Entering edit mode
9.9 years ago
Whoknows
▴
960
Hi
How can I set 1-based coordinate system for my bowtie output sam files?
thanks a lot,
Hi
How can I set 1-based coordinate system for my bowtie output sam files?
thanks a lot,
SAM files are always 1-based (BAM is 0-based).
I found the bowtie option , you should to set -B 1
for 1-based coordinate system
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thanks, and what is the parameter for bowtie?
-S