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2
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Comment: Comment: PLINK2 association study using covariate regression model
updated 3.3 years ago by 45k • written 10.5 years ago by 11k
0
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7.0k
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Comment: C: PLINK2 association study using covariate regression model
10.5 years ago by chrchang523 11k
0
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1
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4.1k
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Comment: Comment: Minor Allele Frequency Filtration
updated 3.3 years ago by 45k • written 10.5 years ago by 11k
1
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1
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4.1k
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Answer: Answer: Minor Allele Frequency Filtration
updated 3.3 years ago by 45k • written 10.5 years ago by 11k
2
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1
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3.8k
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Answer: Answer: Quality control filter by genotype counts in a GWAS?
updated 3.3 years ago by 45k • written 10.5 years ago by 11k
0
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1
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3.8k
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Comment: Comment: Quality control filter by genotype counts in a GWAS?
updated 3.3 years ago by 45k • written 10.5 years ago by 11k
3
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1
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2.6k
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Answer: A: Plink input format
10.5 years ago by chrchang523 11k
0
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0
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6.0k
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Comment: Comment: Quantitative trait analysis
updated 3.3 years ago by 45k • written 10.5 years ago by 11k
1
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2
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6.0k
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Comment: Comment: Quantitative trait analysis
updated 3.4 years ago by 45k • written 10.5 years ago by 11k
0
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0
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5.5k
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Answer: Answer: Plink Family Structure/Population stratification
updated 3.4 years ago by 45k • written 10.6 years ago by 11k
1
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0
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4.0k
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Answer: Answer: How does plink read bed files?
updated 3.4 years ago by 45k • written 10.6 years ago by 11k
0
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0
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2.4k
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Answer: Answer: How to run an identity-by-descent calculation on plink with a p-value threshold?
updated 3.4 years ago by 45k • written 10.6 years ago by 11k
2
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0
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7.9k
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Answer: Answer: How Plink LD-pruning selects which one of the pair SNPs in LD.
updated 3.4 years ago by 45k • written 10.6 years ago by 11k
2
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0
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6.3k
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Answer: Answer: PLINK error: no --covar values loaded
updated 3.4 years ago by 45k • written 10.6 years ago by 11k
1
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1
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6.3k
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Comment: Comment: PLINK error: no --covar values loaded
updated 3.4 years ago by 45k • written 10.6 years ago by 11k
0
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1
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6.3k
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Comment: Comment: PLINK error: no --covar values loaded
updated 3.4 years ago by 45k • written 10.6 years ago by 11k
4
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2
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17k
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Answer: A: Multisample VCF file to Structure file format ?
10.7 years ago by chrchang523 11k
0
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1
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5.0k
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Comment: Comment: How to bypass SNPs with identical A1 and A2 alleles in PLINK?
updated 3.5 years ago by 45k • written 10.7 years ago by 11k
0
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1
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5.0k
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Comment: Comment: How to bypass SNPs with identical A1 and A2 alleles in PLINK?
updated 3.5 years ago by 45k • written 10.7 years ago by 11k
0
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0
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5.0k
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Comment: Comment: How to bypass SNPs with identical A1 and A2 alleles in PLINK?
