Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
762
views
Job: Senior Bioinformatician - MRC LMS - London UK
nextflow docker
updated 2.8 years ago by 45k • written 3.0 years ago by ★ 1.2k
1
vote
0
replies
8.1k
views
Comment: Comment: How to trim ngs sequences according to the phred score using python/biopython
updated 2.5 years ago by 45k • written 11.3 years ago by ★ 1.2k
1
vote
1
reply
8.1k
views
Comment: Comment: How to trim ngs sequences according to the phred score using python/biopython
updated 2.5 years ago by 45k • written 11.4 years ago by ★ 1.2k
0
votes
1
reply
4.8k
views
Answer: A: RepeatMasker for Fungi
updated 5.8 years ago by 45k • written 9.7 years ago by ★ 1.2k
1
vote
1
reply
13k
views
Answer: A: extract columns from file based on header selected from 2nd file
updated 5.8 years ago by 45k • written 9.8 years ago by ★ 1.2k
0
votes
0
replies
13k
views
Comment: C: extract columns from file based on header selected from 2nd file
updated 5.8 years ago by 45k • written 9.8 years ago by ★ 1.2k
1
vote
0
replies
13k
views
Comment: C: Do bioinformaticians often break molecular biologists' hearts by being the first
updated 5.8 years ago by 45k • written 9.8 years ago by ★ 1.2k
11
votes
3
replies
13k
views
Answer: C: Do bioinformaticians often break molecular biologists' hearts by being the first
updated 5.8 years ago by 45k • written 9.8 years ago by ★ 1.2k
5
votes
1
reply
3.2k
views
Answer: A: Help for changing fasta seq ID
updated 5.8 years ago by 45k • written 9.8 years ago by ★ 1.2k
2
votes
1
reply
2.0k
views
Comment: C: <Data Munging> Convert Methylation Percentage to Number of Reads
updated 5.8 years ago by 45k • written 9.9 years ago by ★ 1.2k
0
votes
1
reply
19k
views
Comment: C: Subsample BAM to fixed number of alignments
updated 5.9 years ago by 45k • written 10.3 years ago by ★ 1.2k
0
votes
1
reply
6.6k
views
Comment: C: NaS (Nanopore Synthetic-long) help
updated 5.9 years ago by 45k • written 10.3 years ago by ★ 1.2k
1
vote
1
reply
22k
views
Comment: C: Counting mapped reads from a SAM file
updated 5.9 years ago by 45k • written 10.3 years ago by ★ 1.2k
0
votes
0
replies
3.4k
views
Answer: A: Remove rows based on duplicates in one column
updated 7.0 years ago by 45k • written 9.6 years ago by ★ 1.2k
0
votes
0
replies
2.6k
views
Answer: A: Does the number of paired reads have to be exactly the same in Platanus scaffold
updated 7.0 years ago by 45k • written 9.6 years ago by ★ 1.2k
5
votes
1
reply
6.7k
views
Answer: A: What is the actual cause of excessive zeroes in single cell RNA-seq data? Is it
7.9 years ago by george.ry ★ 1.2k
0
votes
0
replies
2.0k
views
Answer: A: problem in fetching data using excel
7.9 years ago by george.ry ★ 1.2k
1
vote
1
reply
6.4k
views
Comment: C: How do I generate all possible Newick Tree permutations for a set of species giv
7.9 years ago by george.ry ★ 1.2k
3
votes
1
reply
20k
views
Answer: A: Any alternative (free, open source tool) for Geneious software for phylogenetic
7.9 years ago by george.ry ★ 1.2k
1
vote
1
reply
6.4k
views
Comment: C: How do I generate all possible Newick Tree permutations for a set of species giv
7.9 years ago by george.ry ★ 1.2k
1
vote
1
reply
1.8k
views
Answer: A: Computing chunk of fasta file before moving to next chunks using python
8.0 years ago by george.ry ★ 1.2k
1
vote
1
reply
6.6k
views
Comment: C: How to Run the Script for Extracting Splice Sites from the Gene Annotation File
8.0 years ago by george.ry ★ 1.2k
0
votes
0
replies
4.4k
views
Comment: C: Print line based on partial match
8.0 years ago by george.ry ★ 1.2k
0
votes
0
replies
2.5k
views
Answer: A: frequency of each nucleotide at each position in sequence
8.0 years ago by george.ry ★ 1.2k
1
vote
1
reply
9.6k
views
Answer: A: Run a Python program in Ubuntu
8.7 years ago by george.ry ★ 1.2k
4
votes
1
reply
15k
views
Answer: A: Error while downloading data using SRA toolkit
8.7 years ago by george.ry ★ 1.2k
0
votes
1
reply
2.7k
views
Comment: C: Parse file to remove two characters from the ends of a lot of lines
8.7 years ago by george.ry ★ 1.2k
2
votes
1
reply
2.7k
views
Answer: A: Parse file to remove two characters from the ends of a lot of lines
8.7 years ago by george.ry ★ 1.2k
3
votes
0
replies
4.4k
views
Answer: A: How to draw a phylogenetic tree together with a genome locus structure?
