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Comment: C: kallisto: strand-specific and fragment length calculation
7.5 years ago by Devon Ryan 105k
3
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Answer: A: How 2-channel sequencing chemistry (Next-Seq) distinguish "G" and 'no signal'
7.5 years ago by Devon Ryan 105k
6
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9.6k
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Answer: A: Is logFC in edgeR base e, 2, or 10?
7.5 years ago by Devon Ryan 105k
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7.1k
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Comment: C: Merging raw Illumina FASTQ files with snakemake
7.5 years ago by Devon Ryan 105k
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Answer: A: Converting BAM to Fastq - losing reads
7.5 years ago by Devon Ryan 105k
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2.0k
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Comment: C: All chromosomes for mapping?
7.5 years ago by Devon Ryan 105k
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2.0k
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Answer: A: All chromosomes for mapping?
7.5 years ago by Devon Ryan 105k
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1.7k
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Comment: C: Filtering the gene list using q-value instead if p-value
7.5 years ago by Devon Ryan 105k
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2.5k
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Answer: A: Sanger validated SNP not present in IGV despite 10X coverage at site??!!
7.5 years ago by Devon Ryan 105k
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1.7k
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Answer: A: Filtering the gene list using q-value instead if p-value
7.5 years ago by Devon Ryan 105k
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1
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4.7k
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Comment: C: Sorting my .bam with samtools produces differences in the fastq files generated
7.5 years ago by Devon Ryan 105k
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1
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4.7k
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Comment: C: Sorting my .bam with samtools produces differences in the fastq files generated
7.5 years ago by Devon Ryan 105k
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1
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4.7k
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Comment: C: Sorting my .bam with samtools produces differences in the fastq files generated
7.5 years ago by Devon Ryan 105k
5
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2
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4.7k
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Answer: A: Sorting my .bam with samtools produces differences in the fastq files generated
7.5 years ago by Devon Ryan 105k
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0
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4.7k
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Comment: C: Sorting my .bam with samtools produces differences in the fastq files generated
7.5 years ago by Devon Ryan 105k
6
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3
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15k
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Answer: A: Rpkm (R Code)
7.5 years ago by Devon Ryan 105k
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0
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15k
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Comment: C: Rpkm (R Code)
7.5 years ago by Devon Ryan 105k
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1.3k
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Answer: A: How to changing the Branding Title of Galaxy tools
7.5 years ago by Devon Ryan 105k
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2.0k
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Comment: C: Upsampling BAMs, or downsampling by A LOT?
7.5 years ago by Devon Ryan 105k
1
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2.8k
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Answer: A: Downstream analysis of bam files from scRNA-Seq Data
7.5 years ago by Devon Ryan 105k
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13k
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Comment: C: How to extract bigWig signal for a given bed file?
7.6 years ago by Devon Ryan 105k
1
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1
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1.3k
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Answer: A: reuse of compiled reference genome indices (BWA, Bowtie, Hisat etc)
7.6 years ago by Devon Ryan 105k
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2.4k
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Answer: A: computing time for BWA index
7.6 years ago by Devon Ryan 105k
2
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1
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1.9k
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Answer: A: alignment score and other values for the whole paired-end alignment (with overla
7.6 years ago by Devon Ryan 105k
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1
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3.4k
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Comment: C: Are merged bam files and merge fastq file -> bam files same?
7.6 years ago by Devon Ryan 105k
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1
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3.4k
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Comment: C: Are merged bam files and merge fastq file -> bam files same?
7.6 years ago by Devon Ryan 105k
0
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1
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3.4k
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Answer: A: Are merged bam files and merge fastq file -> bam files same?
7.6 years ago by Devon Ryan 105k
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5.1k
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Answer: A: Fastq and sam number of reads
7.6 years ago by Devon Ryan 105k
2
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0
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2.7k
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Answer: A: how I can prepare data for heat-map?
7.6 years ago by Devon Ryan 105k
1
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0
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1.3k
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Comment: C: Open-Source software. Good or bad for the market?
7.6 years ago by Devon Ryan 105k
0
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1.2k
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Comment: C: How can I know who has typed to me what messages?
7.6 years ago by Devon Ryan 105k
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1
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2.9k
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Comment: C: ChIP-seq: Should we be consistent with the control used (IgG/Input) among differ
7.6 years ago by Devon Ryan 105k
1
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1
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4.5k
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Comment: C: How to tell is sequencing data is unstranded, firststrand, or secondstrand
7.6 years ago by Devon Ryan 105k
2
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4.5k
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Comment: C: How to tell is sequencing data is unstranded, firststrand, or secondstrand
7.6 years ago by Devon Ryan 105k
1
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1
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4.5k
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Answer: A: How to tell is sequencing data is unstranded, firststrand, or secondstrand
7.6 years ago by Devon Ryan 105k
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0
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2.8k
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Comment: C: Scientist, Computational Biology
7.6 years ago by Devon Ryan 105k
1
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0
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1.9k
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Answer: A: Questions about Alignment and downstream workflow for scRNA-Seq Data
7.6 years ago by Devon Ryan 105k
11
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2
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11k
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Answer: A: If we use MACS2 do we need to remove duplicate sequences with samtools rmdup ?
7.6 years ago by Devon Ryan 105k
3
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1
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2.9k
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Answer: A: ChIP-seq: Should we be consistent with the control used (IgG/Input) among differ
7.6 years ago by Devon Ryan 105k
1
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0
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2.7k
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Comment: C: High Duplication and low coverage RNASeq?
7.6 years ago by Devon Ryan 105k
0
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1
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4.4k
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Comment: C: Number of Transcripts in GRCh38
7.6 years ago by Devon Ryan 105k
2
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2
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2.7k
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Answer: A: High Duplication and low coverage RNASeq?
7.6 years ago by Devon Ryan 105k
2
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0
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3.5k
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Answer: A: Comparison of bamCoverage log2 ratios in deeptools
7.6 years ago by Devon Ryan 105k
1
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0
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8.2k
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Comment: C: How to calculate moderated z-score (MODZ)
7.6 years ago by Devon Ryan 105k
2
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1
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15k
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Answer: A: Update samtools to the latest version
7.6 years ago by Devon Ryan 105k
1
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2
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8.2k
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Comment: C: How to calculate moderated z-score (MODZ)
7.6 years ago by Devon Ryan 105k
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1
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1.7k
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Answer: A: complex question cis-regulatory elements chip-seq
7.6 years ago by Devon Ryan 105k
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1
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1.6k
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Answer: A: DESeq2: before differential analysis
7.6 years ago by Devon Ryan 105k
1
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1
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3.3k
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Comment: C: Very few assigned reads during featurecount function of bioconductor in bacteria
7.6 years ago by Devon Ryan 105k
3
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2
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8.2k
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Answer: A: How to calculate moderated z-score (MODZ)
7.6 years ago by Devon Ryan 105k
10,053 results • Page 38 of 202
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