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3.2k
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Answer: A: Plink genotype * sex
6.9 years ago by chrchang523 11k
1
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17k
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Answer: A: How to download VCF of 1000 genome project with population frequencies?
6.9 years ago by chrchang523 11k
3
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1
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12k
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Answer: A: GWAS IN PLINK - SIMPLE YET COMPLICATED
updated 6.9 years ago by 12k • written 6.9 years ago by 11k
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1
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10k
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Comment: C: Forcing A1/A2 alleles in PLINK in a VCF phased file
6.9 years ago by chrchang523 11k
0
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1
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10k
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Comment: C: Forcing A1/A2 alleles in PLINK in a VCF phased file
6.9 years ago by chrchang523 11k
1
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0
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6.5k
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Comment: C: On the usage of Golang
6.9 years ago by chrchang523 11k
3
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1
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6.5k
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Answer: A: On the usage of Golang
6.9 years ago by chrchang523 11k
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0
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1.6k
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Answer: A: Plink: Proper file format for linkage disequilibirum
7.0 years ago by chrchang523 11k
2
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0
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6.3k
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Answer: A: How is imputation r2 calculated in minimac3?
7.0 years ago by chrchang523 11k
1
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1
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3.9k
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Answer: A: What is a faster way than using bcftool's view to extract a population from 1000
updated 7.0 years ago by 12k • written 7.0 years ago by 11k
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0
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3.9k
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Comment: C: What is a faster way than using bcftool's view to extract a population from 1000
7.0 years ago by chrchang523 11k
1
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1
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3.9k
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Comment: C: What is a faster way than using bcftool's view to extract a population from 1000
7.0 years ago by chrchang523 11k
1
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0
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3.6k
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Answer: C: Paper for Plink LD clumping 'greedy algorithm'
updated 7.0 years ago by 12k • written 7.0 years ago by 11k
1
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1
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1.7k
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Answer: C: --condition-list "file" by plink
7.0 years ago by chrchang523 11k
1
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0
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3.7k
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Comment: C: CNT in Plink allele score fuction issue
7.0 years ago by chrchang523 11k
0
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0
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2.0k
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Comment: C: Merging variant replicates rather than filtering
7.0 years ago by chrchang523 11k
0
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1
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2.0k
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Answer: A: Merging variant replicates rather than filtering
7.0 years ago by chrchang523 11k
1
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1
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33k
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Comment: C: Produce PCA bi-plot for 1000 Genomes Phase III in VCF format
7.1 years ago by chrchang523 11k
1
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0
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11k
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Comment: C: Question about the reliability of --check-sex in PLINK2
7.1 years ago by chrchang523 11k
3
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1
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11k
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Answer: A: Question about the reliability of --check-sex in PLINK2
7.1 years ago by chrchang523 11k
4
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1
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6.4k
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Answer: A: Fast way to extract part of genotypes data from 1000 Genome VCF files
7.1 years ago by chrchang523 11k
0
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1
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3.7k
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Comment: C: CNT in Plink allele score fuction issue
7.1 years ago by chrchang523 11k
1
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1
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3.1k
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Answer: A: VCF to Bed file format using GATK
7.1 years ago by chrchang523 11k
1
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0
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4.6k
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Answer: A: Keeping both A1/A2 in PLINK for assoc/logistic output
7.1 years ago by chrchang523 11k
1
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0
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4.4k
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Comment: C: Why my pvalue histogram doesn't have uniform distribution
7.1 years ago by chrchang523 11k
1
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1
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4.4k
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Answer: A: Why my pvalue histogram doesn't have uniform distribution
7.1 years ago by chrchang523 11k
1
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0
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4.3k
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Answer: A: Estimate relatedness in large dataset
7.1 years ago by chrchang523 11k
1
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1
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1.4k
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Answer: A: Genotype frequency per sample
7.1 years ago by chrchang523 11k
2
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1
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5.0k
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Answer: A: PCA implementation in plink
7.1 years ago by chrchang523 11k
7
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0
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9.1k
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Answer: A: What are the major differences between plink and plink2?
7.1 years ago by chrchang523 11k
1
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1
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4.8k
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Answer: A: Info Score > 1 Plink?
7.1 years ago by chrchang523 11k
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0
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4.8k
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Comment: C: Info Score > 1 Plink?
7.1 years ago by chrchang523 11k
3
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1
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3.6k
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Answer: A: Convert .gprobs files to PLINK format
7.2 years ago by chrchang523 11k
2
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0
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8.2k
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Answer: A: How to make bash script operate fast for a 13gb VCF.gz file with 900000 rows and
7.2 years ago by chrchang523 11k
3
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1
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5.2k
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Comment: C: Fst between the combination of populations (pairwise)
7.2 years ago by chrchang523 11k
1
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0
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4.7k
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Comment: C: fcGENE conversion error: Plink dosage to bed/bim/fam
7.2 years ago by chrchang523 11k
0
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0
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6.7k
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Comment: C: When should you left-align INDELs (and why?)
7.3 years ago by chrchang523 11k
11
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1
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6.7k
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Answer: A: When should you left-align INDELs (and why?)
7.3 years ago by chrchang523 11k
0
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1
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17k
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Comment: C: Multisample VCF file to Structure file format ?
7.3 years ago by chrchang523 11k
0
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1
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17k
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Comment: C: Multisample VCF file to Structure file format ?
7.3 years ago by chrchang523 11k
0
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0
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3.5k
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Comment: C: What does NA imply in a plink.raw file for genotype calling?
7.3 years ago by chrchang523 11k
2
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0
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1.8k
views
Answer: A: Triallelic variant - GWAS
7.3 years ago by chrchang523 11k
1
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1
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1.7k
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Comment: C: Can we skip --mind?
7.3 years ago by chrchang523 11k
0
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1
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1.7k
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Answer: A: Can we skip --mind?
7.3 years ago by chrchang523 11k
0
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1
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6.6k
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Answer: A: Beagle imputation - duplication position error
7.3 years ago by chrchang523 11k
1
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1
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61k
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Comment: C: Converting VCF to PLINK .bed binary fileset to check for pedigree errors with KI
7.3 years ago by chrchang523 11k
0
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0
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61k
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Comment: C: Converting VCF to PLINK .bed binary fileset for pedigree checking with KING: How
7.3 years ago by chrchang523 11k
0
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0
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2.8k
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Comment: C: Algorithms for finding nearest range given two lists of ranges?
7.3 years ago by chrchang523 11k
3
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0
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61k
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Comment: C: Converting VCF to PLINK .bed binary fileset: How do the different tools availabl
7.3 years ago by chrchang523 11k
1
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1
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61k
views
Comment: C: Converting VCF to PLINK .bed binary fileset: How do the different tools availabl
7.3 years ago by chrchang523 11k
914 results • Page 13 of 19
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