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Answer: Answer: I would like to exclude rRNA in RSEM and quantify other genes.
21 months ago by jv ★ 1.9k
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1.6k
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Comment: Comment: Create Signature Matrix Cibersort
21 months ago by jv ★ 1.9k
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1.1k
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Answer: Answer: Enrichement with clusterProfiler and biomartr
21 months ago by jv ★ 1.9k
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0
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1.1k
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Comment: Comment: Enrichement with clusterProfiler and biomartr
21 months ago by jv ★ 1.9k
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1
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1.1k
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Comment: Comment: Estimating the similarity of an RNA-seq sample based on a reference expression p
22 months ago by jv ★ 1.9k
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2.0k
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Comment: Comment: Correlate number of cells with gene expression of one gene in scRNA Seq
22 months ago by jv ★ 1.9k
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0
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2.0k
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Comment: Comment: Correlate number of cells with gene expression of one gene in scRNA Seq
22 months ago by jv ★ 1.9k
1
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1
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2.0k
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Comment: Comment: Correlate number of cells with gene expression of one gene in scRNA Seq
22 months ago by jv ★ 1.9k
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2
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2.0k
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Answer: Answer: Correlate number of cells with gene expression of one gene in scRNA Seq
22 months ago by jv ★ 1.9k
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5.0k
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Comment: Comment: Install STAR on MacBook Pro M1
22 months ago by jv ★ 1.9k
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5.0k
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Answer: Answer: Install STAR on MacBook Pro M1
22 months ago by jv ★ 1.9k
0
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1
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875
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Comment: Comment: From nucleotide or proteine sequences to EC number using biopython
22 months ago by jv ★ 1.9k
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0
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2.4k
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Answer: Answer: Unable to fetch human protein sequence through UniProt API
updated 22 months ago by 45k • written 22 months ago by ★ 1.9k
1
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0
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1.7k
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Comment: Comment: Quantile normalisation on RNAseq with substantial differences on sample size
22 months ago by jv ★ 1.9k
1
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1
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1.4k
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Comment: Comment: Obtain fitted data from DESeq2
22 months ago by jv ★ 1.9k
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0
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990
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Comment: Comment: sample data for plant RNA seq analysis
22 months ago by jv ★ 1.9k
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2.2k
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Comment: Comment: No genes mapped in clusterprofiler gseGO
22 months ago by jv ★ 1.9k
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1
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2.2k
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Comment: Comment: No genes mapped in clusterprofiler gseGO
22 months ago by jv ★ 1.9k
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1
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2.2k
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Comment: Comment: No genes mapped in clusterprofiler gseGO
22 months ago by jv ★ 1.9k
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5.3k
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Comment: Comment: No gene can be mapped
22 months ago by jv ★ 1.9k
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1
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805
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Comment: Comment: Ribo-Seq Samtools pileup
22 months ago by jv ★ 1.9k
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2.6k
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Comment: Comment: Error in schicexplorer's hicbuildmatrix
22 months ago by jv ★ 1.9k
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1
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2.6k
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Comment: Comment: Error in schicexplorer's hicbuildmatrix
22 months ago by jv ★ 1.9k
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1
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2.6k
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Answer: Answer: Error in schicexplorer's hicbuildmatrix
22 months ago by jv ★ 1.9k
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1
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2.1k
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Answer: Answer: Getting gene counts from transcript counts using R package 'tximport'
22 months ago by jv ★ 1.9k
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0
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901
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Comment: Comment: Database for immunological pathways
23 months ago by jv ★ 1.9k
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0
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2.4k
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Answer: Answer: R ComplexHeatmap - Adujusting the cell size in heatmap
23 months ago by jv ★ 1.9k
1
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1
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2.7k
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Comment: Comment: Finding differentially expressed genes between Seurat clusters
23 months ago by jv ★ 1.9k
0
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1
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2.6k
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Comment: Comment: Error in schicexplorer's hicbuildmatrix
23 months ago by jv ★ 1.9k
2
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0
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3.1k
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Comment: Comment: How to remove center population from seurat cluster
23 months ago by jv ★ 1.9k
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0
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3.2k
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Comment: Comment: ORA with clusterProfiler
23 months ago by jv ★ 1.9k
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1
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1.8k
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Comment: Comment: Overlapping and merging ChIP-seq peaks
23 months ago by jv ★ 1.9k
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0
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731
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Answer: Answer: Need Help Mapping Probe IDs to Gene Symbols
23 months ago by jv ★ 1.9k
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1
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2.7k
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Comment: Comment: Finding differentially expressed genes between Seurat clusters
23 months ago by jv ★ 1.9k
0
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1
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2.6k
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Comment: Comment: i ues schicexplorer's hicbuildmatrix code complains that two sam files do not ha
23 months ago by jv ★ 1.9k
1
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0
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955
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Comment: Comment: KEGG DATABASE
23 months ago by jv ★ 1.9k
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0
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1.1k
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Answer: Answer: RNA seq
23 months ago by jv ★ 1.9k
0
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0
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769
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Comment: Comment: Contrasts in R
23 months ago by jv ★ 1.9k
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0
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2.0k
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Answer: Answer: Can I use TCGA-LUAD RNAseq count that had already normalized by RSEM in Limma-vo
updated 23 months ago by 45k • written 23 months ago by ★ 1.9k
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2.0k
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Comment: Comment: scRNA-seq: Consistent low number of cells and low fraction reads across the samp
23 months ago by jv ★ 1.9k
2
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1
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1.8k
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Answer: Answer: Is there a need to batch correct FPKM or TPM values for within sample comparison
23 months ago by jv ★ 1.9k
1
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0
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1.2k
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Comment: Comment: R ComplexHeatmap - Dividing Column Annotation into Distinct Y-Axis Scales
23 months ago by jv ★ 1.9k
0
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1
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1.2k
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Comment: Comment: R ComplexHeatmap - Dividing Column Annotation into Distinct Y-Axis Scales
23 months ago by jv ★ 1.9k
0
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1
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2.4k
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Comment: Comment: Data preparation for a ML model
23 months ago by jv ★ 1.9k
0
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0
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785
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Answer: Answer: DESeq2 with unbalanced dataset and multifactor design
24 months ago by jv ★ 1.9k
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2
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2.4k
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Comment: Comment: Data preparation for a ML model
24 months ago by jv ★ 1.9k
1
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1
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2.4k
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Comment: Comment: Data preparation for a ML model
24 months ago by jv ★ 1.9k
0
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0
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1.8k
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Comment: Comment: Selecting a subset of MSigDB database for GSEA
24 months ago by jv ★ 1.9k
1
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1
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2.3k
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Comment: Comment: scRNA-seq quality control
24 months ago by jv ★ 1.9k
3
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0
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998
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Answer: Answer: Database of Mapped Data for Single Cell Sequencing
24 months ago by jv ★ 1.9k
383 results • Page 2 of 8
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