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0
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3.7k
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Comment: C: Too many unmapped reads - STAR alignment
3.3 years ago by DareDevil ★ 4.3k
1
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0
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2.7k
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Comment: C: Should I use Z-score standardization or Min-Max scaling in biological data ?
3.3 years ago by DareDevil ★ 4.3k
0
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0
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3.0k
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Comment: C: Is it possible to run haplotypecaller in gnu parallel ?
3.3 years ago by DareDevil ★ 4.3k
2
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0
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3.0k
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Answer: A: Is it possible to run haplotypecaller in gnu parallel ?
3.3 years ago by DareDevil ★ 4.3k
0
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0
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3.0k
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Comment: C: Is it possible to run haplotypecaller in gnu parallel ?
3.3 years ago by DareDevil ★ 4.3k
16
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15
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3.0k
views
Is it possible to run haplotypecaller in gnu parallel ?
gnu parallel HaplotypeCaller parallel gatk
3.3 years ago by DareDevil ★ 4.3k
0
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0
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3.0k
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Comment: C: Is it possible to run haplotypecaller in gnu parallel ?
3.3 years ago by DareDevil ★ 4.3k
0
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2
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3.0k
views
Comment: C: Is it possible to run haplotypecaller in gnu parallel ?
3.3 years ago by DareDevil ★ 4.3k
0
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0
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3.0k
views
Comment: C: Is it possible to run haplotypecaller in gnu parallel ?
3.3 years ago by DareDevil ★ 4.3k
0
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0
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1.0k
views
Comment: C: How is allelle frequency calculated ?
3.3 years ago by DareDevil ★ 4.3k
0
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1
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1.0k
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Comment: C: How is allelle frequency calculated ?
3.3 years ago by DareDevil ★ 4.3k
0
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1
reply
725
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Comment: C: Regarding Liftover and results
3.3 years ago by DareDevil ★ 4.3k
0
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1
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1.0k
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Comment: C: How is allelle frequency calculated ?
3.3 years ago by DareDevil ★ 4.3k
3
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6
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1.0k
views
How is allelle frequency calculated ?
vcf allelle frequency exome
updated 3.3 years ago by 161k • written 3.3 years ago by ★ 4.3k
10
votes
1
reply
818
views
Calling triovariants using varscan from a compressed mileup file ?
varscan samtools trio mpileup pipe
updated 3.3 years ago by ▴ 680 • written 3.3 years ago by ★ 4.3k
1
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0
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2.6k
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Comment: C: Is anybody experiencing problems downloading from the SRA?
3.3 years ago by DareDevil ★ 4.3k
5
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0
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1.2k
views
Answer: A: how to unique a file row-wise?
3.3 years ago by DareDevil ★ 4.3k
2
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1
reply
1.8k
views
Comment: C: Recalibrating variants in GATK4.1 as compared to GATK3.7
3.3 years ago by DareDevil ★ 4.3k
8
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1
reply
1.8k
views
Answer: A: Recalibrating variants in GATK4.1 as compared to GATK3.7
3.3 years ago by DareDevil ★ 4.3k
2
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0
replies
2.1k
views
Answer: A: How to delete a node row in the node table in cytoscape
3.3 years ago by DareDevil ★ 4.3k
1
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0
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1.7k
views
Comment: C: What is dbsnp file and how can I find it?
3.3 years ago by DareDevil ★ 4.3k
19
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5
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2.2k
views
Qualimap: java.lang.RuntimeException: The raw data doesn't exist for sample ?
qualimap bamqc multi-bamqc
3.3 years ago by DareDevil ★ 4.3k
6
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0
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2.2k
views
Answer: A: Qualimap: java.lang.RuntimeException: The raw data doesn't exist for sample ?
3.3 years ago by DareDevil ★ 4.3k
8
votes
1
reply
1.2k
views
CalculateGenotypePosteriors: A USER ERROR has occurred: Invalid argument ' '.
