Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
1.0k
views
Answer: Answer: I would like to exclude rRNA in RSEM and quantify other genes.
3 months ago by jv ★ 1.8k
1
vote
1
reply
349
views
Comment: Comment: Create Signature Matrix Cibersort
3 months ago by jv ★ 1.8k
0
votes
0
replies
486
views
Answer: Answer: Enrichement with clusterProfiler and biomartr
3 months ago by jv ★ 1.8k
0
votes
0
replies
486
views
Comment: Comment: Enrichement with clusterProfiler and biomartr
3 months ago by jv ★ 1.8k
0
votes
1
reply
387
views
Comment: Comment: Estimating the similarity of an RNA-seq sample based on a reference expression p
3 months ago by jv ★ 1.8k
1
vote
0
replies
738
views
Comment: Comment: Correlate number of cells with gene expression of one gene in scRNA Seq
3 months ago by jv ★ 1.8k
0
votes
0
replies
738
views
Comment: Comment: Correlate number of cells with gene expression of one gene in scRNA Seq
3 months ago by jv ★ 1.8k
1
vote
1
reply
738
views
Comment: Comment: Correlate number of cells with gene expression of one gene in scRNA Seq
3 months ago by jv ★ 1.8k
1
vote
2
replies
738
views
Answer: Answer: Correlate number of cells with gene expression of one gene in scRNA Seq
3 months ago by jv ★ 1.8k
0
votes
0
replies
917
views
Comment: Comment: Install STAR on MacBook Pro M1
3 months ago by jv ★ 1.8k
0
votes
0
replies
917
views
Answer: Answer: Install STAR on MacBook Pro M1
3 months ago by jv ★ 1.8k
0
votes
1
reply
362
views
Comment: Comment: From nucleotide or proteine sequences to EC number using biopython
3 months ago by jv ★ 1.8k
1
vote
0
replies
834
views
Comment: Comment: Quantile normalisation on RNAseq with substantial differences on sample size
3 months ago by jv ★ 1.8k
1
vote
1
reply
519
views
Comment: Comment: Obtain fitted data from DESeq2
3 months ago by jv ★ 1.8k
0
votes
0
replies
478
views
Comment: Comment: sample data for plant RNA seq analysis
4 months ago by jv ★ 1.8k
2
votes
1
reply
728
views
Comment: Comment: No genes mapped in clusterprofiler gseGO
4 months ago by jv ★ 1.8k
1
vote
1
reply
728
views
Comment: Comment: No genes mapped in clusterprofiler gseGO
4 months ago by jv ★ 1.8k
0
votes
1
reply
728
views
Comment: Comment: No genes mapped in clusterprofiler gseGO
4 months ago by jv ★ 1.8k
0
votes
0
replies
3.9k
views
Comment: Comment: No gene can be mapped
4 months ago by jv ★ 1.8k
0
votes
1
reply
324
views
Comment: Comment: Ribo-Seq Samtools pileup
4 months ago by jv ★ 1.8k
0
votes
0
replies
1.4k
views
Comment: Comment: Error in schicexplorer's hicbuildmatrix
4 months ago by jv ★ 1.8k
0
votes
1
reply
1.4k
views
Comment: Comment: Error in schicexplorer's hicbuildmatrix
4 months ago by jv ★ 1.8k
0
votes
1
reply
1.4k
views
Answer: Answer: Error in schicexplorer's hicbuildmatrix
4 months ago by jv ★ 1.8k
1
vote
1
reply
761
views
Answer: Answer: Getting gene counts from transcript counts using R package 'tximport'
4 months ago by jv ★ 1.8k
0
votes
0
replies
341
views
Comment: Comment: Database for immunological pathways
4 months ago by jv ★ 1.8k
0
votes
0
replies
496
views
Answer: Answer: R ComplexHeatmap - Adujusting the cell size in heatmap
4 months ago by jv ★ 1.8k
1
vote
1
reply
987
views
Comment: Comment: Finding differentially expressed genes between Seurat clusters
4 months ago by jv ★ 1.8k
0
votes
1
reply
1.4k
views
Comment: Comment: Error in schicexplorer's hicbuildmatrix
4 months ago by jv ★ 1.8k
2
votes
0
replies
918
views
Comment: Comment: How to remove center population from seurat cluster
4 months ago by jv ★ 1.8k
1
vote
0
replies
612
views
Comment: Comment: ORA with clusterProfiler
4 months ago by jv ★ 1.8k
1
vote
1
reply
636
views
Comment: Comment: Overlapping and merging ChIP-seq peaks
4 months ago by jv ★ 1.8k
0
votes
0
replies
292
views
Answer: Answer: Need Help Mapping Probe IDs to Gene Symbols
4 months ago by jv ★ 1.8k
0
votes
1
reply
987
views
Comment: Comment: Finding differentially expressed genes between Seurat clusters
4 months ago by jv ★ 1.8k
0
votes
1
reply
1.4k
views
Comment: Comment: i ues schicexplorer's hicbuildmatrix code complains that two sam files do not ha
4 months ago by jv ★ 1.8k
1
vote
0
replies
471
views
Comment: Comment: KEGG DATABASE
4 months ago by jv ★ 1.8k
0
votes
0
replies
555
views
Answer: Answer: RNA seq
4 months ago by jv ★ 1.8k
0
votes
0
replies
322
views
Comment: Comment: Contrasts in R
4 months ago by jv ★ 1.8k
0
votes
0
replies
840
views
Answer: Answer: Can I use TCGA-LUAD RNAseq count that had already normalized by RSEM in Limma-vo
updated 4 months ago by 43k • written 4 months ago by ★ 1.8k
0
votes
0
replies
835
views
Comment: Comment: scRNA-seq: Consistent low number of cells and low fraction reads across the samp
4 months ago by jv ★ 1.8k
2
votes
1
reply
686
views
Answer: Answer: Is there a need to batch correct FPKM or TPM values for within sample comparison
4 months ago by jv ★ 1.8k
1
vote
0
replies
488
views
Comment: Comment: R ComplexHeatmap - Dividing Column Annotation into Distinct Y-Axis Scales
5 months ago by jv ★ 1.8k
0
votes
1
reply
488
views
Comment: Comment: R ComplexHeatmap - Dividing Column Annotation into Distinct Y-Axis Scales
5 months ago by jv ★ 1.8k
0
votes
1
reply
1.0k
views
Comment: Comment: Data preparation for a ML model
5 months ago by jv ★ 1.8k
0
votes
0
replies
321
views
Answer: Answer: DESeq2 with unbalanced dataset and multifactor design
5 months ago by jv ★ 1.8k
0
votes
2
replies
1.0k
views
Comment: Comment: Data preparation for a ML model
5 months ago by jv ★ 1.8k
1
vote
1
reply
1.0k
views
Comment: Comment: Data preparation for a ML model
5 months ago by jv ★ 1.8k
0
votes
0
replies
627
views
Comment: Comment: Selecting a subset of MSigDB database for GSEA
5 months ago by jv ★ 1.8k
0
votes
1
reply
956
views
Comment: Comment: scRNA-seq quality control
5 months ago by jv ★ 1.8k
1
vote
0
replies
533
views
Answer: Answer: Database of Mapped Data for Single Cell Sequencing
5 months ago by jv ★ 1.8k
0
votes
0
replies
528
views
Comment: Comment: WGCNA
5 months ago by jv ★ 1.8k
382 results • Page 2 of 8
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6