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2.5k
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Comment:
Comment: NGS forensics: how to know if data is fabricated
6 weeks ago by
benformatics
4.0k
2
votes
0
replies
2.5k
views
Comment:
Comment: NGS forensics: how to know if data is fabricated
6 weeks ago by
benformatics
4.0k
1
vote
0
replies
14k
views
Answer:
Answer: How Can We Find The Info For 3'Utr And 5'Utr In Gencode Gtf File?
7 weeks ago by
benformatics
4.0k
1
vote
0
replies
253
views
Answer:
Answer: Exon often targeted by mobile element insertions?
4 months ago by
benformatics
4.0k
0
votes
0
replies
326
views
GATK SelectVariants --remove-unused-alternates dropping real INDELs?
GATK
7 months ago by
benformatics
4.0k
0
votes
0
replies
530
views
Comment:
Comment: STAR GeneCounts for most genes are 0
7 months ago by
benformatics
4.0k
2
votes
1
reply
912
views
Answer:
Answer: Paired-end RNA seq (NextSeq2000): 1-3% if R2 reads are only contain G bases
7 months ago by
benformatics
4.0k
0
votes
0
replies
545
views
Comment:
Comment: unbiased clustering of these top 50 genes in seurat
7 months ago by
benformatics
4.0k
0
votes
0
replies
516
views
Answer:
Answer: How to plot two categorical variables in ggridges?
7 months ago by
benformatics
4.0k
1
vote
0
replies
516
views
Comment:
Comment: How to plot two categoric variables in ggridges?
7 months ago by
benformatics
4.0k
1
vote
1
reply
1.3k
views
Answer:
Answer: Map genome positions onto protein coordinates?
7 months ago by
benformatics
4.0k
1
vote
0
replies
609
views
Answer:
Answer: Get discordant read pairs from bam
8 months ago by
benformatics
4.0k
1
vote
1
reply
3.7k
views
Comment:
Comment: Why should ATAC-seq mapped reads be shifted +4 and -5 for +strand and -strand, r
8 months ago by
benformatics
4.0k
1
vote
1
reply
1.5k
views
Answer:
Answer: Discussion: Uploading terrabytes of data to NCBI SRA
9 months ago by
benformatics
4.0k
1
vote
0
replies
832
views
Answer:
Answer: insert size in bam file do not make sense
11 months ago by
benformatics
4.0k
5
votes
0
replies
1.3k
views
Answer:
Answer: How to import a gtf file in R so that it appears in tabular format as if it were
11 months ago by
benformatics
4.0k
1
vote
1
reply
511
views
Comment:
Comment: Assigning cell types to cells based on expression of cell surface markers
11 months ago by
benformatics
4.0k
0
votes
0
replies
937
views
Answer:
Answer: How to label clusters from a UMAP
11 months ago by
benformatics
4.0k
1
vote
0
replies
782
views
Comment:
Comment: Identify Alternative Splicing Event using exon and junction count table
11 months ago by
benformatics
4.0k
0
votes
1
reply
2.4k
views
Answer:
Answer: Remove short sequences with length < 50% from a multi-fasta file
11 months ago by
benformatics
4.0k
1
vote
0
replies
1.5k
views
Answer:
Answer: I want to rename sequence headers
updated 11 months ago by
Ram
44k • written 11 months ago by
benformatics
4.0k
0
votes
1
reply
1.1k
views
Comment:
Comment: Contig labels in BAM off by 1, how do I fix it?
11 months ago by
benformatics
4.0k
1
vote
1
reply
1.1k
views
Comment:
Comment: Contig labels in BAM off by 1, how do I fix it?
