Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : comments
0
votes
1
reply
5.5k
views
Comment: C: Calculating isoforms abundance using RNAseq data
updated 5.3 years ago by 45k • written 10.2 years ago by ★ 2.2k
1
vote
1
reply
9.4k
views
Comment: C: Cuffmerge running error
updated 5.4 years ago by 45k • written 10.3 years ago by ★ 2.2k
1
vote
1
reply
9.4k
views
Comment: C: Cuffmerge running error
updated 5.4 years ago by 45k • written 10.3 years ago by ★ 2.2k
1
vote
1
reply
9.4k
views
Comment: C: Cuffmerge running error
updated 5.4 years ago by 45k • written 10.4 years ago by ★ 2.2k
0
votes
2
replies
16k
views
Comment: C: Easiest way to compute RNA-Seq mapping stats (exons, introns, intergenic)?
updated 5.4 years ago by 45k • written 10.1 years ago by ★ 2.2k
0
votes
0
replies
5.7k
views
Comment: C: Convert A Psl File To A Sam File And Also Write Sequences To The Sam File?
updated 5.4 years ago by 45k • written 10.4 years ago by ★ 2.2k
0
votes
0
replies
7.0k
views
Comment: C: Trinity works on my PC
updated 5.4 years ago by 45k • written 10.5 years ago by ★ 2.2k
0
votes
1
reply
32k
views
Comment: C: convert FASTA into FASTQ using linux
updated 6.3 years ago by 45k • written 10.4 years ago by ★ 2.2k
0
votes
0
replies
3.3k
views
Comment: C: Gene lists and calculated Ka/Ks ratio per gene
7.7 years ago by Manvendra Singh ★ 2.2k
1
vote
0
replies
2.1k
views
Comment: C: Any tools to detect lncRNAs from RNA-seq data?
8.1 years ago by Manvendra Singh ★ 2.2k
0
votes
1
reply
3.9k
views
Comment: C: Overrepresented sequence in RNA-seq only in R2
8.4 years ago by Manvendra Singh ★ 2.2k
0
votes
0
replies
5.5k
views
Comment: Comment: Comparing gene expression profiles between species
updated 3.0 years ago by 45k • written 8.6 years ago by ★ 2.2k
0
votes
1
reply
7.2k
views
Comment: Comment: Endogenous Retrovirus Expression from RNA-Seq
updated 3.0 years ago by 45k • written 10.2 years ago by ★ 2.2k
0
votes
0
replies
17k
views
Comment: C: GO analysis- analyze upregulated and downregulated genes separately?
9.6 years ago by Manvendra Singh ★ 2.2k
0
votes
1
reply
5.6k
views
Comment: Comment: Why is DESeq a better method for finding highly upregulated and downregulated ge
updated 2.4 years ago by 45k • written 9.6 years ago by ★ 2.2k
0
votes
0
replies
5.6k
views
Comment: C: Why is DESeq a better method for finding highly upregulated and downregulated ge
9.6 years ago by Manvendra Singh ★ 2.2k
0
votes
0
replies
5.6k
views
Comment: C: Why is DESeq a better method for finding highly upregulated and downregulated ge
9.6 years ago by Manvendra Singh ★ 2.2k
0
votes
1
reply
5.2k
views
Comment: C: Differential expression analysis using Limma (Not on cel files)
9.7 years ago by Manvendra Singh ★ 2.2k
0
votes
0
replies
3.9k
views
Comment: C: ChIP-Seq contaminated by human tissue?
9.7 years ago by Manvendra Singh ★ 2.2k
0
votes
0
replies
2.5k
views
Comment: C: Batch Retrieval of Coding Sequences
9.8 years ago by Manvendra Singh ★ 2.2k
0
votes
1
reply
8.1k
views
Comment: C: Getting transcript annotation in BED format along with reference seq.
9.8 years ago by Manvendra Singh ★ 2.2k
0
votes
1
reply
8.1k
views
Comment: Comment: Getting transcript annotation in BED format along with reference seq.
updated 2.3 years ago by 45k • written 9.8 years ago by ★ 2.2k
1
vote
0
replies
3.2k
views
Comment: Comment: I need to know how to trimming RNAseq of GEO dataset.
updated 2.3 years ago by 45k • written 9.8 years ago by ★ 2.2k
1
vote
0
replies
2.9k
views
Comment: Comment: What is the best way to get help on Bioconductor packages?
updated 2.3 years ago by 45k • written 9.8 years ago by ★ 2.2k
0
votes
1
reply
2.9k
views
Comment: C: What is the best way to get help on Bioconductor packages?
