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Comment:
Comment: 1 Bioinformatician position in San Sebastian (Spain)
10 weeks ago by
ManuelDB
▴ 80
0
votes
0
replies
222
views
Comment:
Comment: FastaAlternateReferenceMaker merges overlapping regions
12 weeks ago by
ManuelDB
▴ 80
0
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0
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495
views
Comment:
Comment: CIGAR and query sequence lengths differ
4 months ago by
ManuelDB
▴ 80
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0
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495
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Comment:
Comment: CIGAR and query sequence lengths differ
4 months ago by
ManuelDB
▴ 80
0
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0
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835
views
Comment:
Comment: Different number of reads when converting data from FASTQ to BAM and CRAM to FAS
6 months ago by
ManuelDB
▴ 80
0
votes
0
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835
views
Comment:
Comment: Different number of reads when converting data from FASTQ to BAM and CRAM to FAS
6 months ago by
ManuelDB
▴ 80
0
votes
1
reply
835
views
Comment:
Comment: Different number of reads when converting data from FASTQ to BAM and CRAM to FAS
6 months ago by
ManuelDB
▴ 80
0
votes
2
replies
835
views
Comment:
Comment: Different number of reads when converting data from FASTQ to BAM and CRAM to FAS
6 months ago by
ManuelDB
▴ 80
0
votes
1
reply
835
views
Comment:
Comment: Different number of reads when converting data from FASTQ to BAM and CRAM to FAS
6 months ago by
ManuelDB
▴ 80
0
votes
0
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705
views
Comment:
Comment: FASTQ to BAM to CRAM to FASTQ
6 months ago by
ManuelDB
▴ 80
0
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0
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37k
views
Comment:
Comment: installing samtools with conda - overcoming two common errors
6 months ago by
ManuelDB
▴ 80
0
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0
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21k
views
Comment:
Comment: How To Efficiently Sort A Fastq File By Entry Id?
6 months ago by
ManuelDB
▴ 80
0
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0
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547
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Comment:
Comment: How to deal with reads which CIGAR is [0-9]+S
6 months ago by
ManuelDB
▴ 80
0
votes
0
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993
views
Comment:
Comment: Liftover GRCh37 to hg38 1kg/GATK.
7 months ago by
ManuelDB
▴ 80
0
votes
0
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664
views
Comment:
Comment: samtools ampliconclip option --strand is not working?
8 months ago by
ManuelDB
▴ 80
1
vote
0
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959
views
Comment:
Comment: How is the format of the bed file for samtools ampliconclip
8 months ago by
ManuelDB
▴ 80
0
votes
1
reply
959
views
Comment:
Comment: How is the format of the bed file for samtools ampliconclip
8 months ago by
ManuelDB
▴ 80
0
votes
0
replies
1.4k
views
Comment:
Comment: From primers sequence to Bed file
9 months ago by
ManuelDB
▴ 80
0
votes
1
reply
1.4k
views
Comment:
Comment: From primers sequence to Bed file
9 months ago by
ManuelDB
▴ 80
0
votes
1
reply
1.4k
views
Comment:
Comment: From primers sequence to Bed file
9 months ago by
ManuelDB
▴ 80
0
votes
1
reply
1.4k
views
Comment:
Comment: From primers sequence to Bed file
9 months ago by
ManuelDB
▴ 80
0
votes
0
replies
1.4k
views
Comment:
Comment: From primers sequence to Bed file
9 months ago by
ManuelDB
▴ 80
0
votes
1
reply
1.7k
views
Comment:
Comment: Count regions that overlap with python
21 months ago by
ManuelDB
▴ 80
0
