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Job: Senior Bioinformatician - MRC LMS - London UK
nextflow docker
updated 2.1 years ago by 44k • written 2.3 years ago by ★ 1.2k
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Comment: Comment: How to trim ngs sequences according to the phred score using python/biopython
updated 22 months ago by 44k • written 10.7 years ago by ★ 1.2k
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Comment: Comment: How to trim ngs sequences according to the phred score using python/biopython
updated 22 months ago by 44k • written 10.7 years ago by ★ 1.2k
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Answer: A: RepeatMasker for Fungi
updated 5.1 years ago by 44k • written 9.0 years ago by ★ 1.2k
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1
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13k
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Answer: A: extract columns from file based on header selected from 2nd file
updated 5.1 years ago by 44k • written 9.2 years ago by ★ 1.2k
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Comment: C: extract columns from file based on header selected from 2nd file
updated 5.1 years ago by 44k • written 9.2 years ago by ★ 1.2k
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Comment: C: Do bioinformaticians often break molecular biologists' hearts by being the first
updated 5.1 years ago by 44k • written 9.2 years ago by ★ 1.2k
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Answer: C: Do bioinformaticians often break molecular biologists' hearts by being the first
updated 5.1 years ago by 44k • written 9.2 years ago by ★ 1.2k
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2.9k
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Answer: A: Help for changing fasta seq ID
updated 5.2 years ago by 44k • written 9.2 years ago by ★ 1.2k
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1
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1.8k
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Comment: C: <Data Munging> Convert Methylation Percentage to Number of Reads
updated 5.2 years ago by 44k • written 9.3 years ago by ★ 1.2k
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Comment: C: Subsample BAM to fixed number of alignments
updated 5.3 years ago by 44k • written 9.6 years ago by ★ 1.2k
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5.5k
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Comment: C: NaS (Nanopore Synthetic-long) help
updated 5.3 years ago by 44k • written 9.6 years ago by ★ 1.2k
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Comment: C: Counting mapped reads from a SAM file
updated 5.3 years ago by 44k • written 9.6 years ago by ★ 1.2k
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Answer: A: Remove rows based on duplicates in one column
updated 6.4 years ago by 44k • written 8.9 years ago by ★ 1.2k
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Answer: A: Does the number of paired reads have to be exactly the same in Platanus scaffold
updated 6.4 years ago by 44k • written 8.9 years ago by ★ 1.2k
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Answer: A: What is the actual cause of excessive zeroes in single cell RNA-seq data? Is it
7.3 years ago by george.ry ★ 1.2k
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Answer: A: problem in fetching data using excel
7.3 years ago by george.ry ★ 1.2k
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5.5k
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Comment: C: How do I generate all possible Newick Tree permutations for a set of species giv
7.3 years ago by george.ry ★ 1.2k
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18k
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Answer: A: Any alternative (free, open source tool) for Geneious software for phylogenetic
7.3 years ago by george.ry ★ 1.2k
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5.5k
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Comment: C: How do I generate all possible Newick Tree permutations for a set of species giv
7.3 years ago by george.ry ★ 1.2k
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1
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1.6k
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Answer: A: Computing chunk of fasta file before moving to next chunks using python
7.3 years ago by george.ry ★ 1.2k
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1
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5.9k
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Comment: C: How to Run the Script for Extracting Splice Sites from the Gene Annotation File
7.3 years ago by george.ry ★ 1.2k
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Comment: C: Print line based on partial match
7.4 years ago by george.ry ★ 1.2k
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Answer: A: frequency of each nucleotide at each position in sequence
7.4 years ago by george.ry ★ 1.2k
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8.9k
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Answer: A: Run a Python program in Ubuntu
8.0 years ago by george.ry ★ 1.2k
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Answer: A: Error while downloading data using SRA toolkit
8.1 years ago by george.ry ★ 1.2k
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1
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2.4k
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Comment: C: Parse file to remove two characters from the ends of a lot of lines
8.1 years ago by george.ry ★ 1.2k
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1
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2.4k
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Answer: A: Parse file to remove two characters from the ends of a lot of lines
8.1 years ago by george.ry ★ 1.2k
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Answer: A: How to draw a phylogenetic tree together with a genome locus structure?
8.2 years ago by george.ry ★ 1.2k
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1
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2.6k
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Comment: C: Multiple Sequence Alignment tools
8.3 years ago by george.ry ★ 1.2k
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2.6k
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Comment: C: Annotation of repeatative elements
8.4 years ago by george.ry ★ 1.2k
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1
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6.0k
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Answer: A: Split SAM file into smaller SAM files by line count
8.4 years ago by george.ry ★ 1.2k
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Comment: C: What is the future of EMBL-EBI (and European bioinformatics in general) in case
8.6 years ago by george.ry ★ 1.2k
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16k
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Comment: C: Retrieve a subset of FASTA from large multi-FASTA file
8.6 years ago by george.ry ★ 1.2k
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1
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8.8k
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Comment: C: Extracting last N bases of reads in FASTQ file
8.7 years ago by george.ry ★ 1.2k
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1
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103k
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Comment: C: Best Way To Merge A Many Thousand Small Bam Files Into One Big Bam File?
8.9 years ago by george.ry ★ 1.2k
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1
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103k
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Comment: C: Best Way To Merge A Many Thousand Small Bam Files Into One Big Bam File?
8.9 years ago by george.ry ★ 1.2k
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0
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Answer: A: Get sequence from aligned BAM file according to interval in BED file
8.9 years ago by george.ry ★ 1.2k
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1.6k
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Answer: Answer: Assemble small set of reads
updated 2.5 years ago by 44k • written 8.9 years ago by ★ 1.2k
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Comment: C: Installing Vicuna on Biolinux 8 - ncbi_tools++ make error
8.9 years ago by george.ry ★ 1.2k
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0
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7.0k
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Answer: Answer: HISAT (Transcript Alignment) and StringTie (Transcript Assembly)
updated 2.5 years ago by 44k • written 8.9 years ago by ★ 1.2k
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4.4k
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Comment: C: Fastest way from SRA to fastq PE reads
8.9 years ago by george.ry ★ 1.2k
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1
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4.0k
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Comment: C: Converting sra to fastq
9.2 years ago by george.ry ★ 1.2k
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4.8k
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Comment: C: what is the fastest way to sort big bam files? (300Gb)
9.3 years ago by george.ry ★ 1.2k
2
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1
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4.7k
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Answer: A: Error with library("GEOquery") in R
9.4 years ago by george.ry ★ 1.2k
1
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1
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2.1k
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Comment: Comment: find matching rows based on snp ids
updated 2.3 years ago by 44k • written 9.4 years ago by ★ 1.2k
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0
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2.1k
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Comment: Comment: find matching rows based on snp ids
updated 2.3 years ago by 44k • written 9.4 years ago by ★ 1.2k
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0
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4.9k
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Comment: Comment: desktop bioinformatics platform specs
updated 2.2 years ago by 44k • written 9.5 years ago by ★ 1.2k
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9.9k
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Answer: Answer: Coding genotypes from nucleotides to 0/1/2 in R.
updated 2.1 years ago by 44k • written 9.6 years ago by ★ 1.2k
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0
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6.2k
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Comment: Comment: How to extract reads supporting protein-coding gene splice junctions from STAR's
updated 2.1 years ago by 44k • written 9.6 years ago by ★ 1.2k
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