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Answer: Answer: ClusterProfiler enrichKEGG – remove organism name in plots?
14 months ago by jv ★ 1.8k
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645
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Comment: Comment: Error with a function in ATAC-seq analysis
14 months ago by jv ★ 1.8k
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645
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Comment: Comment: Error with a function in ATAC-seq analysis
14 months ago by jv ★ 1.8k
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1.9k
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Answer: Answer: Running AUCell on integrated scRNAseq data
14 months ago by jv ★ 1.8k
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1.4k
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Comment: Comment: Inclusion of R script in shiny application
14 months ago by jv ★ 1.8k
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1.4k
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Comment: Comment: Inclusion of R script in shiny application
14 months ago by jv ★ 1.8k
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1.7k
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Comment: Comment: WGCNA hub genes VS. DEG
14 months ago by jv ★ 1.8k
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928
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Comment: Comment: Between sample normalization without replicates
14 months ago by jv ★ 1.8k
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2.4k
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Answer: Answer: How exactly can I define promoter region from GENCODE annotation GTF file?
14 months ago by jv ★ 1.8k
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1.1k
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Comment: Comment: Genes in 10x don't match genes in ENSBL
14 months ago by jv ★ 1.8k
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587
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Comment: Comment: If using singeR return more clusters than available ones should I do reclusterin
14 months ago by jv ★ 1.8k
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1
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2.4k
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Comment: Comment: How exactly can I define promoter region from GENCODE annotation GTF file?
14 months ago by jv ★ 1.8k
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1.1k
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Comment: Comment: Genes in 10x don't match genes in ENSBL
14 months ago by jv ★ 1.8k
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1.1k
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Comment: Comment: Trimmomatic generated two (reverse-forward) paired-files with different number o
14 months ago by jv ★ 1.8k
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0
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665
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Comment: Comment: New to RNA Seq Analysis ...
14 months ago by jv ★ 1.8k
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560
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Comment: Comment: Get KEGG's functional annotation by KEGG organism ID and gene name
14 months ago by jv ★ 1.8k
3
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1.2k
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Answer: Answer: How to annotate a MACS2 peak output file that is in tabular format?
14 months ago by jv ★ 1.8k
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636
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Comment: Comment: Aggregating multiple 10 X samples count matrices into one before analysis.
14 months ago by jv ★ 1.8k
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1.8k
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Comment: Comment: Issues marking genes in ComplexHeatmap
14 months ago by jv ★ 1.8k
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2.1k
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Comment: Comment: Overlay points with EnhancedVolcano R
14 months ago by jv ★ 1.8k
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1
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1.2k
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Comment: Comment: cellchat probelm
14 months ago by jv ★ 1.8k
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1
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506
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Answer: Answer: Bam to bedgraph
14 months ago by jv ★ 1.8k
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1
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1.1k
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Answer: Answer: Merge common elements in R
15 months ago by jv ★ 1.8k
2
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1
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805
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Answer: Answer: Is there a package that can do downstream analysis of single-cell V(D)J sequenci
15 months ago by jv ★ 1.8k
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1.6k
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Answer: Answer: How does enrichGO function calculated p-value?
15 months ago by jv ★ 1.8k
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1.1k
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Answer: Answer: Assigning multiple identities to seurat metadata
updated 15 months ago by 43k • written 15 months ago by ★ 1.8k
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525
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Comment: Comment: Recommendations for API/Flat file DB describing physical and biological properti
15 months ago by jv ★ 1.8k
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0
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858
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Comment: Comment: expression of the GAT1 transport protein
15 months ago by jv ★ 1.8k
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2
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858
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Answer: Answer: expression of the GAT1 transport protein
15 months ago by jv ★ 1.8k
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1
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858
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Comment: Comment: expression of the GAT1 transport protein
15 months ago by jv ★ 1.8k
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1
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613
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Comment: Comment: How to perform meta analysis for identification of heterogeneity between gene ex
15 months ago by jv ★ 1.8k
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648
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Comment: Comment: How to compare different illumina indices with each other to see how similar or
15 months ago by jv ★ 1.8k
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0
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463
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Comment: Comment: Filter InterProScan output for a specific function
15 months ago by jv ★ 1.8k
2
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1
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739
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Answer: Answer: want the codes for cuffdiff , NIOSeq , bayseq to perform DEGs.
15 months ago by jv ★ 1.8k
1
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1
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1.2k
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Comment: Comment: fastqc: Per base sequence content
15 months ago by jv ★ 1.8k
2
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0
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808
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Answer: Answer: How to merge unique/non overlapping genes between 2 gene model GFF3 files?
15 months ago by jv ★ 1.8k
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1
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1.0k
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Answer: Answer: Trimmomatic
15 months ago by jv ★ 1.8k
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0
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1.1k
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Comment: Comment: Single sample GSEA analysis
15 months ago by jv ★ 1.8k
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1.1k
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Answer: Answer: Single sample GSEA analysis
15 months ago by jv ★ 1.8k
2
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1
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572
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Answer: Answer: How do I remove certain reads from my raw sequencing data using BLAST?
15 months ago by jv ★ 1.8k
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0
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1.6k
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Comment: Comment: Aggregate gene expression
15 months ago by jv ★ 1.8k
1
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1
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2.3k
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Answer: Answer: GSEA on nonmodel organisms
15 months ago by jv ★ 1.8k
0
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1
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489
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Comment: Comment: Breast Cancer Bone Metastasis Basal Expression
16 months ago by jv ★ 1.8k
3
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0
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1.2k
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Answer: Answer: Gene Set Enrichment Analysis, pathway, metabolism
16 months ago by jv ★ 1.8k
0
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1
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1.8k
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Comment: Comment: What does it mean in GSEA when HALLMARK_UV_RESPONSE_DN is upregulated ? how it's
16 months ago by jv ★ 1.8k
1
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0
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657
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Answer: Answer: deconvolution of spatial transcriptome
16 months ago by jv ★ 1.8k
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0
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607
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Comment: Comment: The aggregated expression of several genes
16 months ago by jv ★ 1.8k
1
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1
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1.5k
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Answer: Answer: TPM values from TCGA datasets
16 months ago by jv ★ 1.8k
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0
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605
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Comment: Comment: Convert NMDS object in vegan to a tibble object
16 months ago by jv ★ 1.8k
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0
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546
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Comment: Comment: DESeq2: contrasts vs results_names coefficents
17 months ago by jv ★ 1.8k
382 results • Page 4 of 8
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