updated 3.5 years ago by 45k • written 10.7 years ago by 11k
1
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0
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8.4k
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Comment: C: Plink allele scoring output
10.7 years ago by chrchang523 11k
1
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1
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8.4k
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Comment: C: Plink allele scoring output
10.7 years ago by chrchang523 11k
5
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1
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8.4k
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Answer: Answer: Plink allele scoring output
updated 3.5 years ago by 45k • written 10.7 years ago by 11k
0
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0
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4.7k
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Comment: Comment: Plink problem Linkage disequilibrium based SNP pruning
updated 3.5 years ago by 45k • written 10.7 years ago by 11k
0
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1
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5.7k
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Comment: Comment: GWAS analysis using PLINK
updated 3.5 years ago by 45k • written 10.7 years ago by 11k
0
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0
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8.0k
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Comment: Comment: question about PCA in plink 1.9
updated 3.5 years ago by 45k • written 10.7 years ago by 11k
0
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1
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5.7k
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Comment: Comment: GWAS analysis using PLINK
updated 3.5 years ago by 45k • written 10.7 years ago by 11k
0
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1
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8.0k
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Answer: Answer: question about PCA in plink 1.9
updated 3.5 years ago by 45k • written 10.7 years ago by 11k
1
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1
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5.7k
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Answer: Answer: GWAS analysis using PLINK
updated 3.5 years ago by 45k • written 10.7 years ago by 11k
1
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1
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5.2k
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Comment: Comment: From vcf 1000 Genomes plink readable file: is there a way to convert it all (not
updated 3.5 years ago by 45k • written 10.8 years ago by 11k
3
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1
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5.2k
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Answer: Answer: From vcf 1000 Genomes plink readable file: is there a way to convert it all (not
updated 3.5 years ago by 45k • written 10.8 years ago by 11k
3
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0
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7.0k
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Answer: Answer: Tagging SNPs in PLINK
updated 3.5 years ago by 45k • written 10.8 years ago by 11k
0
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1
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6.5k
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Comment: Comment: beagle 4 exception: Duplicate marker
updated 3.5 years ago by 45k • written 10.8 years ago by 11k
3
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1
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6.5k
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Answer: Answer: beagle 4 exception: Duplicate marker
updated 3.5 years ago by 45k • written 10.8 years ago by 11k
3
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1
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9.1k
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Answer: Answer: convert imputed genotypes in VCF file to plink format
updated 3.5 years ago by 45k • written 10.8 years ago by 11k
1
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1
reply
10k
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Answer: Answer: bcftools: invalid option -- b was showed error
updated 3.5 years ago by 45k • written 10.8 years ago by 11k
1
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0
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11k
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Comment: Comment: Weir And Cockerham Fst from PLINK(bed/bim/fam) input files
updated 3.6 years ago by 45k • written 10.8 years ago by 11k
0
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2
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11k
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Comment: C: Weir And Cockerham Fst from PLINK(bed/bim/fam) input files
10.8 years ago by chrchang523 11k
0
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0
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6.6k
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Comment: Comment: Combining inhouse data with 1000 genome for PCA
updated 3.6 years ago by 45k • written 10.8 years ago by 11k
0
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1
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6.6k
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Comment: Comment: Combining inhouse data with 1000 genome for PCA
updated 3.6 years ago by 45k • written 10.8 years ago by 11k
1
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0
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6.6k
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Answer: Answer: Combining inhouse data with 1000 genome for PCA
updated 3.6 years ago by 45k • written 10.8 years ago by 11k
1
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1
reply
3.9k
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Comment: Comment: Convert plink to classical BED
updated 3.6 years ago by 45k • written 10.8 years ago by 11k
0
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0
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3.3k
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Comment: C: Selecting SNPs to impute in Plink
10.8 years ago by chrchang523 11k
1
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1
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3.3k
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Answer: Answer: Selecting SNPs to impute in Plink
updated 3.6 years ago by 45k • written 10.8 years ago by 11k
0
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0
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6.5k
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Answer: A: How to handle duplicate SNPs in PLINK?
10.8 years ago by chrchang523 11k
1
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1
reply
5.4k
views
Answer: Answer: ERROR: Stopping due to mis-matching SNPs -- check +/- strand?
updated 3.6 years ago by 45k • written 10.9 years ago by 11k
0
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0
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23k
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Comment: Comment: remove non biallelic SNPs from ped
updated 3.6 years ago by 45k • written 10.9 years ago by 11k
3
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1
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23k
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Answer: Answer: remove non biallelic SNPs from ped
updated 3.6 years ago by 45k • written 10.9 years ago by 11k
0
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1
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3.4k
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Comment: Comment: .lgen to .ped conversion failing
updated 3.6 years ago by 45k • written 10.9 years ago by 11k
1
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0
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3.4k
views
Comment: C: .lgen to .ped conversion failing
10.9 years ago by chrchang523 11k
914 results • Page 17 of 19
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