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Comment: Comment: Heatmap Annotation in R
3 months ago by bkleiboeker ▴ 370
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454
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Comment: Comment: DESEQ2 analysis - PCA plot
3 months ago by bkleiboeker ▴ 370
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1
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333
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Comment: Comment: CombatSeq on a large dataset before running DSeq2 on a very small subset?
3 months ago by bkleiboeker ▴ 370
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921
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Comment: Comment: subset data problem
4 months ago by bkleiboeker ▴ 370
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1
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921
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Comment: Comment: subset data problem
4 months ago by bkleiboeker ▴ 370
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1
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777
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Comment: Comment: How to filter gene counts by keeping genes that have a count of of 10 or more in
4 months ago by bkleiboeker ▴ 370
1
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1
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777
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Answer: Answer: How to filter gene counts by keeps genes that have a gene count of of 10 or more
4 months ago by bkleiboeker ▴ 370
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949
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Comment: Comment: Help speeding up C++ algorithm to assign elemental composition to single m/z (=m
4 months ago by bkleiboeker ▴ 370
7
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7
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949
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Help speeding up C++ algorithm to assign elemental composition to single m/z (=mass) value
Cpp Rcpp spectrometry mass
4 months ago by bkleiboeker ▴ 370
3
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1
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949
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Answer: Answer: Help speeding up C++ algorithm to assign elemental composition to single m/z (=m
4 months ago by bkleiboeker ▴ 370
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1
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949
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Comment: Comment: Help speeding up C++ algorithm to assign elemental composition to single m/z (=m
6 months ago by bkleiboeker ▴ 370
0
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0
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949
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Comment: Comment: Help speeding up C++ algorithm to assign elemental composition to single m/z (=m
6 months ago by bkleiboeker ▴ 370
1
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404
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Comment: Comment: just one plot appears in the shiny application not all
8 months ago by bkleiboeker ▴ 370
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0
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393
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Comment: Comment: A problem about saving Rstudio data matrix
8 months ago by bkleiboeker ▴ 370
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1
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900
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Comment: Comment: Inclusion of R script in shiny application
8 months ago by bkleiboeker ▴ 370
2
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2
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900
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Answer: Answer: Inclusion of R script in shiny application
8 months ago by bkleiboeker ▴ 370
2
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0
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807
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Comment: Comment: Languages for Bioinformatics
8 months ago by bkleiboeker ▴ 370
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916
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Comment: Comment: how to use make.names commnad in r while using rbind function
8 months ago by bkleiboeker ▴ 370
2
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0
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630
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Answer: Answer: How to make line graph with circles in R
8 months ago by bkleiboeker ▴ 370
0
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1
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834
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Comment: Comment: Merge common elements in R
9 months ago by bkleiboeker ▴ 370
1
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1
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1.1k
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Comment: Comment: SVA vs limma model
9 months ago by bkleiboeker ▴ 370
2
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1
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1.1k
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Answer: Answer: SVA vs limma model
9 months ago by bkleiboeker ▴ 370
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1
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1.1k
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Comment: Comment: SVA vs limma model
9 months ago by bkleiboeker ▴ 370
3
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347
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Answer: Answer: Filtering column in R
9 months ago by bkleiboeker ▴ 370
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1
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641
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Comment: Comment: SRA toolkit
9 months ago by bkleiboeker ▴ 370
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0
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1.1k
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Comment: Comment: Modeling RNAseq batch effects using a non-case/control technical replicate
9 months ago by bkleiboeker ▴ 370
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0
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1.5k
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Comment: Comment: Limma for batch effect correction
9 months ago by bkleiboeker ▴ 370
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2
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1.1k
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Comment: Comment: Modeling RNAseq batch effects using a non-case/control technical replicate
9 months ago by bkleiboeker ▴ 370
0
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0
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348
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Answer: Answer: differential expression analysis
updated 9 months ago by 41k • written 9 months ago by ▴ 370
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1.5k
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Comment: Comment: Limma for batch effect correction
9 months ago by bkleiboeker ▴ 370
1
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0
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398
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Comment: Comment: Error while running survival analysis ?
9 months ago by bkleiboeker ▴ 370
1
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0
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362
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Comment: Comment: Limma contrasts for DEGs
9 months ago by bkleiboeker ▴ 370
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0
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670
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Answer: Answer: Why am I getting only one common value when comparing two excel files?
9 months ago by bkleiboeker ▴ 370
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0
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2.5k
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Comment: Comment: Heatmap by group in R
9 months ago by bkleiboeker ▴ 370
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1
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1.1k
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Answer: Answer: Export glm and manova results from R in a publishable table
9 months ago by bkleiboeker ▴ 370
0
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1
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811
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Comment: Comment: Saccharomyces cerevisiae - mapping against transcriptome
10 months ago by bkleiboeker ▴ 370
0
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0
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463
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Comment: Comment: Limma design matrix to find which interaction is significant
10 months ago by bkleiboeker ▴ 370
1
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1
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1.2k
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Comment: Comment: Proteomic Statistics - FDR vs p-value
10 months ago by bkleiboeker ▴ 370
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0
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1.1k
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Comment: Comment: R is assigning unique identifier to the same column names when reading in as a d
10 months ago by bkleiboeker ▴ 370
0
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0
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648
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Answer: Answer: CompleX heat Map
updated 10 months ago by 41k • written 10 months ago by ▴ 370
2
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1
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1.1k
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Comment: Comment: Use tximport to merge and transform the transcript counts to gene counts
10 months ago by bkleiboeker ▴ 370
4
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1
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1.1k
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Answer: Answer: Use tximport to merge and transform the transcript counts to gene counts
10 months ago by bkleiboeker ▴ 370
0
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0
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626
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Comment: Comment: What can I do with pan-cancer RNA-seq data that only has FPKM value?
10 months ago by bkleiboeker ▴ 370
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0
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874
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Comment: Comment: Pan-cancer RNA-seq data normalization
10 months ago by bkleiboeker ▴ 370
3
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0
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1.4k
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Comment: Comment: R programmin RNA seq
10 months ago by bkleiboeker ▴ 370
0
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0
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567
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Comment: Comment: using published genomic data
11 months ago by bkleiboeker ▴ 370
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0
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1.2k
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Comment: Comment: How do I subset data in R with a list of variable names?
11 months ago by bkleiboeker ▴ 370
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0
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1.2k
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Comment: Comment: How do I subset data in R with a list of variable names?
11 months ago by bkleiboeker ▴ 370
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0
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1.6k
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Comment: Comment: How to make contrasts to find genes DE in one experimental group but NOT in othe
11 months ago by bkleiboeker ▴ 370
0
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1
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1.6k
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Comment: Comment: How to make contrasts to find genes DE in one experimental group but NOT in othe
11 months ago by bkleiboeker ▴ 370
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