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388
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Comment:
Comment: Would you recommend me any tool to assign protein family membership to an aminoa
7 weeks ago by
v.berriosfarias
▴ 140
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0
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723
views
Comment:
Comment: What are unbinned contigs ?
6 months ago by
v.berriosfarias
▴ 140
0
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1
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951
views
Comment:
Comment: Would you recommend me a binning tool ?
9 months ago by
v.berriosfarias
▴ 140
0
votes
0
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1.6k
views
Comment:
Comment: Trying to use hmmer to search genes over metagenome assembled genomes
10 months ago by
v.berriosfarias
▴ 140
0
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0
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885
views
Comment:
Comment: featureCounts: ERROR: failed to find the gene identifier attribute
11 months ago by
v.berriosfarias
▴ 140
0
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0
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815
views
Comment:
Comment: Any way to retrieve the annotation information of genomes under a bioproject ? (
13 months ago by
v.berriosfarias
▴ 140
0
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0
replies
1.7k
views
Comment:
Comment: how to remove a substring for multiple file names?
15 months ago by
v.berriosfarias
▴ 140
0
votes
1
reply
632
views
Comment:
Comment: trying to look the version of the programs under miniconda3 directory
15 months ago by
v.berriosfarias
▴ 140
0
votes
1
reply
1.4k
views
Comment:
Comment: Does ASVs IDs from dada2 have specific taxonomic assignments?
20 months ago by
v.berriosfarias
▴ 140
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0
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1.8k
views
Comment:
Comment: Has anybody managed to install and run GroopM lately?
20 months ago by
v.berriosfarias
▴ 140
0
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0
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865
views
Comment:
Comment: How to remove [ACTG] from file names in bash
22 months ago by
v.berriosfarias
▴ 140
0
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0
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643
views
Comment:
Comment: Problem when converting from blast output table to GTF file.
23 months ago by
v.berriosfarias
▴ 140
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0
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898
views
Comment:
Comment: gene abundance profiling from metagenomes
23 months ago by
v.berriosfarias
▴ 140
0
votes
1
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896
views
Comment:
Comment: How to rearrange fasta headers
24 months ago by
v.berriosfarias
▴ 140
0
votes
0
replies
1.0k
views
Comment:
Comment: retrieving paired end sequencing data with fasts-dump
2.0 years ago by
v.berriosfarias
▴ 140
0
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0
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1.0k
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Comment:
Comment: retrieving paired end sequencing data with fasts-dump
2.0 years ago by
v.berriosfarias
▴ 140
0
votes
0
replies
1.4k
views
Comment:
Comment: how to create a custom database (GTDB) ?
2.2 years ago by
v.berriosfarias
▴ 140
0
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1
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1.5k
views
Comment:
Comment: How to add taxonomic information for each fasta header ?
updated 2.4 years ago by
shenwei356
8.5k • written 2.4 years ago by
v.berriosfarias
▴ 140
0
votes
0
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3.7k
views
Comment:
Comment: Difference between a bin and a MAG
2.4 years ago by
v.berriosfarias
▴ 140
0
votes
1
reply
3.7k
views
Comment:
Comment: Difference between a bin and a MAG
2.4 years ago by
v.berriosfarias
▴ 140
0
votes
0
replies
1.7k
views
Comment:
Comment: parsing gbk files (antismash result)
2.7 years ago by
v.berriosfarias
▴ 140
0
votes
0
replies
1.7k
views
Comment:
Comment: how to remove a substring for multiple file names?
2.8 years ago by
v.berriosfarias
▴ 140
0
votes
1
reply
2.6k
views
Comment:
Comment: distance matrix as input in R clustering functions ?
2.9 years ago by
v.berriosfarias
▴ 140
0
votes
0
replies
763
views
Comment:
Comment: Viral taxonomic classification question
2.9 years ago by
v.berriosfarias
▴ 140
0
votes
1
reply
4.1k
views
Comment:
Comment: How to cat 2 paired end reads files together in one file using loops for multip
3.0 years ago by
v.berriosfarias
▴ 140
0
votes
1
reply
4.1k
views
Comment:
Comment: How to cat 2 paired end reads files together in one file using loops for multip
3.0 years ago by
v.berriosfarias
▴ 140
0
votes
0
replies
1.3k
views
Comment:
Comment: making a PCA from MASH distance result
3.1 years ago by
v.berriosfarias
▴ 140
0
votes
1
reply
12k
views
Comment:
Comment: Installing perl modules on a conda environment produce changes out of the enviro
3.1 years ago by
v.berriosfarias
▴ 140
0
votes
0
replies
1.6k
views
Comment:
Comment: Tools for hard trimming?
3.1 years ago by
v.berriosfarias
▴ 140
0
votes
2
replies
3.2k
views
Comment:
Comment: How to extract sequences from fasta that have a certain length ?
3.1 years ago by
v.berriosfarias
▴ 140
0
votes
0
replies
1.4k
views
Comment:
Comment: BAM file's reference sequence IDs doesnt match contigs ID's
3.1 years ago by
v.berriosfarias
▴ 140
0
votes
1
reply
1.4k
views
Comment:
Comment: BAM file's reference sequence IDs doesnt match contigs ID's
3.1 years ago by
v.berriosfarias
▴ 140
0
votes
0
replies
1.3k
views
Comment:
Comment: K-mer usage in metagenome assemblies
3.1 years ago by
v.berriosfarias
▴ 140
0
votes
2
replies
1.6k
views
Comment:
C: Filter contigs by size: Different output between quast report and python output
3.2 years ago by
v.berriosfarias
▴ 140
0
votes
1
reply
1.6k
views
Comment:
C: Filter contigs by size: Different output between quast report and python output
3.2 years ago by
v.berriosfarias
▴ 140
0
votes
1
reply
5.5k
views
Comment:
C: How to extract a sequence below a fasta header (">") from a fasta file ?
3.3 years ago by
v.berriosfarias
▴ 140
0
votes
1
reply
5.5k
views
Comment:
C: How to extract a sequence below a fasta header (">") from a fasta file ?
3.3 years ago by
v.berriosfarias
▴ 140
0
votes
0
replies
5.5k
views
Comment:
C: How to extract a sequence below a fasta header (">") from a fasta file ?
3.3 years ago by
v.berriosfarias
▴ 140
0
votes
0
replies
2.9k
views
Comment:
A: Is it possible to work with paired-end reads for assembly purposes using metaspa
3.4 years ago by
v.berriosfarias
▴ 140
0
votes
1
reply
1.6k
views
Comment:
C: Tools for hard trimming?
3.5 years ago by
v.berriosfarias
▴ 140
0
votes
0
replies
2.0k
views
Comment:
C: which sequence adapter trimming tool should i use for my illumina 101pb reads ?
3.5 years ago by
v.berriosfarias
▴ 140
0
votes
0
replies
956
views
Comment:
C: bowtie2 giving 0% alignment rato across all samples
3.5 years ago by
v.berriosfarias
▴ 140
0
votes
1
reply
956
views
Comment:
C: bowtie2 giving 0% alignment rato across all samples
3.5 years ago by
v.berriosfarias
▴ 140
0
votes
0
replies
956
views
Comment:
C: bowtie2 giving 0% alignment rato across all samples
3.5 years ago by
v.berriosfarias
▴ 140
0
votes
1
reply
4.6k
views
Comment:
C: bowtie2 using loop on bash with paired-ended reads
3.6 years ago by
v.berriosfarias
▴ 140
0
votes
1
reply
4.6k
views
Comment:
C: bowtie2 using loop on bash with paired-ended reads
3.6 years ago by
v.berriosfarias
▴ 140
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