8.9 years ago by george.ry ★ 1.2k
3
votes
1
reply
3.1k
views
Comment: C: Multiple Sequence Alignment tools
8.9 years ago by george.ry ★ 1.2k
1
vote
1
reply
3.0k
views
Comment: C: Annotation of repeatative elements
9.0 years ago by george.ry ★ 1.2k
3
votes
1
reply
6.6k
views
Answer: A: Split SAM file into smaller SAM files by line count
9.1 years ago by george.ry ★ 1.2k
2
votes
0
replies
12k
views
Comment: C: What is the future of EMBL-EBI (and European bioinformatics in general) in case
9.2 years ago by george.ry ★ 1.2k
0
votes
1
reply
18k
views
Comment: C: Retrieve a subset of FASTA from large multi-FASTA file
9.3 years ago by george.ry ★ 1.2k
3
votes
1
reply
9.9k
views
Comment: C: Extracting last N bases of reads in FASTQ file
9.4 years ago by george.ry ★ 1.2k
1
vote
1
reply
111k
views
Comment: C: Best Way To Merge A Many Thousand Small Bam Files Into One Big Bam File?
9.5 years ago by george.ry ★ 1.2k
1
vote
1
reply
111k
views
Comment: C: Best Way To Merge A Many Thousand Small Bam Files Into One Big Bam File?
9.5 years ago by george.ry ★ 1.2k
1
vote
0
replies
6.7k
views
Answer: A: Get sequence from aligned BAM file according to interval in BED file
9.5 years ago by george.ry ★ 1.2k
2
votes
0
replies
1.8k
views
Answer: Answer: Assemble small set of reads
updated 3.2 years ago by 45k • written 9.6 years ago by ★ 1.2k
0
votes
0
replies
5.2k
views
Comment: C: Installing Vicuna on Biolinux 8 - ncbi_tools++ make error
9.6 years ago by george.ry ★ 1.2k
1
vote
0
replies
7.4k
views
Answer: Answer: HISAT (Transcript Alignment) and StringTie (Transcript Assembly)
updated 3.2 years ago by 45k • written 9.6 years ago by ★ 1.2k
2
votes
1
reply
4.9k
views
Comment: C: Fastest way from SRA to fastq PE reads
9.6 years ago by george.ry ★ 1.2k
0
votes
1
reply
4.5k
views
Comment: C: Converting sra to fastq
9.9 years ago by george.ry ★ 1.2k
0
votes
0
replies
5.1k
views
Comment: C: what is the fastest way to sort big bam files? (300Gb)
10.0 years ago by george.ry ★ 1.2k
2
votes
1
reply
4.9k
views
Answer: A: Error with library("GEOquery") in R
10.1 years ago by george.ry ★ 1.2k
1
vote
1
reply
2.4k
views
Comment: Comment: find matching rows based on snp ids
updated 2.9 years ago by 45k • written 10.1 years ago by ★ 1.2k
1
vote
0
replies
2.4k
views
Comment: Comment: find matching rows based on snp ids
updated 2.9 years ago by 45k • written 10.1 years ago by ★ 1.2k
1
vote
0
replies
5.5k
views
Comment: Comment: desktop bioinformatics platform specs
updated 2.8 years ago by 45k • written 10.2 years ago by ★ 1.2k
0
votes
0
replies
11k
views
Answer: Answer: Coding genotypes from nucleotides to 0/1/2 in R.
updated 2.7 years ago by 45k • written 10.3 years ago by ★ 1.2k
1
vote
0
replies
6.7k
views
Comment: Comment: How to extract reads supporting protein-coding gene splice junctions from STAR's
updated 2.7 years ago by 45k • written 10.3 years ago by ★ 1.2k
94 results • Page 1 of 2
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6