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2
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Comment: Comment: ChIP-seq visualization: Is it valid to do a coverage normalization in addition t
19 days ago by Devon Ryan 103k
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339
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Comment: Comment: DESeq2 : parameter of Negative Binomial model in a context of gene expression
4 months ago by Devon Ryan 103k
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0
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629
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Comment: Comment: How Wald test calculates p-values in DESeq2?
11 months ago by Devon Ryan 103k
1
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1
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12k
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Comment: Comment: Convert fastq.gz to fastq.bgz
11 months ago by Devon Ryan 103k
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0
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431
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Comment: Comment: Why the number of genes decreased after dds (DESeqDataSetFromMatrix)?
11 months ago by Devon Ryan 103k
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0
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1.4k
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Comment: Comment: Come work with me! Bioinformatician - Boston MA
12 months ago by Devon Ryan 103k
1
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1
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1.4k
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Comment: Comment: Come work with me! Bioinformatician - Boston MA
12 months ago by Devon Ryan 103k
1
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1
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521
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Comment: Comment: Calculate the ratio of H3K4me3 to H3K4me1 using output of deeptools computeMatri
17 months ago by Devon Ryan 103k
1
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1
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1.4k
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Comment: Comment: Pool or not to pool
18 months ago by Devon Ryan 103k
2
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1
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1.4k
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Comment: Comment: Pool or not to pool
18 months ago by Devon Ryan 103k
1
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1
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1.4k
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Comment: Comment: Pool or not to pool
18 months ago by Devon Ryan 103k
1
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1
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1.2k
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Comment: Comment: BAM > featurecount > DEseq2 Nextflow/Snakemake pipeline
18 months ago by Devon Ryan 103k
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0
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2.6k
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Comment: Comment: Why piping a conda command into bash doesn't work ?
18 months ago by Devon Ryan 103k
1
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2
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2.6k
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Comment: Comment: Why piping a conda command into bash doesn't work ?
18 months ago by Devon Ryan 103k
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0
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2.0k
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Comment: Comment: Extracting Methylation Data
19 months ago by Devon Ryan 103k
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0
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2.1k
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Comment: Comment: Unexpected Bowtie2 behavior with --phred64 and --phred33 flags
19 months ago by Devon Ryan 103k
1
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0
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669
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Comment: Comment: bisulfite methylation alignment rate
20 months ago by Devon Ryan 103k
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0
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9.4k
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Comment: Comment: DESeq2 modelling and Wald's test
20 months ago by Devon Ryan 103k
1
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1
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2.1k
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Comment: Comment: Unexpected Bowtie2 behavior with --phred64 and --phred33 flags
20 months ago by Devon Ryan 103k
2
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1
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2.2k
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Comment: Comment: normalization for unsupervised analysis by DESeq2
20 months ago by Devon Ryan 103k
0
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1
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669
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Comment: Comment: bisulfite methylation alignment rate
20 months ago by Devon Ryan 103k
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0
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3.5k
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Comment: Comment: HIsat2 bam and summary output - multiple output file type
20 months ago by Devon Ryan 103k
2
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0
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2.2k
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Comment: Comment: normalization for unsupervised analysis by DESeq2
20 months ago by Devon Ryan 103k
0
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0
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8.4k
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Comment: Comment: featureCounts isoform vs gene summarization
20 months ago by Devon Ryan 103k
1
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0
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1.5k
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Comment: Comment: delete a file
20 months ago by Devon Ryan 103k
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0
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1.1k
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Comment: Comment: Log2 Scale Deeptools
22 months ago by Devon Ryan 103k
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1
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1.4k
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Comment: Comment: ? in cram files
23 months ago by Devon Ryan 103k
1
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0
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1.6k
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Comment: Comment: Singularity container for deepTools?
23 months ago by Devon Ryan 103k
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0
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1.6k
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Comment: Comment: Kmergenie module readfq not found
2.0 years ago by Devon Ryan 103k
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0
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1.3k
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Comment: Comment: DESeq2 Not full Rank - Age & Medication
2.0 years ago by Devon Ryan 103k
2
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1
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1.3k
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Comment: Comment: DESeq2 Not full Rank - Age & Medication
2.0 years ago by Devon Ryan 103k
1
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0
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1.1k
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Comment: Comment: Bedfile format deeptools
2.1 years ago by Devon Ryan 103k
0
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1
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718
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Comment: Comment: Methylome Data or DE Analysis
2.1 years ago by Devon Ryan 103k
1
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0
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1.4k
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Comment: Comment: Inserting Gaps into FASTA files for Alignment to Reference
2.2 years ago by Devon Ryan 103k
1
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0
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3.8k
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Comment: Comment: GC content in bilsulfite converted library
2.2 years ago by Devon Ryan 103k
0
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1
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11k
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Comment: Comment: ViennaRNA error: ImportError: No module named _RNA
2.2 years ago by Devon Ryan 103k
3
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0
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1.1k
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Comment: Comment: Using RefSeq gene annotation file to determine gene lengths
2.2 years ago by Devon Ryan 103k
4
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1
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898
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Comment: Comment: Bioinformatics Definitions
2.2 years ago by Devon Ryan 103k
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0
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3.5k
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Comment: Comment: Installing samtools version 1.12
2.3 years ago by Devon Ryan 103k
2
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1
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1.3k
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Comment: Comment: How much weights a million reads
2.3 years ago by Devon Ryan 103k
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0
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3.3k
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Comment: Comment: When is recommended to remove or keep Unpaired "Orphan" reads in downstream anal
2.3 years ago by Devon Ryan 103k
0
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1
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1.1k
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Comment: Comment: Multi-factor Analysis in DeSEQ2
2.3 years ago by Devon Ryan 103k
0
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0
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2.3k
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Comment: Comment: deeptools 3.5 Segmentation fault:11
2.3 years ago by Devon Ryan 103k
0
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1
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2.3k
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Comment: Comment: deeptools 3.5 Segmentation fault:11
2.3 years ago by Devon Ryan 103k
0
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1
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2.3k
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Comment: Comment: deeptools 3.5 Segmentation fault:11
2.3 years ago by Devon Ryan 103k
0
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0
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616
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Comment: Comment: Performance metrics of aligners and variant callers
2.4 years ago by Devon Ryan 103k
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1
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3.7k
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Comment: Comment: Multiqc
2.4 years ago by Devon Ryan 103k
1
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0
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2.4k
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Comment: Comment: Deeptools, ComputeMatrix and plotProfile
2.4 years ago by Devon Ryan 103k
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0
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673
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Comment: Comment: Does GISAID fasta files contain spike protein or whole genome sequence?
2.4 years ago by Devon Ryan 103k
0
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1
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3.5k
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Comment: Comment: DESeq2 multi-factor design
2.4 years ago by Devon Ryan 103k
7,136 results • Page 1 of 143
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