CalculateGenotypePosteriors gatk trio ped
3.3 years ago by DareDevil ★ 4.3k
2
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0
replies
6.2k
views
Comment: C: Combine two VCF files with GATK4
3.3 years ago by DareDevil ★ 4.3k
4
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1
reply
6.2k
views
Answer: A: Combine two VCF files with GATK4
3.3 years ago by DareDevil ★ 4.3k
5
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2
replies
4.9k
views
Answer: A: GATK4 VariantRecalibrator resource error
3.3 years ago by DareDevil ★ 4.3k
1
vote
1
reply
1.4k
views
Comment: C: How to pipe samtools mileup with varscan trio caller?
3.3 years ago by DareDevil ★ 4.3k
0
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0
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1.4k
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Comment: C: How to pipe samtools mileup with varscan trio caller?
3.3 years ago by DareDevil ★ 4.3k
1
vote
2
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2.8k
views
Comment: C: How to call denovo and rare variants from a trios cohort?
3.3 years ago by DareDevil ★ 4.3k
2
votes
0
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2.2k
views
Comment: C: Qualimap: java.lang.RuntimeException: The raw data doesn't exist for sample ?
3.3 years ago by DareDevil ★ 4.3k
10
votes
4
replies
1.4k
views
How to pipe samtools mileup with varscan trio caller?
varscan samtools pipe
3.3 years ago by DareDevil ★ 4.3k
0
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0
replies
2.1k
views
Comment: C: Is this a good workflow to find denovo mutations in trios?
3.3 years ago by DareDevil ★ 4.3k
0
votes
1
reply
2.8k
views
Comment: C: How to call denovo and rare variants from a trios cohort?
3.3 years ago by DareDevil ★ 4.3k
0
votes
1
reply
2.2k
views
Comment: C: Qualimap: java.lang.RuntimeException: The raw data doesn't exist for sample ?
3.3 years ago by DareDevil ★ 4.3k
1
vote
0
replies
33k
views
Comment: C: Star Or Tophat?
3.3 years ago by DareDevil ★ 4.3k
0
votes
0
replies
915
views
Comment: C: Extracting amino acid positions from a fasta sequence
3.3 years ago by DareDevil ★ 4.3k
1
vote
0
replies
8.0k
views
Comment: C: Scaled gene expression data and produced negative value
3.3 years ago by DareDevil ★ 4.3k
3
votes
0
replies
8.0k
views
Comment: C: Scaled gene expression data and produced negative value
3.3 years ago by DareDevil ★ 4.3k
1
vote
0
replies
1.9k
views
Comment: C: Expected a file with 2 fields per line. GenomicsDBImport from GATK ?
3.3 years ago by DareDevil ★ 4.3k
2
votes
0
replies
1.9k
views
Comment: C: Expected a file with 2 fields per line. GenomicsDBImport from GATK ?
3.3 years ago by DareDevil ★ 4.3k
10
votes
4
replies
1.9k
views
Expected a file with 2 fields per line. GenomicsDBImport from GATK ?
GenomicsDBImport GATK trio cohort
3.3 years ago by DareDevil ★ 4.3k
0
votes
1
reply
930
views
Comment: C: How to call denovo variants from multiple trios cohort?
3.3 years ago by DareDevil ★ 4.3k
0
votes
0
replies
930
views
Comment: C: How to call denovo variants from multiple trios cohort?
3.3 years ago by DareDevil ★ 4.3k
2
votes
4
replies
930
views
How to call denovo variants from multiple trios cohort?
trio denovo gatk germline
updated 3.3 years ago by 161k • written 3.3 years ago by ★ 4.3k
2
votes
0
replies
1.4k
views
Comment: C: How can I normalize RPKM data from TCGA (pan-cancer analysis)?
3.3 years ago by DareDevil ★ 4.3k
1
vote
0
replies
1.5k
views
Comment: C: Access metadata in GEO expression datasets
3.3 years ago by DareDevil ★ 4.3k
2
votes
0
replies
1.5k
views
Comment: C: Access metadata in GEO expression datasets
3.3 years ago by DareDevil ★ 4.3k
3
votes
0
replies
1.4k
views
Comment: C: How can I normalize RPKM data from TCGA (pan-cancer analysis)?
3.3 years ago by DareDevil ★ 4.3k
0
votes
1
reply
1.4k
views
Comment: C: How can I normalize RPKM data from TCGA (pan-cancer analysis)?
3.3 years ago by DareDevil ★ 4.3k
224 results • Page 4 of 5
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