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7
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8
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2.3k
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Forum: Guidelines / Limits for Shared Bioinformatics Support
Core Shared-Resources Collaboration
updated 2.4 years ago by 45k • written 5.9 years ago by 8.3k
3
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0
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4.8k
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Answer: A: Interesting things to do with 23andme data
5.9 years ago by Charles Warden 8.3k
2
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0
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1.1k
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Answer: A: Which is the best dna kit in the us market
6.0 years ago by Charles Warden 8.3k
0
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0
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2.8k
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Comment: C: How to phase my own 23andMe data ?
6.0 years ago by Charles Warden 8.3k
4
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2
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2.8k
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Answer: A: How to phase my own 23andMe data ?
6.0 years ago by Charles Warden 8.3k
1
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0
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2.6k
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Answer: A: RNA-seq Differential expression analysis show no differentially expressed genes
6.0 years ago by Charles Warden 8.3k
0
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0
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19k
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Answer: A: Is there an R package that pulls up gene functional annotations with gene symbol
6.0 years ago by Charles Warden 8.3k
1
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0
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1.1k
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Controlled Access Database for Human Samples Collected after 1/25/2015 (without informed consent for genomic data deposit)?
GDS informed consent data deposit dbGaP EGA
6.0 years ago by Charles Warden 8.3k
0
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0
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1.5k
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Answer: A: Machine learning using microarray data
6.0 years ago by Charles Warden 8.3k
2
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1
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5.6k
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Comment: C: Drug resistant vs. Drug sensitive data retreival from TCGA
6.0 years ago by Charles Warden 8.3k
2
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0
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923
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Answer: A: Possible Ideas for Citizen Science Project
6.0 years ago by Charles Warden 8.3k
0
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0
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6.4k
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Comment: C: How to automate bcl2fastq such that it is launched every time the run finishes o
6.0 years ago by Charles Warden 8.3k
0
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1
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6.4k
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Comment: A: How to automate bcl2fastq such that it is launched every time the run finishes o
6.0 years ago by Charles Warden 8.3k
2
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1
reply
3.3k
views
Answer: A: Different number of peaks between biological replicates?
6.0 years ago by Charles Warden 8.3k
0
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0
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6.7k
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Comment: C: edgeR gives no DE genes <0.05 FDR
6.1 years ago by Charles Warden 8.3k
0
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1
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11k
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Comment: C: Calling Single-Barcode Samples from Mixed Runs as Dual-Barcode Samples | Possibl
6.1 years ago by Charles Warden 8.3k
0
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1
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11k
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Comment: C: Calling Single-Barcode Samples from Mixed Runs as Dual-Barcode Samples | Possibl
6.1 years ago by Charles Warden 8.3k
2
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0
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4.8k
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Answer: Answer: Infinium/Illumina 450K methylation array data analysis: How to compare the vario
updated 3.6 years ago by 45k • written 10.8 years ago by 8.3k
1
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0
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139k
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Answer: Answer: Is There A Free Alternative To Ingenuity Pathway Analysis?
updated 3.6 years ago by 45k • written 10.8 years ago by 8.3k
2
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0
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19k
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Comment: Comment: What tools you use or know for PacBio Long Read error correction?
updated 4.6 years ago by 45k • written 10.8 years ago by 8.3k
4
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1
reply
19k
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Answer: Answer: What tools you use or know for PacBio Long Read error correction?
updated 4.6 years ago by 45k • written 10.8 years ago by 8.3k
4
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1
reply
6.0k
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Answer: A: Statistical test for DMR annotation?
updated 6.1 years ago by 45k • written 10.9 years ago by 8.3k
1
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0
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3.5k
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Answer: A: Estimate alternative splicing rate using RNA-Seq
updated 6.1 years ago by 45k • written 11.1 years ago by 8.3k
0
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0
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2.5k
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Comment: C: Does Abyss work on single-end Illumina reads only?
