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3
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1
reply
6.0k
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Answer: A: BWA-MEM get different results with different threads
8.6 years ago by Devon Ryan 105k
2
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2
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13k
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Comment: C: SRR/ERR/DRR prefixes in SRA - What's the difference?
8.6 years ago by Devon Ryan 105k
0
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0
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6.1k
views
Comment: C: How to calculate "Tissue specificity score" using JSD
8.6 years ago by Devon Ryan 105k
4
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1
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5.4k
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Answer: A: STAR-2 PASS raw read mapping for SNP calling using GATK
8.6 years ago by Devon Ryan 105k
1
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1
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3.0k
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Comment: C: When I am trying to copy 9GB BAM files to the hard disk, the copied BAM file has
8.6 years ago by Devon Ryan 105k
1
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0
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2.7k
views
Comment: C: Upstream Regulator Gene Differential expression
8.6 years ago by Devon Ryan 105k
1
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1
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4.1k
views
Answer: A: Fisher exact test in R. Why it is row and column order dependent?
8.6 years ago by Devon Ryan 105k
2
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0
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6.1k
views
Answer: A: Is samtools' compression of bam to cram lossless?
8.6 years ago by Devon Ryan 105k
1
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1
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2.7k
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Comment: C: Upstream Regulator Gene Differential expression
8.6 years ago by Devon Ryan 105k
2
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1
reply
2.7k
views
Answer: A: Upstream Regulator Gene Differential expression
8.6 years ago by Devon Ryan 105k
0
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0
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2.4k
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Comment: C: pythonic way to get gene_id, gene_symbol from given list of gene, transcript co-
8.6 years ago by Devon Ryan 105k
1
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0
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2.4k
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Comment: C: pythonic way to get gene_id, gene_symbol from given list of gene, transcript co-
8.6 years ago by Devon Ryan 105k
1
vote
1
reply
2.4k
views
Comment: C: pythonic way to get gene_id, gene_symbol from given list of gene, transcript co-
8.6 years ago by Devon Ryan 105k
0
votes
1
reply
2.4k
views
Comment: C: pythonic way to get gene_id, gene_symbol from given list of gene, transcript co-
8.6 years ago by Devon Ryan 105k
1
vote
1
reply
2.4k
views
Answer: C: pythonic way to get gene_id, gene_symbol from given list of gene, transcript co-
8.6 years ago by Devon Ryan 105k
0
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0
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1.8k
views
Comment: C: Selecting of most differentially expressed transcripts
8.6 years ago by Devon Ryan 105k
2
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1
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4.2k
views
Comment: C: DNA fragmentation is biased
8.6 years ago by Devon Ryan 105k
0
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0
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3.1k
views
Answer: A: How to get the number of exon within genes from GRCH37 reference
8.6 years ago by Devon Ryan 105k
4
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0
replies
4.9k
views
Comment: C: Calculating fold change
8.6 years ago by Devon Ryan 105k
1
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0
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1.8k
views
Answer: A: Selecting of most differentially expressed transcripts
8.6 years ago by Devon Ryan 105k
1
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0
replies
2.8k
views
Comment: C: How to understand likelihood ratio (LR) in GWAS?
8.6 years ago by Devon Ryan 105k
0
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1
reply
2.0k
views
Answer: A: The problem using samtools stats
8.6 years ago by Devon Ryan 105k
2
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0
replies
2.0k
views
Answer: A: Getting No. of reads from BAM by pysam (ChIP-seq)
8.6 years ago by Devon Ryan 105k
1
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0
replies
2.0k
views
Comment: C: Getting No. of reads from BAM by pysam (ChIP-seq)
8.6 years ago by Devon Ryan 105k
2
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1
reply
2.4k
views
Answer: A: RSEM: identical expression for different cufflinks transcripts
8.6 years ago by Devon Ryan 105k
0
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0
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3.0k
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Comment: C: alignment of sequencing data to the tRNA transcriptome
8.6 years ago by Devon Ryan 105k
0
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2
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3.0k
views
Comment: C: alignment of sequencing data to the tRNA transcriptome
8.6 years ago by Devon Ryan 105k
0
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1
reply
3.7k
views
Comment: C: HISAT2 output statistics does not match the actual output
8.6 years ago by Devon Ryan 105k
1
vote
1
reply
3.7k
views
Comment: C: HISAT2 output statistics does not match the actual output
8.6 years ago by Devon Ryan 105k
1
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0
replies
3.7k
views
Comment: C: HISAT2 output statistics does not match the actual output
8.6 years ago by Devon Ryan 105k
0
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1
reply
3.7k
views
Comment: C: HISAT2 output statistics does not match the actual output
8.6 years ago by Devon Ryan 105k
0
votes
0
replies
1.3k
views
Answer: A: Number of sequenced positions from a BAM file
8.6 years ago by Devon Ryan 105k
2
votes
0
replies
15k
views
Comment: C: Differences between trimming tools: cutadapt, bbduk and sickle
8.6 years ago by Devon Ryan 105k
1
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0
replies
2.9k
views
Comment: C: Variant callers reporting different read depth on same alignment
8.6 years ago by Devon Ryan 105k
2
votes
0
replies
1.5k
views
Answer: A: removal of organelles reads from raw read using hisat2
8.6 years ago by Devon Ryan 105k
1
vote
0
replies
2.3k
views
Answer: A: featureCounts output - assignment percentage
8.6 years ago by Devon Ryan 105k
0
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1
reply
4.2k
views
Comment: C: Creating coverage files containing paired-end fragments of particular sizes
8.6 years ago by Devon Ryan 105k
0
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0
replies
1.7k
views
Answer: A: HTseq report 80% of reads no feature
8.6 years ago by Devon Ryan 105k
1
vote
0
replies
1.6k
views
Answer: A: GFF end coordinate used by mappers to determine gene transcription termination
8.6 years ago by Devon Ryan 105k
0
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1
reply
4.2k
views
Comment: C: Creating coverage files containing paired-end fragments of particular sizes
8.6 years ago by Devon Ryan 105k
0
votes
0
replies
1.6k
views
Comment: C: How to determine if a sequence is nonsatellite sequence?
8.6 years ago by Devon Ryan 105k
1
vote
1
reply
2.0k
views
Answer: A: how to incorporate the gene ids/in tophat query
8.6 years ago by Devon Ryan 105k
0
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0
replies
3.1k
views
Comment: C: chipseq data analysis
8.6 years ago by Devon Ryan 105k
0
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1
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4.2k
views
Comment: C: Creating coverage files containing paired-end fragments of particular sizes
8.6 years ago by Devon Ryan 105k
0
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1
reply
3.6k
views
Comment: C: Differentially expressed genes with sleuth- RStudio
8.6 years ago by Devon Ryan 105k
0
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1
reply
4.2k
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Comment: C: Creating coverage files containing paired-end fragments of particular sizes
8.6 years ago by Devon Ryan 105k
0
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1
reply
4.2k
views
Comment: C: Creating coverage files containing paired-end fragments of particular sizes
8.6 years ago by Devon Ryan 105k
0
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0
replies
4.6k
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Comment: C: [edgeR usage] Comparing categories of fewer input variables for differential gen
8.6 years ago by Devon Ryan 105k
0
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1
reply
4.2k
views
Comment: C: Creating coverage files containing paired-end fragments of particular sizes
8.6 years ago by Devon Ryan 105k
0
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1
reply
4.2k
views
Comment: C: Creating coverage files containing paired-end fragments of particular sizes
8.6 years ago by Devon Ryan 105k
10,053 results • Page 62 of 202
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