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Comment: Comment: RNA-seq pipeline
3 months ago by raphael.B ▴ 520
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1
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461
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Comment: Comment: bcftools=1.18 not filtering correcting MAF
4 months ago by raphael.B ▴ 520
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0
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1.7k
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Comment: Comment: Problem with mamba/conda env create
9 months ago by raphael.B ▴ 520
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2
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1.7k
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Comment: Comment: Problem with mamba/conda install
9 months ago by raphael.B ▴ 520
1
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0
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707
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Comment: Comment: Hwo to identify that BQSR is performed on CRAM file
9 months ago by raphael.B ▴ 520
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0
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627
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Comment: Comment: rust_htslib unrecognized filter ID
10 months ago by raphael.B ▴ 520
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702
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Comment: Comment: Processing WES VCF for case control GWAS analysis
11 months ago by raphael.B ▴ 520
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0
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956
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Comment: Comment: vcftools on 2 snpeff vcf files
12 months ago by raphael.B ▴ 520
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1
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956
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Comment: Comment: vcftools on 2 snpeff vcf files
12 months ago by raphael.B ▴ 520
1
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1
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976
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Comment: Comment: Any tutorial how to "link" SNPs with genes?
12 months ago by raphael.B ▴ 520
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1
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2.3k
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Comment: Comment: Snakemake doesn't recognize output files even though they are created
12 months ago by raphael.B ▴ 520
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1
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2.3k
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Comment: Comment: Snakemake doesn't recognize output files even though they are created
13 months ago by raphael.B ▴ 520
2
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0
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1.0k
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Comment: Comment: error with CombineGVCFs to join large number of files
13 months ago by raphael.B ▴ 520
1
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1
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1.6k
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Comment: Comment: GATK GenotypeGVCFs explain
13 months ago by raphael.B ▴ 520
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0
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678
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Comment: Comment: filter VCF based on FORMAT
13 months ago by raphael.B ▴ 520
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1
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1.7k
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Comment: Comment: GATK4.3 ApplyBQSR
14 months ago by raphael.B ▴ 520
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1
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1.0k
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Comment: Comment: AF=NA in gnomad vcf
updated 16 months ago by 43k • written 16 months ago by ▴ 520
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813
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Comment: Comment: STAR Aligment
17 months ago by raphael.B ▴ 520
1
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824
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Comment: Comment: Representation of variables in PCA
19 months ago by raphael.B ▴ 520
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1
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868
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Comment: Comment: How to Extract SNPs from Linkage Disequilibrium data with r2 > 0.6 threshold?
21 months ago by raphael.B ▴ 520
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0
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1.2k
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Comment: Comment: Writing a function in R which will identify peaks within a data frame
21 months ago by raphael.B ▴ 520
3
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1
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924
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Comment: Comment: A question about BED file and finding mutation in vcf file
21 months ago by raphael.B ▴ 520
1
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0
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837
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Comment: Comment: Snakemake wildcards overwriting one another
21 months ago by raphael.B ▴ 520
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0
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1.0k
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Comment: Comment: Find consecutive duplicate strings in rows from df
21 months ago by raphael.B ▴ 520
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1
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2.0k
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Comment: Comment: Pass a python dictionary as a snakemake variable (input and output)
21 months ago by raphael.B ▴ 520
0
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1
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2.0k
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Comment: Comment: Pass a python dictionary as a snakemake variable (input and output)
21 months ago by raphael.B ▴ 520
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0
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1.4k
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Comment: Comment: Samtools mean depth and max depth results are discordant
22 months ago by raphael.B ▴ 520
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1
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1.4k
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Comment: Comment: Samtools mean depth and max depth results are discordant
22 months ago by raphael.B ▴ 520
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1
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1.5k
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Comment: Comment: Python - Samtools mpileup find snps with allele frequency
22 months ago by raphael.B ▴ 520
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1
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1.5k
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Comment: Comment: Python - Samtools mpileup find snps with allele frequency
22 months ago by raphael.B ▴ 520
0
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1
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1.5k
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Comment: Comment: Python - Samtools mpileup find snps with allele frequency
22 months ago by raphael.B ▴ 520
0
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0
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895
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Comment: Comment: Snakemake error
2.2 years ago by raphael.B ▴ 520
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0
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1.2k
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Comment: Comment: How to extract gene name and transcript name from the INFO column of a VCF file
2.2 years ago by raphael.B ▴ 520
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0
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692
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Comment: Comment: How to compare vcf files and keep only their differencies ?
2.2 years ago by raphael.B ▴ 520
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0
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499
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Comment: Comment: Annotating a VCF ignoring ALT
2.2 years ago by raphael.B ▴ 520
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0
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824
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Comment: Comment: Snakemake cyclic dependency for gather operations
2.2 years ago by raphael.B ▴ 520
2
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1
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824
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Comment: Comment: Snakemake cyclic dependency for gather operations
2.2 years ago by raphael.B ▴ 520
1
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0
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1.7k
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Comment: Comment: mutation found in RNA seq data and not in DNA data
2.3 years ago by raphael.B ▴ 520
0
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1
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1.7k
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Comment: Comment: mutation found in RNA seq data and not in DNA data
2.3 years ago by raphael.B ▴ 520
1
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0
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616
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Comment: Comment: GATK QC where I start?
2.3 years ago by raphael.B ▴ 520
1
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0
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804
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Comment: Comment: Gene Length
2.4 years ago by raphael.B ▴ 520
41 results • Page 1 of 1
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