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7.5k
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Comment: C: Tophat and Bowtie installed with Conda not working on test data.
8.9 years ago by Devon Ryan 105k
0
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1
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6.9k
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Comment: C: Samtools idxstats fails to load index
8.9 years ago by Devon Ryan 105k
2
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2.5k
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Comment: C: Ht-seq count stranded=Yes question
8.9 years ago by Devon Ryan 105k
0
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1
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6.9k
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Answer: A: Samtools idxstats fails to load index
8.9 years ago by Devon Ryan 105k
1
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0
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4.3k
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Comment: C: In this Python script I want to save result of print(traj_rmsd) in an output.xv
8.9 years ago by Devon Ryan 105k
5
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1.7k
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Answer: A: append to column in bedfile
8.9 years ago by Devon Ryan 105k
0
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0
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3.6k
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Comment: C: PileOMeth double counting when paired-end reads overlap?
8.9 years ago by Devon Ryan 105k
0
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1
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3.5k
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Comment: C: How many tests does it take to warrant a microarray/RNA-seq approach to differen
8.9 years ago by Devon Ryan 105k
0
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0
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2.1k
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Comment: C: Bismark html processing report error
8.9 years ago by Devon Ryan 105k
2
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1
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3.5k
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Answer: A: How many tests does it take to warrant a microarray/RNA-seq approach to differen
8.9 years ago by Devon Ryan 105k
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0
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1.8k
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Comment: C: Discrimination between samples
8.9 years ago by Devon Ryan 105k
2
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1
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3.0k
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Comment: C: Differential expression analysis with RNA-Seq samples that vary in depth
8.9 years ago by Devon Ryan 105k
2
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0
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2.0k
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Answer: A: NGS RNA-seq data for gene expression
8.9 years ago by Devon Ryan 105k
0
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0
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2.2k
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Comment: C: Access to HISAT2 folder under miniconda
8.9 years ago by Devon Ryan 105k
1
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0
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1.8k
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Comment: C: Effects of cohort size on survival estimation
8.9 years ago by Devon Ryan 105k
0
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0
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3.1k
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Comment: C: ribosomal RNA contamination
8.9 years ago by Devon Ryan 105k
0
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0
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3.0k
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Comment: C: Differential expression analysis with RNA-Seq samples that vary in depth
8.9 years ago by Devon Ryan 105k
2
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1
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3.1k
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Answer: A: ribosomal RNA contamination
8.9 years ago by Devon Ryan 105k
2
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1
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2.0k
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Comment: C: reads diffreence in fastqc and Tophat input
8.9 years ago by Devon Ryan 105k
1
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1
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3.0k
views
Answer: A: Differential expression analysis with RNA-Seq samples that vary in depth
8.9 years ago by Devon Ryan 105k
6
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2
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32k
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Answer: A: needleman-wunsch algorithm on python
8.9 years ago by Devon Ryan 105k
0
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0
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32k
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Comment: C: needleman-wunsch algorithm on python
8.9 years ago by Devon Ryan 105k
0
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1
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32k
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Comment: C: needleman-wunsch algorithm on python
8.9 years ago by Devon Ryan 105k
0
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0
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2.1k
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Comment: C: how the chip-seq is represented?
8.9 years ago by Devon Ryan 105k
1
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1
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47k
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Comment: C: Duplicates on Illumina
8.9 years ago by Devon Ryan 105k
1
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1
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4.7k
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Answer: A: cuffdiff vs cuffnorm vs cuffquant
8.9 years ago by Devon Ryan 105k
0
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1
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4.9k
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Comment: C: ImportError: cannot import name getoutput (Biopython)
8.9 years ago by Devon Ryan 105k
2
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0
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2.6k
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Answer: A: Viewing RNA-seq data by IGV, I found that position of some indels shifts bases.
8.9 years ago by Devon Ryan 105k
1
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0
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8.4k
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Comment: C: RNA seq analysis using STAR+StringTie
8.9 years ago by Devon Ryan 105k
4
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0
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1.7k
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Answer: A: Interpreting ChIP-qPCR or ChIP-seq
8.9 years ago by Devon Ryan 105k
1
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1
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5.6k
views
Comment: C: How to smooth (ggplot2) 3 samples in the same plot
8.9 years ago by Devon Ryan 105k
1
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1
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5.6k
views
Answer: C: How to smooth (ggplot2) 3 samples in the same plot
8.9 years ago by Devon Ryan 105k
1
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1
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1.6k
views
Answer: A: conversion of co-expression matrix in to vector using R
8.9 years ago by Devon Ryan 105k
3
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1
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2.7k
views
Answer: A: Weird issue with bam file generated by samtools
8.9 years ago by Devon Ryan 105k
2
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0
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4.7k
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Comment: C: plot a smoth TSS profile in R
8.9 years ago by Devon Ryan 105k
1
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1
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4.0k
views
Comment: C: anlyzing expression of gene from sra database
8.9 years ago by Devon Ryan 105k
2
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1
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2.1k
views
Answer: A: Change signification in bam for duplicates
8.9 years ago by Devon Ryan 105k
3
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0
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3.8k
views
Comment: C: Possible bug in seqkit?
8.9 years ago by Devon Ryan 105k
2
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1
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4.7k
views
Comment: C: plot a smoth TSS profile in R
8.9 years ago by Devon Ryan 105k
3
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0
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1.8k
views
Answer: A: DE analysis of low-expression transcripts
8.9 years ago by Devon Ryan 105k
1
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1
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3.8k
views
Comment: C: Possible bug in seqkit?
8.9 years ago by Devon Ryan 105k
2
votes
1
reply
4.7k
views
Answer: A: plot a smoth TSS profile in R
8.9 years ago by Devon Ryan 105k
2
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0
replies
3.8k
views
Comment: C: Possible bug in seqkit?
8.9 years ago by Devon Ryan 105k
1
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0
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2.3k
views
Answer: A: Extract reads mapping to unannotated regions
8.9 years ago by Devon Ryan 105k
0
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2
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2.3k
views
Comment: C: SVM based VCF filter
8.9 years ago by Devon Ryan 105k
1
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1
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3.9k
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Answer: A: Cufflink on multiple bam files
8.9 years ago by Devon Ryan 105k
0
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0
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47k
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Comment: C: Duplicates on Illumina
8.9 years ago by Devon Ryan 105k
0
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1
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47k
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Comment: C: Duplicates on Illumina
8.9 years ago by Devon Ryan 105k
0
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0
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4.3k
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Comment: C: SAM / BAM alignments
8.9 years ago by Devon Ryan 105k
1
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0
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4.0k
views
Comment: C: Bioinformatics in a clinical diagnostic setting versus research (academia)
8.9 years ago by Devon Ryan 105k
10,053 results • Page 69 of 202
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