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484
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Comment:
Comment: Deeptools scale issue for plotHeatmap
5 weeks ago by
Devon Ryan
104k
0
votes
1
reply
484
views
Comment:
Comment: Deeptools scale issue for plotHeatmap
5 weeks ago by
Devon Ryan
104k
0
votes
1
reply
484
views
Comment:
Comment: Deeptools scale issue for plotHeatmap
5 weeks ago by
Devon Ryan
104k
1
vote
1
reply
494
views
Comment:
Comment: Wrong in Deeptools : the enrichment of TSS and TES region are similar when using
5 months ago by
Devon Ryan
104k
1
vote
0
replies
597
views
Comment:
Comment: How to get ncol = nrow?
6 months ago by
Devon Ryan
104k
2
votes
1
reply
1.4k
views
Comment:
Comment: ChIP-seq visualization: Is it valid to do a coverage normalization in addition t
7 months ago by
Devon Ryan
104k
0
votes
0
replies
527
views
Comment:
Comment: DESeq2 : parameter of Negative Binomial model in a context of gene expression
11 months ago by
Devon Ryan
104k
0
votes
0
replies
857
views
Comment:
Comment: How Wald test calculates p-values in DESeq2?
18 months ago by
Devon Ryan
104k
1
vote
1
reply
13k
views
Comment:
Comment: Convert fastq.gz to fastq.bgz
19 months ago by
Devon Ryan
104k
1
vote
0
replies
596
views
Comment:
Comment: Why the number of genes decreased after dds (DESeqDataSetFromMatrix)?
19 months ago by
Devon Ryan
104k
0
votes
0
replies
1.9k
views
Comment:
Comment: Come work with me! Bioinformatician - Boston MA
19 months ago by
Devon Ryan
104k
1
vote
1
reply
1.9k
views
Comment:
Comment: Come work with me! Bioinformatician - Boston MA
19 months ago by
Devon Ryan
104k
1
vote
1
reply
681
views
Comment:
Comment: Calculate the ratio of H3K4me3 to H3K4me1 using output of deeptools computeMatri
2.0 years ago by
Devon Ryan
104k
1
vote
1
reply
1.8k
views
Comment:
Comment: Pool or not to pool
2.1 years ago by
Devon Ryan
104k
2
votes
1
reply
1.8k
views
Comment:
Comment: Pool or not to pool
2.1 years ago by
Devon Ryan
104k
1
vote
1
reply
1.8k
views
Comment:
Comment: Pool or not to pool
2.1 years ago by
Devon Ryan
104k
1
vote
1
reply
1.4k
views
Comment:
Comment: BAM > featurecount > DEseq2 Nextflow/Snakemake pipeline
2.1 years ago by
Devon Ryan
104k
0
votes
0
replies
3.3k
views
Comment:
Comment: Why piping a conda command into bash doesn't work ?
2.1 years ago by
Devon Ryan
104k
1
vote
2
replies
3.3k
views
Comment:
Comment: Why piping a conda command into bash doesn't work ?