11 months ago by
benformatics
4.0k
0
votes
0
replies
2.0k
views
Comment:
Comment: monocle single cell differential expression: error message for HSMM <- estimateD
11 months ago by
benformatics
4.0k
0
votes
1
reply
1.0k
views
Comment:
Comment: gene id
11 months ago by
benformatics
4.0k
0
votes
1
reply
1.0k
views
Comment:
Comment: gene id
11 months ago by
benformatics
4.0k
0
votes
0
replies
580
views
Answer:
Answer: 3' Single Cell RNA Seq Reads mapping to promoter region of gene
11 months ago by
benformatics
4.0k
0
votes
0
replies
1.0k
views
Comment:
Comment: Analize RNA-seq data using Hisat2
12 months ago by
benformatics
4.0k
1
vote
0
replies
786
views
Comment:
Comment: Filtering mitochondrial reads from ATAC-Seq aligned reads- what to do with reads
12 months ago by
benformatics
4.0k
1
vote
0
replies
732
views
Comment:
Comment: Is the gene-specific PCR efficiency a serious concern for intrasample comparison
13 months ago by
benformatics
4.0k
0
votes
1
reply
1.1k
views
Comment:
Comment: error in Genome Mepping by BWA tools in Linux
13 months ago by
benformatics
4.0k
2
votes
0
replies
718
views
Answer:
Answer: Fastqs different lanes
13 months ago by
benformatics
4.0k
0
votes
0
replies
725
views
Comment:
Comment: Chance that DNA with 3N nucleotide encodes 2 protein with size of N amino-acids
13 months ago by
benformatics
4.0k
0
votes
0
replies
1.2k
views
Comment:
Comment: How do I project known tSNE coordinates onto SeuratObject
13 months ago by
benformatics
4.0k
1
vote
1
reply
1.2k
views
Answer:
Answer: How do I project known tSNE coordinates onto SeuratObject
13 months ago by
benformatics
4.0k
0
votes
1
reply
725
views
Comment:
Comment: Chance that DNA with 3N nucleotide encodes 2 protein with size of N amino-acids
13 months ago by
benformatics
4.0k
0
votes
1
reply
4.6k
views
Comment:
Comment: I want to correct the erroneous barcode file, and the Python code that I've writ
14 months ago by
benformatics
4.0k
1
vote
1
reply
4.6k
views
Comment:
Comment: I want to correct the erroneous barcode file, and the Python code that I've writ
14 months ago by
benformatics
4.0k
0
votes
0
replies
1.0k
views
Comment:
Comment: Remove string from Seurat object metadata
14 months ago by
benformatics
4.0k
0
votes
1
reply
1.0k
views
Answer:
Answer: Remove string from Seurat object metadata
14 months ago by
benformatics
4.0k
1
vote
1
reply
4.6k
views
Comment:
Comment: I want to correct the erroneous barcode file, and the Python code that I've writ
14 months ago by
benformatics
4.0k
0
votes
1
reply
4.6k
views
Comment:
Comment: What are the advantages of using the T2T as a reference vs GRCh38 today?
14 months ago by
benformatics
4.0k
0
votes
0
replies
594
views
Comment:
Comment: Merged BAM has more reads than sum of parts
14 months ago by
benformatics
4.0k
0
votes
1
reply
1.7k
views
Comment:
Comment: Can you swap reference genome releases ?
14 months ago by
benformatics
4.0k
0
votes
0
replies
667
views
Comment:
Comment: Non-zero expression counts from deleted genes
14 months ago by
benformatics
4.0k
0
votes
0
replies
778
views
Comment:
Comment: R script error R aborted or encountered a fatal error
14 months ago by
benformatics
4.0k
0
votes
1
reply
667
views
Comment:
Comment: Non-zero expression counts from deleted genes
14 months ago by
benformatics
4.0k
0
votes
0
replies
806
views
Answer:
Answer: divide coordinates into equal number of bins
14 months ago by
benformatics
4.0k
0
votes
0
replies
878
views
Answer:
Answer: How to get fraction of unspliced reads for specific gene from scRNAseq Cell Rang
14 months ago by
benformatics
4.0k
1
vote
0
replies
1.3k
views
Answer:
Answer: Recommendation for (Alternative) Splicing analysis packages for bulk RNA-seq da
15 months ago by
benformatics
4.0k
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