9.8 years ago by Manvendra Singh ★ 2.2k
1
vote
0
replies
2.9k
views
Comment: Comment: Differentially expressed microRNA analysis using bowtie2-cufflink-cuffdiff
updated 2.3 years ago by 45k • written 9.8 years ago by ★ 2.2k
0
votes
0
replies
3.6k
views
Comment: C: p53 upregulated in cancer cell line
9.8 years ago by Manvendra Singh ★ 2.2k
1
vote
1
reply
5.0k
views
Comment: Comment: RNA-seq batch effect due to sequencing platform
updated 2.5 years ago by 45k • written 9.8 years ago by ★ 2.2k
0
votes
0
replies
2.7k
views
Comment: Comment: predicting protein binding regions within LncRNA
updated 2.7 years ago by 45k • written 9.9 years ago by ★ 2.2k
1
vote
1
reply
6.1k
views
Comment: C: tRNA expression analysis from RNA-Seq
9.9 years ago by Manvendra Singh ★ 2.2k
0
votes
0
replies
3.4k
views
Comment: Comment: Bam-files: How to know which reads are actual pairs?
updated 2.7 years ago by 45k • written 9.9 years ago by ★ 2.2k
0
votes
1
reply
3.4k
views
Comment: C: Bam-files: How to know which reads are actual pairs?
9.9 years ago by Manvendra Singh ★ 2.2k
1
vote
0
replies
2.5k
views
Comment: Comment: Microarray data analysis (median detection pvalue)
updated 2.7 years ago by 45k • written 9.9 years ago by ★ 2.2k
0
votes
1
reply
3.2k
views
Comment: Comment: merge PE reads for Transcript De-Novo Assembly ??
updated 2.8 years ago by 45k • written 10.0 years ago by ★ 2.2k
0
votes
0
replies
2.4k
views
Comment: Comment: corresponding gene names for probeIDs
updated 2.9 years ago by 45k • written 10.1 years ago by ★ 2.2k
1
vote
0
replies
3.8k
views
Comment: Comment: Analyse Illumina Microarray data with lumi - read in data
updated 2.9 years ago by 45k • written 10.1 years ago by ★ 2.2k
0
votes
1
reply
16k
views
Comment: C: Easiest way to compute RNA-Seq mapping stats (exons, introns, intergenic)?
10.1 years ago by Manvendra Singh ★ 2.2k
1
vote
0
replies
2.4k
views
Comment: C: Tophat option -p
10.1 years ago by Manvendra Singh ★ 2.2k
0
votes
0
replies
29k
views
Comment: Comment: How do I convert Affymetrix ID names to gene names
updated 2.9 years ago by 45k • written 10.1 years ago by ★ 2.2k
0
votes
1
reply
19k
views
Comment: Comment: Differential gene Analysis by Limma
updated 2.9 years ago by 45k • written 10.1 years ago by ★ 2.2k
0
votes
0
replies
19k
views
Comment: Comment: Differential gene Analysis by Limma
updated 2.9 years ago by 45k • written 10.1 years ago by ★ 2.2k
0
votes
0
replies
16k
views
Comment: Comment: HTSeq-count high number of no_feature
updated 2.9 years ago by 45k • written 10.1 years ago by ★ 2.2k
0
votes
1
reply
16k
views
Comment: C: HTSeq-count high number of no_feature
10.1 years ago by Manvendra Singh ★ 2.2k
0
votes
0
replies
2.3k
views
Comment: Comment: biological replicates analysis
updated 2.9 years ago by 45k • written 10.1 years ago by ★ 2.2k
0
votes
1
reply
2.3k
views
Comment: Comment: biological replicates analysis
updated 2.9 years ago by 45k • written 10.1 years ago by ★ 2.2k
0
votes
1
reply
1.7k
views
Comment: Comment: differentially expressed gene
updated 2.9 years ago by 45k • written 10.1 years ago by ★ 2.2k
0
votes
1
reply
2.6k
views
Comment: Comment: [solved] IGV browser: export feature coordinates to BED file does not work
updated 2.9 years ago by 45k • written 10.1 years ago by ★ 2.2k
0
votes
0
replies
14k
views
Comment: C: why cannot I load my data with numeric variables in R?
10.1 years ago by Manvendra Singh ★ 2.2k
0
votes
1
reply
14k
views
Comment: C: why cannot I load my data with numeric variables in R?
10.1 years ago by Manvendra Singh ★ 2.2k
0
votes
0
replies
11k
views
Comment: C: Normalising ChIP-seq data to RPM using a 1 or 2 count for paired-end data?
10.1 years ago by Manvendra Singh ★ 2.2k
238 results • Page 1 of 5
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6