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Comment: C: log transformation of rpkm
7.1 years ago by Charles Warden 8.3k
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10k
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Answer: A: log transformation of rpkm
7.1 years ago by Charles Warden 8.3k
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20k
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Answer: A: How to use own genome file in IGV?
7.1 years ago by Charles Warden 8.3k
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1
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1.8k
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Answer: A: Are Clariom D arrays simply renamed HTA-3.0 arrays?
7.1 years ago by Charles Warden 8.3k
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2.4k
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Comment: C: How to run eXpress RNA-seq quantification?
7.1 years ago by Charles Warden 8.3k
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1
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4.8k
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Comment: C: Reading methylation without IDAT files downloaded from GEO
7.1 years ago by Charles Warden 8.3k
3
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1
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4.8k
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Answer: A: Reading methylation without IDAT files downloaded from GEO
7.1 years ago by Charles Warden 8.3k
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1
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2.4k
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Comment: C: How to run eXpress RNA-seq quantification?
7.1 years ago by Charles Warden 8.3k
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0
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12k
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Comment: C: motif search with ATACseq
7.1 years ago by Charles Warden 8.3k
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1
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12k
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Comment: C: motif search with ATACseq
7.1 years ago by Charles Warden 8.3k
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0
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3.6k
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Answer: A: BWA or STAR for microbiome 16s multiple sequence alignment?
7.1 years ago by Charles Warden 8.3k
2
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2.0k
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Answer: A: Using Bioconductor package for gene expression analysis
7.1 years ago by Charles Warden 8.3k
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1
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12k
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Answer: A: motif search with ATACseq
7.1 years ago by Charles Warden 8.3k
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0
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5.8k
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Answer: A: How can I find motifs under individual ATAC-peaks?
7.1 years ago by Charles Warden 8.3k
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2.1k
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Comment: C: Finding Correlation between methylation and RNA-Seq data and their significance
7.1 years ago by Charles Warden 8.3k
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0
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3.3k
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Comment: C: Sanity check: DESeq2 analysis of RNAseq data gives atypical plots
7.1 years ago by Charles Warden 8.3k
2
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1
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2.1k
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Answer: A: Finding Correlation between methylation and RNA-Seq data and their significance
7.1 years ago by Charles Warden 8.3k
1
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1
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3.3k
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Answer: A: Sanity check: DESeq2 analysis of RNAseq data gives atypical plots
7.1 years ago by Charles Warden 8.3k
3
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3.3k
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Answer: A: RNAseq computer source for TopHat and Cufflinks
7.1 years ago by Charles Warden 8.3k
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0
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3.8k
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Comment: C: RNA-seq analysis of two species
7.1 years ago by Charles Warden 8.3k
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2
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3.8k
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Answer: A: RNA-seq analysis of two species
7.1 years ago by Charles Warden 8.3k
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0
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2.4k
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Comment: C: RNA-Seq for FFPE samples
7.1 years ago by Charles Warden 8.3k
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0
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2.1k
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Comment: C: Abundance/frequency of RNASeq raw reads mapped to a transcript exon
7.1 years ago by Charles Warden 8.3k
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0
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7.9k
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Comment: C: gene expression analysis using RNA seq data
7.1 years ago by Charles Warden 8.3k
1
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1
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7.9k
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Comment: C: gene expression analysis using RNA seq data
7.1 years ago by Charles Warden 8.3k
0
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1
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2.4k
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Answer: A: RNA-Seq for FFPE samples
7.1 years ago by Charles Warden 8.3k
1
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0
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1.9k
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Answer: A: Pipeline for trusight RNA fusion kit
7.1 years ago by Charles Warden 8.3k
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1
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2.1k
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Comment: C: Abundance/frequency of RNASeq raw reads mapped to a transcript exon
7.1 years ago by Charles Warden 8.3k
1
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0
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1.7k
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Comment: C: In RNA Seq, How does the AT content help us to know if the data is contaminated
7.1 years ago by Charles Warden 8.3k
2
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0
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23k
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Answer: A: How different is rlog transformation from vst transformation in DESeq2
7.2 years ago by Charles Warden 8.3k
0
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1
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1.7k
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Comment: C: In RNA Seq, How does the AT content help us to know if the data is contaminated
7.2 years ago by Charles Warden 8.3k
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0
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7.4k
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Comment: C: Filtering in RNA-Seq to get Differentially Expressed lncRNA
7.2 years ago by Charles Warden 8.3k
2
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1
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3.3k
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Answer: A: Performing differential expression study on isoforms
7.2 years ago by Charles Warden 8.3k
1
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0
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2.4k
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Answer: A: Difference between DESEq2 and ANCOM for estimating biomarkers (which is preferrr
7.2 years ago by Charles Warden 8.3k
1
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1
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7.4k
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Answer: A: Filtering in RNA-Seq to get Differentially Expressed lncRNA
7.2 years ago by Charles Warden 8.3k
1
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0
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7.0k
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Answer: A: Single Cell RNAseq Imputation in Seurat
7.2 years ago by Charles Warden 8.3k
1
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1
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1.7k
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Answer: A: In RNA Seq, How does the AT content help us to know if the data is contaminated
7.2 years ago by Charles Warden 8.3k
1
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2
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3.0k
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Comment: C: GLM to predict what SNP influences DNA-methylation
7.2 years ago by Charles Warden 8.3k
1
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0
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1.7k
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Comment: C: About aligment in RNASeq analysis
7.2 years ago by Charles Warden 8.3k
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0
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1.8k
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Answer: A: What is common source of DNA- methylation raw data read files?
7.2 years ago by Charles Warden 8.3k
1
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1
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3.9k
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Answer: A: Reading Affymetrix data from pd.hugene.2.0.st using oligo for RNA degradation pl
updated 7.2 years ago by 45k • written 9.7 years ago by 8.3k
2
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1
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13k
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Answer: A: the best combine score for enrichment analysis from Enrichr
7.2 years ago by Charles Warden 8.3k
2
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0
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21k
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Answer: A: why PCA for RNA-Seq but tSNE for scRNA-seq?
7.2 years ago by Charles Warden 8.3k
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0
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4.6k
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Answer: A: Differential expression with MAST using scran-normalized data
7.2 years ago by Charles Warden 8.3k
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0
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3.1k
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Answer: A: Why no SINEs, LINEs, LTR and DNA elements were found by Repeatmasker
7.2 years ago by Charles Warden 8.3k
2
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0
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4.1k
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Answer: A: Difference between differential transcript expression and differential splicing
7.2 years ago by Charles Warden 8.3k
2
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0
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2.7k
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Answer: A: GSEA top genes vs all platform
7.3 years ago by Charles Warden 8.3k
2
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0
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4.0k
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Answer: A: mRNA-seq quality report (fastQC): Does it mean samples have adapters and should
7.4 years ago by Charles Warden 8.3k
0
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0
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3.6k
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Answer: A: calculating the fpkm from htseq counts
7.4 years ago by Charles Warden 8.3k
0
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1
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3.1k
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Answer: A: For Mean Expression/FC Calculations in scRNA-seq, should I use All cells or only
7.5 years ago by Charles Warden 8.3k
1,057 results • Page 10 of 22
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