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Comment: C: STAR-HT-Seq/featureCount got much more gene expression count than RSEM did
7.3 years ago by Devon Ryan 105k
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4.9k
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Comment: C: STAR-HT-Seq/featureCount got much more gene expression count than RSEM did
7.3 years ago by Devon Ryan 105k
1
vote
1
reply
4.9k
views
Comment: C: STAR-HT-Seq/featureCount got much more gene expression count than RSEM did
7.3 years ago by Devon Ryan 105k
1
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0
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1.5k
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Comment: C: expression and methylation integration
7.3 years ago by Devon Ryan 105k
1
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0
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2.4k
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Comment: C: HISAT2 and RSEM
7.3 years ago by Devon Ryan 105k
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1.1k
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Comment: C: edgeR 2GB table
7.3 years ago by Devon Ryan 105k
1
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1.5k
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Comment: C: expression and methylation integration
7.3 years ago by Devon Ryan 105k
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1
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2.4k
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Answer: A: HISAT2 and RSEM
7.3 years ago by Devon Ryan 105k
1
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3.9k
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Comment: C: Differential expression analysis with DEseq2 : multiple groups comparison
7.3 years ago by Devon Ryan 105k
4
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1
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3.7k
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Answer: A: output differents value between samtools depth and pysam
7.3 years ago by Devon Ryan 105k
1
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0
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957
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Comment: C: Some variants have ./. genotype with no read depth info in VCF file
7.3 years ago by Devon Ryan 105k
1
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1
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3.9k
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Answer: A: Differential expression analysis with DEseq2 : multiple groups comparison
7.3 years ago by Devon Ryan 105k
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2
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39k
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Comment: C: python script error: ImportError: No module named pysam
7.3 years ago by Devon Ryan 105k
0
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0
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39k
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Comment: C: python script error: ImportError: No module named pysam
7.3 years ago by Devon Ryan 105k
1
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1
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3.5k
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Comment: C: OBITools installation error (mac OS X)
7.4 years ago by Devon Ryan 105k
6
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0
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21k
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Answer: A: why PCA for RNA-Seq but tSNE for scRNA-seq?
7.4 years ago by Devon Ryan 105k
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0
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2.3k
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Answer: A: Need help with methylation bias
7.4 years ago by Devon Ryan 105k
1
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0
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5.2k
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Comment: C: Doubt on removing duplicates on amplicon sequencing data
7.4 years ago by Devon Ryan 105k
2
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2
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5.2k
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Answer: A: Doubt on removing duplicates on amplicon sequencing data
7.4 years ago by Devon Ryan 105k
0
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0
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2.0k
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Comment: C: how to use WGCNA to predict lncRNA targets?
7.4 years ago by Devon Ryan 105k
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1
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2.0k
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Comment: C: how to use WGCNA to predict lncRNA targets?
7.4 years ago by Devon Ryan 105k
1
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1
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3.6k
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Answer: A: Removal of ERCC spike-in in RNA-Seq
7.4 years ago by Devon Ryan 105k
2
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0
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50k
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Comment: C: Snakemake vs. Nextflow: strengths and weaknesses
7.4 years ago by Devon Ryan 105k
1
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1
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1.9k
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Comment: C: Migrating pipeline from TopHat to STAR
7.4 years ago by Devon Ryan 105k
2
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1
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50k
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Comment: C: Snakemake vs. Nextflow: strengths and weaknesses
7.4 years ago by Devon Ryan 105k
1
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0
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4.4k
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Comment: C: rna seq replicates not clustering
7.4 years ago by Devon Ryan 105k
1
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1
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4.4k
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Answer: C: rna seq replicates not clustering
7.4 years ago by Devon Ryan 105k
1
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0
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1.8k
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Comment: C: nomarlizing sequencing depth when use macs2 bdgbroadpeaks
7.4 years ago by Devon Ryan 105k
2
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0
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1.2k
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Answer: A: Addressing the path in mac OX
7.4 years ago by Devon Ryan 105k
0
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0
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1.8k
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Comment: C: Question about analysis design in DeSeq2
7.4 years ago by Devon Ryan 105k
0
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1
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3.4k
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Comment: C: Only 1% of reads are used as "input reads" in STAR
7.4 years ago by Devon Ryan 105k
0
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1
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1.8k
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Comment: C: Question about analysis design in DeSeq2
7.4 years ago by Devon Ryan 105k
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0
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1.8k
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Comment: C: Should I remove zero-value from my single cell expression matrix before doing di
7.4 years ago by Devon Ryan 105k
4
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1
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3.4k
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Answer: A: FPKM values from normalized read counts
7.4 years ago by Devon Ryan 105k
1
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0
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5.0k
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Comment: C: calculate fragments depth with pysam
7.4 years ago by Devon Ryan 105k
3
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0
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2.4k
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Answer: A: How to find polyA sites from gtf/gff?
7.4 years ago by Devon Ryan 105k
2
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1
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3.9k
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Comment: C: NovaSeq data analysis
7.4 years ago by Devon Ryan 105k
0
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0
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5.2k
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Comment: C: How to fix the BAM file (SAM validation error)
7.4 years ago by Devon Ryan 105k
1
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1
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10k
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Comment: C: Cannot install NumPy using pip and import it
7.4 years ago by Devon Ryan 105k
0
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1
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10k
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Comment: C: Cannot install NumPy using pip and import it
7.4 years ago by Devon Ryan 105k
1
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1
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2.1k
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Comment: C: I don't know how to make this bioinformatic picture
7.4 years ago by Devon Ryan 105k
1
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0
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3.6k
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Comment: C: differential gene expression analysis
7.4 years ago by Devon Ryan 105k
3
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1
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4.8k
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Comment: C: ExpressionSet in the age of tidyverse
7.4 years ago by Devon Ryan 105k
1
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0
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3.6k
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Comment: C: differential gene expression analysis
7.4 years ago by Devon Ryan 105k
2
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0
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1.8k
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Comment: C: Better DE analytic tools
7.4 years ago by Devon Ryan 105k
2
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0
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3.6k
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Comment: C: Cuffdiff result does not contain gene name and gene id is also of invalid identi
7.4 years ago by Devon Ryan 105k
2
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0
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1.8k
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Comment: C: Better DE analytic tools
7.4 years ago by Devon Ryan 105k
3
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2
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2.6k
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Answer: A: Differential gene expression Analysis - sample Size
7.4 years ago by Devon Ryan 105k
1
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1
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3.6k
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Answer: A: differential gene expression analysis
7.4 years ago by Devon Ryan 105k
5
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0
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50k
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Comment: C: Snakemake vs. Nextflow: strengths and weaknesses
7.4 years ago by Devon Ryan 105k
10,053 results • Page 33 of 202
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