Entering edit mode
10.4 years ago
midox
▴
290
hello,
do you know of assembling long reads algorithms?
thank you for your reply
hello,
do you know of assembling long reads algorithms?
thank you for your reply
By long reads, do you mean PacBio reads? Pacific Biosciences has a nice overview of algorithms here: https://github.com/PacificBiosciences/Bioinformatics-Training/wiki/Large-Genome-Assembly-with-PacBio-Long-Reads
What Philipp said. Also, if you have high-confidence (low error rate) reads like Moleculo you could try using an overlap-graph-based assembler like Celera assembler, Newbler, etc.
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do you have other algorithms suggest me?
Just a comment: you should reply to an answer using the 'Add Comment' button, not by adding a new answer.
thank you for your reply
yes, but I need long reads assembly algorithms.