: Comment: Extremely large fold change for miRNA differential expression analysis
3.9 years ago by Jeremy Leipzig 23k
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1
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1.4k
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Answer: Answer: error while annotating vcf file using snpEff
4.0 years ago by Jeremy Leipzig 23k
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1.5k
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Answer: Answer: How can I know what is a good and bad variant call?
4.0 years ago by Jeremy Leipzig 23k
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1
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2.0k
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Answer: Answer: Question for Splice variants and Alternative splicing
4.0 years ago by Jeremy Leipzig 23k
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958
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Comment: Comment: Is it correct to merge multiple gvcf from separate variant calling?
4.0 years ago by Jeremy Leipzig 23k
2
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7.6k
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Answer: Answer: Using AWS for Bioinformatics
4.0 years ago by Jeremy Leipzig 23k
1,416 results • Page 7 of 29
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