2.1 years ago by
Devon Ryan
104k
1
vote
0
replies
2.4k
views
Comment:
Comment: Extracting Methylation Data
2.2 years ago by
Devon Ryan
104k
1
vote
0
replies
2.4k
views
Comment:
Comment: Unexpected Bowtie2 behavior with --phred64 and --phred33 flags
2.2 years ago by
Devon Ryan
104k
1
vote
0
replies
935
views
Comment:
Comment: bisulfite methylation alignment rate
2.2 years ago by
Devon Ryan
104k
0
votes
0
replies
10k
views
Comment:
Comment: DESeq2 modelling and Wald's test
2.2 years ago by
Devon Ryan
104k
1
vote
1
reply
2.4k
views
Comment:
Comment: Unexpected Bowtie2 behavior with --phred64 and --phred33 flags
2.2 years ago by
Devon Ryan
104k
2
votes
1
reply
2.7k
views
Comment:
Comment: normalization for unsupervised analysis by DESeq2
2.2 years ago by
Devon Ryan
104k
0
votes
1
reply
935
views
Comment:
Comment: bisulfite methylation alignment rate
2.2 years ago by
Devon Ryan
104k
0
votes
0
replies
4.1k
views
Comment:
Comment: HIsat2 bam and summary output - multiple output file type
2.3 years ago by
Devon Ryan
104k
2
votes
0
replies
2.7k
views
Comment:
Comment: normalization for unsupervised analysis by DESeq2
2.3 years ago by
Devon Ryan
104k
0
votes
0
replies
8.9k
views
Comment:
Comment: featureCounts isoform vs gene summarization
2.3 years ago by
Devon Ryan
104k
1
vote
0
replies
1.9k
views
Comment:
Comment: delete a file
2.3 years ago by
Devon Ryan
104k
0
votes
0
replies
1.4k
views
Comment:
Comment: Log2 Scale Deeptools
2.4 years ago by
Devon Ryan
104k
1
vote
1
reply
1.7k
views
Comment:
Comment: ? in cram files
2.5 years ago by
Devon Ryan
104k
1
vote
0
replies
1.9k
views
Comment:
Comment: Singularity container for deepTools?
2.6 years ago by
Devon Ryan
104k
0
votes
0
replies
1.9k
views
Comment:
Comment: Kmergenie module readfq not found
2.6 years ago by
Devon Ryan
104k
0
votes
0
replies
1.6k
views
Comment:
Comment: DESeq2 Not full Rank - Age & Medication
2.6 years ago by
Devon Ryan
104k
2
votes
1
reply
1.6k
views
Comment:
Comment: DESeq2 Not full Rank - Age & Medication
2.6 years ago by
Devon Ryan
104k
1
vote
0
replies
1.3k
views
Comment:
Comment: Bedfile format deeptools
2.6 years ago by
Devon Ryan
104k
0
votes
1
reply
891
views
Comment:
Comment: Methylome Data or DE Analysis
2.7 years ago by
Devon Ryan
104k
1
vote
0
replies
1.7k
views
Comment:
Comment: Inserting Gaps into FASTA files for Alignment to Reference
2.7 years ago by
Devon Ryan
104k
1
vote
0
replies
4.2k
views
Comment:
Comment: GC content in bilsulfite converted library
2.7 years ago by
Devon Ryan
104k
0
votes
1
reply
12k
views
Comment:
Comment: ViennaRNA error: ImportError: No module named _RNA
2.8 years ago by
Devon Ryan
104k
3
votes
0
replies
1.3k
views
Comment:
Comment: Using RefSeq gene annotation file to determine gene lengths
2.8 years ago by
Devon Ryan
104k
4
votes
1
reply
1.1k
views
Comment:
Comment: Bioinformatics Definitions
2.8 years ago by
Devon Ryan
104k
0
votes
0
replies
4.4k
views
Comment:
Comment: Installing samtools version 1.12
2.9 years ago by
Devon Ryan
104k
2
votes
1
reply
1.6k
views
Comment:
Comment: How much weights a million reads
2.9 years ago by
Devon Ryan
104k
0
votes
0
replies
3.7k
views
Comment:
Comment: When is recommended to remove or keep Unpaired "Orphan" reads in downstream anal
2.9 years ago by
Devon Ryan
104k
0
votes
1
reply
1.3k
views
Comment:
Comment: Multi-factor Analysis in DeSEQ2
2.9 years ago by
Devon Ryan
104k
0
votes
0
replies
2.7k
views
Comment:
Comment: deeptools 3.5 Segmentation fault:11
2.9 years ago by
Devon Ryan
104k
0
votes
1
reply
2.7k
views
Comment:
Comment: deeptools 3.5 Segmentation fault:11
2.9 years ago by
Devon Ryan
104k
0
votes
1
reply
2.7k
views
Comment:
Comment: deeptools 3.5 Segmentation fault:11
2.9 years ago by
Devon Ryan
104k
7,141 results • Page
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