I have a bam file as well as a sample file that displays the frequency with which every base is read at each location. How do I convert these into a chromatogram file format so that I can view this using common chromatogram viewing tools? I have found converters from bam to fastq and some bioperl code that suggests conversion from fastq to scf however the latter step (Converting A Dna Sequence To Abi Or Scf Format) did not work. Thanks.
Question: how to obtain a scf or abi or similar file starting with a fastq file and the frequencies of the bases
6.1 years ago by
msapaydin • 0
msapaydin • 0 wrote:
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