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Comment: C: How to do statistic test for fold change considering the expression level at the
7.4 years ago by Devon Ryan 105k
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Comment: C: How to do statistic test for fold change considering the expression level at the
7.4 years ago by Devon Ryan 105k
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Comment: C: Expected correlation between ATAC data and Chip-Seq histone marks
7.4 years ago by Devon Ryan 105k
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Comment: C: Warnings while generating STAR indices
7.4 years ago by Devon Ryan 105k
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3.9k
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Answer: A: Warnings while generating STAR indices
7.4 years ago by Devon Ryan 105k
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Comment: C: Single cell RNA-seq : cell cycle plot and stemness plot
7.4 years ago by Devon Ryan 105k
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1.6k
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Comment: C: Single cell RNA-seq : cell cycle plot and stemness plot
7.4 years ago by Devon Ryan 105k
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Comment: C: How to remove the RIN (RNA integrity number) effect for RNA-seq data?
7.4 years ago by Devon Ryan 105k
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3.2k
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Comment: C: hisat 2 indexing problem
7.4 years ago by Devon Ryan 105k
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4.2k
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Answer: A: Why DE genes are not among highly variable genes between groups
7.4 years ago by Devon Ryan 105k
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3.2k
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Answer: A: hisat 2 indexing problem
7.4 years ago by Devon Ryan 105k
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Answer: A: calculate fragments depth with pysam
7.4 years ago by Devon Ryan 105k
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1.5k
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Comment: C: More efficient way than zipping arrays for transposing a FinalReport table in Py
7.4 years ago by Devon Ryan 105k
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1.5k
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Comment: C: More efficient way than zipping arrays for transposing a FinalReport table in Py
7.4 years ago by Devon Ryan 105k
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2.3k
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Answer: A: Difference between 'intergenic' and 'ncRNA' in annotation.
7.4 years ago by Devon Ryan 105k
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3.1k
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Comment: C: How reads are considered as mapped using samtools idxstats?
7.4 years ago by Devon Ryan 105k
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1.9k
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Comment: C: Alignment Annotation mistake?
7.4 years ago by Devon Ryan 105k
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3.6k
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Comment: C: Quick question: samtool idxstats and multiple mapping
7.4 years ago by Devon Ryan 105k
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2.3k
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Comment: C: How to create a gene network
7.4 years ago by Devon Ryan 105k
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3.5k
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Answer: A: How to remove the RIN (RNA integrity number) effect for RNA-seq data?
7.4 years ago by Devon Ryan 105k
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4.0k
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Comment: C: EdgeR (TMM): Samples with outlier but still show extremely low p-value and FDR
7.4 years ago by Devon Ryan 105k
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2.1k
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Comment: C: How to compute P_value for Permutation Test?
7.4 years ago by Devon Ryan 105k
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3.3k
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Comment: C: Question chip enrichment
7.4 years ago by Devon Ryan 105k
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1
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3.1k
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Answer: A: How reads are considered as mapped using samtools idxstats?
7.4 years ago by Devon Ryan 105k
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1
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5.0k
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Comment: C: calculate fragments depth with pysam
7.4 years ago by Devon Ryan 105k
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1.6k
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Comment: C: Is it advisable to include reference genome for pan-genome anlysis when working
7.4 years ago by Devon Ryan 105k
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4.6k
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Comment: C: Using RPK counts as DESeq2 input
7.4 years ago by Devon Ryan 105k
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2.2k
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Comment: C: cuffdiff error. IT hangs
7.4 years ago by Devon Ryan 105k
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6.0k
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Comment: C: ATAC-seq : call peaks, reproducibility and differential analysis without replica
7.4 years ago by Devon Ryan 105k
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6.0k
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Answer: A: ATAC-seq : call peaks, reproducibility and differential analysis without replica
7.4 years ago by Devon Ryan 105k
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4.6k
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Comment: C: Using RPK counts as DESeq2 input
7.4 years ago by Devon Ryan 105k
3
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1
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10k
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Comment: C: too few differentially expressed genes using each of DESeq2, edgeR and Limma-voo
7.4 years ago by Devon Ryan 105k
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10k
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Comment: C: too few differentially expressed genes using each of DESeq2, edgeR and Limma-voo
7.4 years ago by Devon Ryan 105k
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3.3k
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Comment: C: Problem with MACS2 results
7.4 years ago by Devon Ryan 105k
3
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1.8k
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Answer: A: which file I can use for cufflinks from the aligner STAR
7.4 years ago by Devon Ryan 105k
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2.0k
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Comment: C: Extract, combine substring and concatenate in the beginning of the same row
7.4 years ago by Devon Ryan 105k
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2.1k
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Comment: C: Luigi Error NGS pipeline ?
7.4 years ago by Devon Ryan 105k
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2.0k
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Comment: C: Extract, combine substring and concatenate in the beginning of the same row
7.4 years ago by Devon Ryan 105k
3
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1.9k
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Answer: A: How can I deal with this publication issue?
7.4 years ago by Devon Ryan 105k
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1.6k
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Comment: C: Simulate the sequence data
7.4 years ago by Devon Ryan 105k
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1.6k
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Comment: C: Simulate the sequence data
7.4 years ago by Devon Ryan 105k
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2.0k
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Answer: A: How to classify chIP-seq reads into gene bins?
7.4 years ago by Devon Ryan 105k
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1
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1.4k
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Comment: C: RNA seq sample reads don't map
7.4 years ago by Devon Ryan 105k
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2.4k
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Comment: C: Multiple ensemble ids
7.4 years ago by Devon Ryan 105k
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2.4k
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Answer: A: Multiple ensemble ids
7.4 years ago by Devon Ryan 105k
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1
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1.4k
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Comment: C: RNA seq sample reads don't map
7.4 years ago by Devon Ryan 105k
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1.4k
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Comment: C: RNA seq sample reads don't map
7.4 years ago by Devon Ryan 105k
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1.4k
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Comment: C: RNA seq sample reads don't map
7.4 years ago by Devon Ryan 105k
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4.4k
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Comment: C: Combine the fastq files
7.4 years ago by Devon Ryan 105k
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1.7k
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Comment: C: What statistical analysis to perform on data from gene expression analysis?
7.4 years ago by Devon Ryan 105k
10,053 results • Page 34 of 202
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