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questions
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351
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How to find LD matrix for a large group of SNPs (more than 6000 SNPs)
SNP
LD
9 months ago by
Phylicia
▴ 10
2
votes
6
replies
914
views
How to find gene id and gene name after I know rsid
SNP
8 months ago by
Phylicia
▴ 10
0
votes
0
replies
599
views
How to deal high multicollinearity during multiple imputation
imputation
high
multicolinearity
multiple
19 months ago by
Phylicia
▴ 10
0
votes
0
replies
361
views
How to draw diamond as long as confidence interval in forest plot in R
meta
forestplot
diamond
22 months ago by
Phylicia
▴ 10
0
votes
0
replies
308
views
Is there any R package for time-varying mediation but with invariant exposure and outcome
mediation
effect
time
model
varying
2.1 years ago by
Phylicia
▴ 10
0
votes
2
replies
574
views
recode bed file into raw data, but the genotype count does not follow the base data
genotype
ubuntu
bed
plink
2.2 years ago by
Phylicia
▴ 10
0
votes
1
reply
2.5k
views
How to calculate polygenic risk score by Plink code
sscore
PRS
Plink
2.2 years ago by
Phylicia
▴ 10
0
votes
2
replies
587
views
How to select panlindromic SNPs in R
SNP
panlindromic
2.2 years ago by
Phylicia
▴ 10
0
votes
0
replies
403
views
How to find out why PRSice-2 excludes ambiguous SNPs
PRS
PRSice
2.2 years ago by
Phylicia
▴ 10
2
votes
2
replies
1.6k
views
How to open the genotype information in a bed file in R or Ubuntu
ubuntu
bed
genotype
R
updated 13 months ago by
Ram
43k • written 2.2 years ago by
Phylicia
▴ 10
2
votes
1
reply
1.0k
views
Why the polygenic risk scores calculated by Plink and PRSice-2 are different
PRS
Plink
updated 2.3 years ago by
Sam
★ 4.7k • written 2.3 years ago by
Phylicia
▴ 10
7
votes
6
replies
1.4k
views
How to select rows in a column and add a zero to selected rows
data
clean
2.3 years ago by
Phylicia
▴ 10
5
votes
11
replies
2.1k
views
How to apply lapply function and loop function at the same time
loop
lappy
Plink
2.3 years ago by
Phylicia
▴ 10
0
votes
7
replies
2.7k
views
PLINK basic command line usage
polygenic
plink
ubuntun
2.3 years ago by
Phylicia
▴ 10
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