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Comment: C: What is difference between bulk RNAseq and mRNAseq?
5.0 years ago by Devon Ryan 105k
2
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21k
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Answer: A: Benjamini+ Hochberg multiple testing p.adjust R
5.0 years ago by Devon Ryan 105k
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21k
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Comment: C: Benjamini+ Hochberg multiple testing p.adjust R
5.0 years ago by Devon Ryan 105k
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4.8k
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Comment: C: Calculating fold change
5.0 years ago by Devon Ryan 105k
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7.6k
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Comment: C: What is difference between bulk RNAseq and mRNAseq?
5.0 years ago by Devon Ryan 105k
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3.5k
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Comment: C: Samtools merge BAM files using snakemake
5.1 years ago by Devon Ryan 105k
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1
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3.6k
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Comment: C: deepTools NPZ to PCA plot with modifications
5.1 years ago by Devon Ryan 105k
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3.5k
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Comment: C: Samtools merge BAM files using snakemake
5.1 years ago by Devon Ryan 105k
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3.5k
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Comment: C: Samtools merge BAM files using snakemake
5.1 years ago by Devon Ryan 105k
0
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1
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3.5k
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Comment: C: Samtools merge BAM files using snakemake
5.1 years ago by Devon Ryan 105k
2
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1
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3.6k
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Comment: C: deepTools NPZ to PCA plot with modifications
5.1 years ago by Devon Ryan 105k
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1
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3.5k
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Comment: C: Samtools merge BAM files using snakemake
5.1 years ago by Devon Ryan 105k
0
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1
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3.5k
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Comment: C: Samtools merge BAM files using snakemake
5.1 years ago by Devon Ryan 105k
2
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1
reply
3.5k
views
Answer: A: Samtools merge BAM files using snakemake
5.1 years ago by Devon Ryan 105k
0
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0
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3.6k
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Comment: C: deepTools NPZ to PCA plot with modifications
5.1 years ago by Devon Ryan 105k
2
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2
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3.6k
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Answer: A: deepTools NPZ to PCA plot with modifications
5.1 years ago by Devon Ryan 105k
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6.6k
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Answer: C: Help with DeepTools
5.1 years ago by Devon Ryan 105k
5
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1
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1.8k
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Answer: A: Which is the best approach to get DEG across one condition, in a three-factor de
5.1 years ago by Devon Ryan 105k
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1
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1.0k
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Answer: A: Python base versus specific environments
5.1 years ago by Devon Ryan 105k
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1
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4.2k
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Comment: C: SizeFactors for BAM normalization
5.1 years ago by Devon Ryan 105k
2
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2
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4.2k
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Comment: C: SizeFactors for BAM normalization
5.1 years ago by Devon Ryan 105k
2
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1
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5.7k
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Answer: A: Limma:Coefficients not estimable, please help
5.1 years ago by Devon Ryan 105k
5
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2
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4.2k
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Answer: A: SizeFactors for BAM normalization
5.1 years ago by Devon Ryan 105k
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5.6k
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Comment: C: TSS metaprofile using Deeptools
5.1 years ago by Devon Ryan 105k
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1
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12k
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Comment: C: cram file to fastq conversion
5.1 years ago by Devon Ryan 105k
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5.9k
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Comment: C: Deeptools ValueError: invalid literal for int() with base 10 error
5.1 years ago by Devon Ryan 105k
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1
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5.9k
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Comment: C: Deeptools ValueError: invalid literal for int() with base 10 error
5.1 years ago by Devon Ryan 105k
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1
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5.9k
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Comment: C: Deeptools ValueError: invalid literal for int() with base 10 error
5.1 years ago by Devon Ryan 105k
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1
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2.1k
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Comment: C: Salmon or Kallisto without reference transcriptome - possible?
5.2 years ago by Devon Ryan 105k
1
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0
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11k
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Comment: C: featureCounts for paired bam files and dealing with multimapping reads?
5.2 years ago by Devon Ryan 105k
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0
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16k
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Comment: C: Extract gene coordinates from GTF
5.2 years ago by Devon Ryan 105k
3
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2
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9.0k
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Comment: C: Is removing rRNA a necessary step in RNA-seq?
5.2 years ago by Devon Ryan 105k
6
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1.2k
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Answer: A: How to make it significant
5.2 years ago by Devon Ryan 105k
1
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2.5k
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Comment: C: how to extract intron coordinates (in bed) from bam
5.2 years ago by Devon Ryan 105k
2
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0
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8.7k
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Comment: C: Converting scRNA-Seq to Bulk-RNASeq
5.2 years ago by Devon Ryan 105k
1
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1
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5.3k
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Comment: C: How to find the differences in aligned bam files
5.2 years ago by Devon Ryan 105k
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0
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9.1k
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Comment: C: Featurecounts to DESEq2 - How to merge biological replicates?
5.2 years ago by Devon Ryan 105k
2
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1
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19k
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Answer: A: type='apeglm' shrinkage only for use with 'coef'
5.2 years ago by Devon Ryan 105k
1
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1
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2.5k
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Comment: C: how to extract intron coordinates (in bed) from bam
5.2 years ago by Devon Ryan 105k
0
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1
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2.5k
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Comment: C: how to extract intron coordinates (in bed) from bam
5.2 years ago by Devon Ryan 105k
0
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0
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3.2k
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Comment: C: ATAC-Seq: Filter bams for differential analysis or not
5.2 years ago by Devon Ryan 105k
3
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0
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2.1k
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Answer: A: Want to create a new Index file for BAM using SAMTOOLS. Do I need to sort the de
5.2 years ago by Devon Ryan 105k
0
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2
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3.2k
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Answer: A: ATAC-Seq: Filter bams for differential analysis or not
5.2 years ago by Devon Ryan 105k
0
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1
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1.6k
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Comment: C: RPKM for multi-copy genes
5.2 years ago by Devon Ryan 105k
0
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1
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1.6k
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Comment: C: RPKM for multi-copy genes
5.2 years ago by Devon Ryan 105k
1
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1
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5.3k
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Comment: C: How to find the differences in aligned bam files
5.2 years ago by Devon Ryan 105k
2
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1
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5.3k
views
Comment: C: How to find the differences in aligned bam files
5.2 years ago by Devon Ryan 105k
3
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0
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1.1k
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Answer: A: deeptools computeGCbias: what are the columns in the GCbiasFrequenciesFile?
5.2 years ago by Devon Ryan 105k
1
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0
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2.6k
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Comment: C: DESeq results based on lfcthreshold
5.2 years ago by Devon Ryan 105k
0
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1
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6.5k
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Comment: C: deepTools computeMatrix need at least one array to concatenate error
5.2 years ago by Devon Ryan 105k
10,053 results • Page 4 of 202
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