6.1 years ago by Charles Warden 8.3k
2
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1
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6.7k
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Answer: A: edgeR gives no DE genes <0.05 FDR
6.1 years ago by Charles Warden 8.3k
0
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0
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2.4k
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Comment: C: 450k methylation array - 2 raw intensity values for same probe
6.1 years ago by Charles Warden 8.3k
0
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1
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2.4k
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Comment: C: 450k methylation array - 2 raw intensity values for same probe
6.1 years ago by Charles Warden 8.3k
0
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1
reply
2.4k
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Answer: A: 450k methylation array - 2 raw intensity values for same probe
6.1 years ago by Charles Warden 8.3k
0
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1
reply
2.5k
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Answer: A: Does Abyss work on single-end Illumina reads only?
6.1 years ago by Charles Warden 8.3k
0
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0
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2.5k
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Comment: C: Does Abyss work on single-end Illumina reads only?
6.1 years ago by Charles Warden 8.3k
0
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0
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4.5k
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Comment: C: Varscan somatic error
updated 6.1 years ago by 45k • written 11.2 years ago by 8.3k
1
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1
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7.2k
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Answer: A: Small CNV calling (exome deletions and insertions)
updated 6.1 years ago by 45k • written 11.3 years ago by 8.3k
0
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1
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5.8k
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Comment: Comment: How can I use SNPeff with this genome?
updated 4.0 years ago by 45k • written 11.4 years ago by 8.3k
0
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1
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5.8k
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Answer: A: How can I use SNPeff with this genome?
updated 6.1 years ago by 45k • written 11.4 years ago by 8.3k
4
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2
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6.3k
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Answer: A: alternative splicing analysis
updated 6.1 years ago by 45k • written 11.4 years ago by 8.3k
1
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0
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4.7k
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Answer: A: Differential expression level of different exons from RNA-seq indicates what?
updated 6.1 years ago by 45k • written 11.4 years ago by 8.3k
0
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0
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4.8k
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Comment: C: How to define a full-length transcript for transcriptome assembly?
updated 6.1 years ago by 45k • written 11.4 years ago by 8.3k
1
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1
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7.2k
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Answer: A: RNA-seq analysis for Ion Proton Transcriptome data - tophat2 error
updated 6.1 years ago by 45k • written 11.4 years ago by 8.3k
0
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1
reply
5.1k
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Comment: C: Best Cnv Software?
updated 6.1 years ago by 45k • written 11.4 years ago by 8.3k
0
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1
reply
6.7k
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Comment: C: how to combine methylation information from different platform?
updated 6.1 years ago by 45k • written 11.5 years ago by 8.3k
1
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0
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16k
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Answer: A: What is the best programming language for NGS data analysis pipeline development
updated 6.1 years ago by 45k • written 11.5 years ago by 8.3k
3
votes
1
reply
5.6k
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Answer: A: TCGAs Methylation Data Annotation
updated 6.1 years ago by 45k • written 11.6 years ago by 8.3k
3
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1
reply
5.2k
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Answer: A: Methods or packages for identifying differential splicing
updated 6.1 years ago by 45k • written 11.6 years ago by 8.3k
0
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1
reply
8.2k
views
Comment: C: Bwa And Bwa Mem Produce Different Alignments
updated 6.1 years ago by 45k • written 11.7 years ago by 8.3k
0
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1
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8.2k
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Answer: A: Bwa And Bwa Mem Produce Different Alignments
updated 6.1 years ago by 45k • written 11.7 years ago by 8.3k
0
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0
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3.9k
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Comment: C: Solid And Hiseq
6.1 years ago by Charles Warden 8.3k
1
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0
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6.2k
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Comment: C: SLURM on Mac OS
6.1 years ago by Charles Warden 8.3k
0
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0
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1.4k
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Answer: A: How to normalise RNA-sequencing data that only consists of coverage for around 2
6.1 years ago by Charles Warden 8.3k
0
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0
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1.8k
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Answer: A: Can the gtf file needed to run rMATS be a transcript assembled by cufflinks and
6.1 years ago by Charles Warden 8.3k
0
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0
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11k
views
Comment: C: Calling Single-Barcode Samples from Mixed Runs as Dual-Barcode Samples | Possibl
6.1 years ago by Charles Warden 8.3k
1,057 results • Page 3 of 22
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