I am interested in using the tool BICseq for a CNV detection analysis. Unfortunately, I am writing you because I cannot solve a problem related to BICseq R package.
The R package is correctly installed and I am testing it on chr22 extracted from a in home BAM file. Running the function getBICseg with default parameters and a correctly generated bicseq object using the BICseq function, the following error is reported:
"Error in .C("sort_rms_binning", as.integer(sample), length(sample), as.integer(reference), : "sort_rms_binning" not resolved from current namespace (BICseq)"
Please, could you help me fixing the problem?
I am using the R version 3.0.1.
I found other posts related to this problem here but no answers.
Many thanks in advance!