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Comment: Comment: is there any tool for SRA metadata analysis?
18 months ago by Buffo ★ 2.4k
3
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5
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1.3k
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is there any tool for SRA metadata analysis?
sratools eutilities sra
updated 18 months ago by ★ 6.2k • written 18 months ago by ★ 2.4k
1
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680
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Answer: Answer: BUSCO, Gene duplication
18 months ago by Buffo ★ 2.4k
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0
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824
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Comment: Comment: Different blast results between NR or local genome
18 months ago by Buffo ★ 2.4k
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0
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1.3k
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Answer: Answer: fastqc - typical for Illumina seq?
19 months ago by Buffo ★ 2.4k
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1
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1.2k
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Comment: Comment: How to combine eggnog and interproscan
19 months ago by Buffo ★ 2.4k
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0
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1.2k
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Comment: Comment: Multiple-way Reciprocal Best BLAST Hits
19 months ago by Buffo ★ 2.4k
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0
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546
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Answer: Answer: smallRNA profiling using HTSeq error
19 months ago by Buffo ★ 2.4k
1
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0
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471
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Answer: Answer: Calculating percentage TEs content (%) for a genome
19 months ago by Buffo ★ 2.4k
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0
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1.5k
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Comment: Comment: Using Specific Regions of Genome as Reference for Alignment Using STAR
19 months ago by Buffo ★ 2.4k
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1
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1.5k
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Answer: Answer: Using Specific Regions of Genome as Reference for Alignment Using STAR
19 months ago by Buffo ★ 2.4k
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0
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2.3k
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Comment: Comment: Speeding up minimap2
19 months ago by Buffo ★ 2.4k
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0
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527
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Answer: Answer: Filtering out useful targets for mirna
19 months ago by Buffo ★ 2.4k
0
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1
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2.3k
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Comment: Comment: Speeding up minimap2
19 months ago by Buffo ★ 2.4k
1
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0
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1.2k
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Answer: Answer: Assessing N50 and L50 while working on Genome assembly
19 months ago by Buffo ★ 2.4k
1
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0
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1.2k
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Comment: Comment: Assessing N50 and L50 while working on Genome assembly
19 months ago by Buffo ★ 2.4k
0
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0
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694
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Comment: Comment: GenCodeMismatch in .sqn file, is there any solution?
20 months ago by Buffo ★ 2.4k
0
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1
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694
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GenCodeMismatch in .sqn file, is there any solution?
ncbi annotation sqn
20 months ago by Buffo ★ 2.4k
1
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0
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1.0k
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Comment: Comment: Comparing reference genome assemblies of two plant varieties
22 months ago by Buffo ★ 2.4k
0
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1
reply
620
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Comment: Comment: QC Hi-C data
22 months ago by Buffo ★ 2.4k
0
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1
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830
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Comment: Comment: What is the maximum size of fasta file i can use for repeatmasker?
23 months ago by Buffo ★ 2.4k
0
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0
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876
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Comment: Comment: Which miRNA arm to select for target prediction, 3p or 5p?
23 months ago by Buffo ★ 2.4k
0
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1
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876
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Comment: Comment: Which miRNA arm to select for target prediction, 3p or 5p?
23 months ago by Buffo ★ 2.4k
0
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1
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876
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Comment: Comment: Which miRNA arm to select for target prediction, 3p or 5p?
23 months ago by Buffo ★ 2.4k
0
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1
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1.9k
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Comment: Comment: Using kraken2 to fish out only 16S reads
2.0 years ago by Buffo ★ 2.4k
0
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0
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544
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Comment: Comment: Tools for comparative analysis of eukaryotic genomic sequences
2.1 years ago by Buffo ★ 2.4k
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2
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1.6k
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Comment: Comment: Convert all fasta files in one folder
2.2 years ago by Buffo ★ 2.4k
0
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0
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554
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Comment: Comment: How do I search for miRNA target seeds using command line mirtarbase?
2.2 years ago by Buffo ★ 2.4k
1
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0
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899
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Comment: Comment: miRNA help
2.2 years ago by Buffo ★ 2.4k
1
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0
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759
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Answer: Answer: How to filter for evalue threshold in blastx output
2.2 years ago by Buffo ★ 2.4k
0
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0
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939
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Answer: Answer: Per base sequence quality - fastqc
2.3 years ago by Buffo ★ 2.4k
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0
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2.1k
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Comment: Comment: How to make hybrid assembly of a viral genome
2.5 years ago by Buffo ★ 2.4k
0
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1
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2.1k
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Comment: Comment: How to make hybrid assembly of a viral genome
2.5 years ago by Buffo ★ 2.4k
0
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1
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2.1k
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Comment: Comment: How to make hybrid assembly of a viral genome
2.5 years ago by Buffo ★ 2.4k
0
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1
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2.1k
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Comment: Comment: How to make hybrid assembly of a viral genome
2.5 years ago by Buffo ★ 2.4k
0
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1
reply
2.1k
views
Answer: Answer: How to make hybrid assembly of a viral genome
2.5 years ago by Buffo ★ 2.4k
0
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1
reply
1.3k
views
Comment: Comment: Create junctions from Bed file for IGV visualization
2.5 years ago by Buffo ★ 2.4k
1
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3
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1.3k
views
Create junctions from Bed file for IGV visualization
junctions bed igv
updated 2.5 years ago by 35k • written 2.5 years ago by ★ 2.4k
0
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0
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23k
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Comment: Comment: Building Snpeff Database
2.6 years ago by Buffo ★ 2.4k
0
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0
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733
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Comment: Comment: RNA-seq: Sequencing data has two coverages
2.6 years ago by Buffo ★ 2.4k
0
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1
reply
992
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Comment: Comment: exceRpt miRNA pipeline for paired-end RNA-seq data
2.7 years ago by Buffo ★ 2.4k
1
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0
replies
820
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Answer: Answer: Circos plot of dominant OTU with phylogenetic tree
2.7 years ago by Buffo ★ 2.4k
1
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0
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2.5k
views
Comment: Comment: Which files from PacBio output files to use in downstream analysis in R
2.7 years ago by Buffo ★ 2.4k
0
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1
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1.6k
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Comment: Comment: Is it possible to isolate and merge overlapping hits from a BLAST search Aligned
2.7 years ago by Buffo ★ 2.4k
1
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0
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912
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Comment: Comment: How to add metadata to dendrogram of hierarchical clustering in R
2.7 years ago by Buffo ★ 2.4k
0
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0
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813
views
IPD values from ipdsummary, methylation analysis using PacBio
methylation DNAsequencing IPD m4C m6A
2.8 years ago by Buffo ★ 2.4k
0
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0
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432
views
Splitting predicted transcripts according to ORF coordinates
transcript ORF RNAseq
3.0 years ago by Buffo ★ 2.4k
1
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1
reply
914
views
Comment: Comment: Heatmap from the coverage
3.1 years ago by Buffo ★ 2.4k
0
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0
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1.2k
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Comment: Comment: STAR alignment issue
3.1 years ago by Buffo ★ 2.4k
0
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0
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2.0k
views
Comment: Comment: How to quantify piRNAs ?
3.1 years ago by Buffo ★ 2.4k
465 results • Page 2 of 10
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