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3.8k
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Answer: A: Quick question: samtool idxstats and multiple mapping
8.1 years ago by Devon Ryan 105k
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4.5k
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Comment: C: GC & AT content calculation
8.1 years ago by Devon Ryan 105k
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3.9k
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Comment: C: edgeR error related to tximport
8.1 years ago by Devon Ryan 105k
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Answer: A: edgeR error related to tximport
8.1 years ago by Devon Ryan 105k
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Comment: C: How does HISAT calculate the alignment score? (and other TopHat to HISAT questio
8.1 years ago by Devon Ryan 105k
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1.6k
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Comment: C: Ori-Ter normalization [Chip-seq]
8.1 years ago by Devon Ryan 105k
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Comment: C: calculate fold change
8.1 years ago by Devon Ryan 105k
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Answer: A: How does HISAT calculate the alignment score? (and other TopHat to HISAT questio
8.1 years ago by Devon Ryan 105k
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4.5k
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Comment: C: RNA seq pipeline
8.1 years ago by Devon Ryan 105k
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Comment: C: RNA seq pipeline
8.1 years ago by Devon Ryan 105k
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4.4k
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Answer: A: From transcripts counts of Salmon to genes counts needed by edgeR
8.1 years ago by Devon Ryan 105k
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4.5k
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Comment: C: RNA seq pipeline
8.1 years ago by Devon Ryan 105k
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4.5k
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Comment: C: RNA seq pipeline
8.1 years ago by Devon Ryan 105k
3
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2.8k
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Comment: C: how to detect cross contamination of RNA-seq
8.1 years ago by Devon Ryan 105k
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4.5k
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Answer: A: Samtools fixmate changes bitwise flag 67 to 65 or 131 to 129
8.1 years ago by Devon Ryan 105k
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1
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4.3k
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Comment: C: calculate fold change
8.1 years ago by Devon Ryan 105k
2
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2.8k
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Answer: A: how to detect cross contamination of RNA-seq
8.1 years ago by Devon Ryan 105k
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3.7k
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Comment: C: Calculating FPKM values from HT-counts
8.1 years ago by Devon Ryan 105k
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2.8k
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Comment: C: How can I improve my R code?
8.1 years ago by Devon Ryan 105k
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2.8k
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Answer: A: How can I improve my R code?
8.1 years ago by Devon Ryan 105k
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6.2k
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Comment: C: error installing "org.Hs.eg.db"
8.1 years ago by Devon Ryan 105k
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1
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4.4k
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Comment: C: Adding gene ID in edgeR
8.1 years ago by Devon Ryan 105k
4
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11k
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Answer: A: featureCounts for paired bam files and dealing with multimapping reads?
8.1 years ago by Devon Ryan 105k
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4.4k
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Comment: C: Adding gene ID in edgeR
8.1 years ago by Devon Ryan 105k
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6.3k
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Comment: C: Call for requirement: a fast all-in-one FASTQ preprocessor (in C++, multi-thread
8.1 years ago by Devon Ryan 105k
1
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2
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2.5k
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Answer: A: Finding isoform in RNA-seq data
8.1 years ago by Devon Ryan 105k
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6.3k
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Comment: C: Call for requirement: a fast all-in-one FASTQ preprocessor (in C++, multi-thread
8.1 years ago by Devon Ryan 105k
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2
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6.3k
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Comment: C: Call for requirement: a fast all-in-one FASTQ preprocessor (in C++, multi-thread
8.1 years ago by Devon Ryan 105k
1
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1
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3.5k
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Comment: C: How to achieve the same alignment with HiSAT2 command line vs. HiSAT2 Galaxy
8.1 years ago by Devon Ryan 105k
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2.2k
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Comment: C: A question about differential expression analysis
8.1 years ago by Devon Ryan 105k
3
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2.2k
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Answer: A: A question about differential expression analysis
8.1 years ago by Devon Ryan 105k
3
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3.0k
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Answer: A: exon skipping and RNA-Seq
8.1 years ago by Devon Ryan 105k
3
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4.1k
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Comment: C: Intersection of multiple methods for RNA-Seq differential expression: conservati
8.1 years ago by Devon Ryan 105k
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3.1k
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Comment: C: Converting unstranded samples to strand specific
8.1 years ago by Devon Ryan 105k
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3.1k
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Answer: A: Converting unstranded samples to strand specific
8.1 years ago by Devon Ryan 105k
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1.8k
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Answer: A: sequence alignment using degenerated nucleotide codes as reference sequence
8.1 years ago by Devon Ryan 105k
1
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7.4k
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Comment: C: What is the actual cause of excessive zeroes in single cell RNA-seq data? Is it
8.1 years ago by Devon Ryan 105k
1
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0
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7.4k
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Comment: C: What is the actual cause of excessive zeroes in single cell RNA-seq data? Is it
8.1 years ago by Devon Ryan 105k
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1
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4.1k
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Comment: C: Very low Bisulfite seq mapping efficiency (~0%) for paired end.
8.1 years ago by Devon Ryan 105k
1
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2
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4.1k
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Comment: C: Very low Bisulfite seq mapping efficiency (~0%) for paired end.
8.1 years ago by Devon Ryan 105k
0
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0
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2.0k
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Comment: C: How can I make RSEM to align ChIPseq signal to the nearest gene?
8.1 years ago by Devon Ryan 105k
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0
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3.0k
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Comment: C: DESeq2 workflow for RNAseq
8.1 years ago by Devon Ryan 105k
1
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1
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2.0k
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Answer: C: How can I make RSEM to align ChIPseq signal to the nearest gene?
8.1 years ago by Devon Ryan 105k
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0
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11k
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Comment: C: How to convert BAM file from hg19 to hg38
8.1 years ago by Devon Ryan 105k
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0
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11k
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Comment: C: How to convert BAM file from hg19 to hg38
8.1 years ago by Devon Ryan 105k
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1
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2.0k
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Comment: C: How can I make RSEM to align ChIPseq signal to the nearest gene?
8.1 years ago by Devon Ryan 105k
0
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1
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4.1k
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Comment: C: Very low Bisulfite seq mapping efficiency (~0%) for paired end.
8.1 years ago by Devon Ryan 105k
2
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0
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11k
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Answer: A: How to convert BAM file from hg19 to hg38
8.1 years ago by Devon Ryan 105k
1
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2
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3.0k
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Answer: A: DESeq2 workflow for RNAseq
8.1 years ago by Devon Ryan 105k
0
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1
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3.8k
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Comment: C: DESeq2 with subset of genes
8.1 years ago by Devon Ryan 105k
10,053 results • Page 47 of 202
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