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Comment: C: SAM files alignment section: PNEXT
8.7 years ago by Devon Ryan 105k
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Comment: C: Bowtie2-build cannot build an index
8.7 years ago by Devon Ryan 105k
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Comment: C: Lost in "if else" statement R
8.7 years ago by Devon Ryan 105k
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Answer: A: Lost in "if else" statement R
8.7 years ago by Devon Ryan 105k
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Comment: C: SAM files alignment section: PNEXT
8.7 years ago by Devon Ryan 105k
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Comment: C: Different mapping rate for tophat+mm9 vs star+mm10
8.7 years ago by Devon Ryan 105k
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Answer: A: SAM files alignment section: PNEXT
8.8 years ago by Devon Ryan 105k
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Comment: C: Pysam - Different amount of mapped and aligned reads
8.8 years ago by Devon Ryan 105k
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Comment: C: Pysam - Different amount of mapped and aligned reads
8.8 years ago by Devon Ryan 105k
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2.8k
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Comment: C: TopHat Report Transcript Alignment
8.8 years ago by Devon Ryan 105k
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2.8k
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Comment: C: TopHat Report Transcript Alignment
8.8 years ago by Devon Ryan 105k
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Answer: A: Filter hits that aligned concordantly exactly 1 times base on mpq>40
8.8 years ago by Devon Ryan 105k
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5.6k
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Comment: C: How to find the differences in aligned bam files
8.8 years ago by Devon Ryan 105k
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5.6k
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Comment: C: How to find the differences in aligned bam files
8.8 years ago by Devon Ryan 105k
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Comment: C: Threading Building Blocks library not found for bowtie
8.8 years ago by Devon Ryan 105k
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2.2k
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Answer: A: Threading Building Blocks library not found for bowtie
8.8 years ago by Devon Ryan 105k
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1.5k
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Comment: C: SNPEff error on Galaxy cloud deployed instance, how to fix?
8.8 years ago by Devon Ryan 105k
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Comment: C: Why we need a distributed assembler based on MPI/Mapreduce when we can store Deb
8.8 years ago by Devon Ryan 105k
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3.0k
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Comment: C: How to extract all - strand mapped reads location of reference genome using BAM
8.8 years ago by Devon Ryan 105k
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3.0k
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Comment: C: How to extract all - strand mapped reads location of reference genome using BAM
8.8 years ago by Devon Ryan 105k
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2.8k
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Comment: C: DESeq data diagnosis problem (MAplot, dispersion)
8.8 years ago by Devon Ryan 105k
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2.8k
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Comment: C: DESeq data diagnosis problem (MAplot, dispersion)
8.8 years ago by Devon Ryan 105k
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2.6k
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Comment: C: error in bowtie 2
8.8 years ago by Devon Ryan 105k
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3.2k
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Comment: C: Necessary to close pysam.AlignmentFile?
8.8 years ago by Devon Ryan 105k
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4.2k
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Comment: C: RNA Seq analysis of virally infected cells
8.8 years ago by Devon Ryan 105k
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1
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7.3k
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Comment: C: Aggregating Gene Expression Across Rows
8.8 years ago by Devon Ryan 105k
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Answer: A: Common Cutoff in TPM unit to filter out gene considered as low expressed.
8.8 years ago by Devon Ryan 105k
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8.0k
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Comment: C: Removal of repeat and blacklist regions from ChIP-seq data
8.8 years ago by Devon Ryan 105k
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1
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8.0k
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Comment: C: Removal of repeat and blacklist regions from ChIP-seq data
8.8 years ago by Devon Ryan 105k
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1
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2.5k
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Comment: C: Two Bioinformaticians @ MPI-IE Freiburg, Germany
8.8 years ago by Devon Ryan 105k
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8.0k
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Answer: A: Removal of repeat and blacklist regions from ChIP-seq data
8.8 years ago by Devon Ryan 105k
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5.3k
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Comment: C: Do I have to use beta-values/m-values for RRBS/WGBS data ?
8.8 years ago by Devon Ryan 105k
2
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1
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3.2k
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Answer: A: Necessary to close pysam.AlignmentFile?
8.8 years ago by Devon Ryan 105k
1
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1
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5.3k
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Answer: A: Do I have to use beta-values/m-values for RRBS/WGBS data ?
8.8 years ago by Devon Ryan 105k
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1
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2.3k
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Comment: C: Matching BAM and FASTA files for S. Cerevisiae
8.8 years ago by Devon Ryan 105k
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1
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2.3k
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Comment: C: Matching BAM and FASTA files for S. Cerevisiae
8.8 years ago by Devon Ryan 105k
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2.5k
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Answer: A: Problem Converting BAM to SAM on to Amazon-S3 Using Samtools
8.8 years ago by Devon Ryan 105k
2
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1
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6.8k
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Comment: C: Main difference between RSEM and k-mer based quantification methods
8.8 years ago by Devon Ryan 105k
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3.2k
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Comment: C: Why Ribo-seq not as popular as RNA-seq?
8.8 years ago by Devon Ryan 105k
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1
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4.5k
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Comment: C: DESeq work flow in Galaxy
8.8 years ago by Devon Ryan 105k
1
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1
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3.2k
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Answer: A: Why Ribo-seq not as popular as RNA-seq?
8.8 years ago by Devon Ryan 105k
9
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1
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6.9k
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Answer: A: how to get Homo_sapiens.GRCh38.84.bed file
8.8 years ago by Devon Ryan 105k
1
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1
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4.5k
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Comment: C: DESeq work flow in Galaxy
8.8 years ago by Devon Ryan 105k
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1
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2.6k
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Comment: C: Invariant base quality calls
8.8 years ago by Devon Ryan 105k
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1
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2.6k
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Comment: C: Invariant base quality calls
8.8 years ago by Devon Ryan 105k
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1
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2.6k
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Comment: C: Invariant base quality calls
8.8 years ago by Devon Ryan 105k
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1
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4.2k
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Comment: C: RNA Seq analysis of virally infected cells
8.8 years ago by Devon Ryan 105k
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3
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4.2k
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Answer: A: RNA Seq analysis of virally infected cells
8.8 years ago by Devon Ryan 105k
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3.9k
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Comment: C: Ensembl GTF for Mouse that includes intron, exons, utrs, etc.
8.8 years ago by Devon Ryan 105k
0
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1
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3.9k
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Comment: C: Ensembl GTF for Mouse that includes intron, exons, utrs, etc.
8.8 years ago by Devon Ryan 105k
10,053 results • Page 65 of 202
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