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0
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1.7k
views
Comment:
Comment: Count regions that overlap with python
21 months ago by
ManuelDB
▴ 80
0
votes
1
reply
1.1k
views
Comment:
Comment: How annotation can be validated
23 months ago by
ManuelDB
▴ 80
0
votes
0
replies
1.1k
views
Comment:
Comment: How annotation can be validated
23 months ago by
ManuelDB
▴ 80
0
votes
2
replies
1.1k
views
Comment:
Comment: How annotation can be validated
23 months ago by
ManuelDB
▴ 80
0
votes
1
reply
2.5k
views
Comment:
Comment: File write failed (wrong size) when filtering a bam file with interset
2.1 years ago by
ManuelDB
▴ 80
0
votes
0
replies
2.5k
views
Comment:
Comment: File write failed (wrong size) when filtering a bam file with interset
updated 2.1 years ago by
GenoMax
142k • written 2.1 years ago by
ManuelDB
▴ 80
0
votes
1
reply
760
views
Comment:
Comment: Calling variants after using different read alignment programs
2.1 years ago by
ManuelDB
▴ 80
1
vote
0
replies
678
views
Comment:
Comment: Unexpected results when alignment FASTQ files with different read alignments
2.1 years ago by
ManuelDB
▴ 80
0
votes
2
replies
1.4k
views
Comment:
Comment: Cannot read non-existent file: when executing MarkDuplicates in a script
2.1 years ago by
ManuelDB
▴ 80
0
votes
0
replies
573
views
Comment:
Comment: Bus error (core dumped) when Aligning contigs to the reference in QUAST
2.1 years ago by
ManuelDB
▴ 80
0
votes
0
replies
573
views
Comment:
Comment: Bus error (core dumped) when Aligning contigs to the reference in QUAST
2.1 years ago by
ManuelDB
▴ 80
0
votes
1
reply
1.8k
views
Comment:
Comment: Troubles running IGV on a server.
2.1 years ago by
ManuelDB
▴ 80
0
votes
1
reply
1.8k
views
Comment:
Comment: Troubles running IGV on a server.
2.1 years ago by
ManuelDB
▴ 80
0
votes
1
reply
1.8k
views
Comment:
Comment: Troubles running IGV on a server.
2.1 years ago by
ManuelDB
▴ 80
0
votes
0
replies
2.9k
views
Comment:
Comment: How do I count the real total reads from a fastq file?
2.1 years ago by
ManuelDB
▴ 80
0
votes
1
reply
678
views
Comment:
Comment: Unexpected results when alignment FASTQ files with different read alignments
2.1 years ago by
ManuelDB
▴ 80
0
votes
2
replies
2.1k
views
Comment:
Comment: Are not all duplicated reads removed when applying removal duplicated algorithms
2.1 years ago by
ManuelDB
▴ 80
0
votes
0
replies
2.2k
views
Comment:
Comment: How do you know if a variant is in cis or trans when looking at it with IGV
2.2 years ago by
ManuelDB
▴ 80
0
votes
1
reply
860
views
Comment:
Comment: Why is needed a genome reference when calling variants
2.2 years ago by
ManuelDB
▴ 80
0
votes
1
reply
649
views
Comment:
Comment: Find a position in IGV when variant is giving in the format gene_name 12345-1G>
2.2 years ago by
ManuelDB
▴ 80
0
votes
1
reply
1.2k
views
Comment:
Comment: How to extract gene name and transcript name from the INFO column of a VCF file
2.2 years ago by
ManuelDB
▴ 80
0
votes
0
replies
1.4k
views
Comment:
Comment: Strange error when using gzip.open with a VCF file
2.2 years ago by
ManuelDB
▴ 80
0
votes
0
replies
520
views
Comment:
Comment: iterating over LiftOver in big dataset
2.2 years ago by
ManuelDB
▴ 80
0
votes
0
replies
696
views
Comment:
Comment: Unrecognised chromosome value (e.g. chr16_KI270853v1_alt) in the UCSC Genome Bro
2.2 years ago by
ManuelDB
▴ 80
0
votes
0
replies
632
views
Comment:
Comment: How to evaluate which genome reference and alignment tool is "the best" for my p
2.3 years ago by
ManuelDB
▴ 80
0
votes
0
replies
1.1k
views
Comment:
Comment: I can't understand my sam files
2.3 years ago by
ManuelDB
▴ 80
0
votes
2
replies
1.1k
views
Comment:
Comment: Why are there many start_codon for the same gene in hg38.refGene.gtf
2.3 years ago by
ManuelDB
▴ 80
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